RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 TOB2Q14106 344 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-216ENST00000570989 IQCB1Q15051 598 aa17.09■□□□□ 0.33
ITGA3-216ENST00000570989 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-216ENST00000570989 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-216ENST00000570989 MTX1Q13505 466 aa17.09■□□□□ 0.33
ITGA3-216ENST00000570989 NYAP1Q6ZVC0 841 aa17.09■□□□□ 0.33
ITGA3-216ENST00000570989 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
ITGA3-216ENST00000570989 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.33
ITGA3-216ENST00000570989 RBM6P78332 1123 aaKnown RBP17.08■□□□□ 0.33
ITGA3-216ENST00000570989 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.33
ITGA3-216ENST00000570989 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.33
ITGA3-216ENST00000570989 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.33
ITGA3-216ENST00000570989 LRRC8AQ8IWT6 810 aa17.08■□□□□ 0.33
ITGA3-216ENST00000570989 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.33
ITGA3-216ENST00000570989 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.33
ITGA3-216ENST00000570989 EVI5LQ96CN4 794 aa17.08■□□□□ 0.33
ITGA3-216ENST00000570989 FAM53CQ9NYF3 392 aa17.08■□□□□ 0.33
ITGA3-216ENST00000570989 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
ITGA3-216ENST00000570989 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.32
ITGA3-216ENST00000570989 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
ITGA3-216ENST00000570989 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
ITGA3-216ENST00000570989 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
ITGA3-216ENST00000570989 ZNF215Q9UL58 517 aaPredicted RBP17.08■□□□□ 0.32
ITGA3-216ENST00000570989 MRC1P22897 1456 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 SLC52A2Q9HAB3 445 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 CYP27B1O15528 508 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 ANXA1P04083 346 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 RPS6KB1P23443 525 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
ITGA3-216ENST00000570989 ZNF592Q92610 1267 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 ALDH8A1Q9H2A2 487 aaPredicted RBP17.07■□□□□ 0.32
ITGA3-216ENST00000570989 TMEM51Q9NW97 253 aa17.07■□□□□ 0.32
ITGA3-216ENST00000570989 PA2G4Q9UQ80 394 aaKnown RBP17.07■□□□□ 0.32
ITGA3-216ENST00000570989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
ITGA3-216ENST00000570989 PARP4Q9UKK3 1724 aaKnown RBP17.06■□□□□ 0.32
ITGA3-216ENST00000570989 RESTQ13127 1097 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 ZNF397Q8NF99 534 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-216ENST00000570989 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-216ENST00000570989 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-216ENST00000570989 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-216ENST00000570989 PSMA5P28066 241 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 KCNJ4P48050 445 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 TERF2Q15554 542 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 BLOC1S2Q6QNY1 142 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-216ENST00000570989 BICD2Q8TD16 824 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
ITGA3-216ENST00000570989 CCZ1BP86790 482 aa17.05■□□□□ 0.32
ITGA3-216ENST00000570989 CCZ1P86791 482 aaPredicted RBP17.05■□□□□ 0.32
ITGA3-216ENST00000570989 C5P01031 1676 aa17.05■□□□□ 0.32
ITGA3-216ENST00000570989 MED23Q9ULK4 1368 aa17.05■□□□□ 0.32
ITGA3-216ENST00000570989 JAK2O60674 1132 aa17.05■□□□□ 0.32
ITGA3-216ENST00000570989 BRD2P25440 801 aaKnown RBP17.05■□□□□ 0.32
ITGA3-216ENST00000570989 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
ITGA3-216ENST00000570989 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
ITGA3-216ENST00000570989 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.05■□□□□ 0.32
ITGA3-216ENST00000570989 V9GYY5 206 aaPredicted RBP17.05■□□□□ 0.32
ITGA3-216ENST00000570989 CAVIN2O95810 425 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 IFIT2P09913 472 aaKnown RBP17.04■□□□□ 0.32
ITGA3-216ENST00000570989 STK3Q13188 491 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 KRT222Q8N1A0 295 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 MYH15Q9Y2K3 1946 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 FBXO38Q6PIJ6 1188 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 AACSQ86V21 672 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
ITGA3-216ENST00000570989 SKILP12757 684 aa17.03■□□□□ 0.32
ITGA3-216ENST00000570989 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
ITGA3-216ENST00000570989 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
ITGA3-216ENST00000570989 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
ITGA3-216ENST00000570989 NEMFO60524 1076 aa17.03■□□□□ 0.32
ITGA3-216ENST00000570989 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
ITGA3-216ENST00000570989 ELF2Q15723 593 aa17.02■□□□□ 0.32
ITGA3-216ENST00000570989 BRF1Q92994 677 aa17.02■□□□□ 0.32
ITGA3-216ENST00000570989 CCDC69A6NI79 296 aa17.02■□□□□ 0.31
ITGA3-216ENST00000570989 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.31
ITGA3-216ENST00000570989 GTF3C6Q969F1 213 aa17.02■□□□□ 0.31
ITGA3-216ENST00000570989 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.31
ITGA3-216ENST00000570989 DDX11Q96FC9 970 aa17.02■□□□□ 0.31
ITGA3-216ENST00000570989 HIP1O00291 1037 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 SASH1O94885 1247 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
ITGA3-216ENST00000570989 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 SLFNL1Q499Z3 407 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 ERC1Q8IUD2 1116 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 DHX40Q8IX18 779 aaKnown RBP17.01■□□□□ 0.31
ITGA3-216ENST00000570989 CCAR2Q8N163 923 aaKnown RBP17.01■□□□□ 0.31
ITGA3-216ENST00000570989 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 KCND1Q9NSA2 647 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 ZNF446Q9NWS9 450 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
ITGA3-216ENST00000570989 A0A087WWV3 80 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 GOLGA6L19H0YKK7 550 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
ITGA3-216ENST00000570989 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms