RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 TICAM2Q86XR7 235 aa23.61■■□□□ 1.37
SPNS2-203ENST00000570979 CD2BP2O95400 341 aaKnown RBP23.6■■□□□ 1.37
SPNS2-203ENST00000570979 PRR5LQ6MZQ0 368 aa23.6■■□□□ 1.37
SPNS2-203ENST00000570979 CLEC17AQ6ZS10 378 aa23.6■■□□□ 1.37
SPNS2-203ENST00000570979 CCDC191Q8NCU4 936 aa23.6■■□□□ 1.37
SPNS2-203ENST00000570979 ARFGEF2Q9Y6D5 1785 aa23.6■■□□□ 1.37
SPNS2-203ENST00000570979 HSPA4P34932 840 aa23.59■■□□□ 1.37
SPNS2-203ENST00000570979 ZNF526Q8TF50 670 aaPredicted RBP23.59■■□□□ 1.37
SPNS2-203ENST00000570979 CWC25Q9NXE8 425 aaPredicted RBP23.59■■□□□ 1.37
SPNS2-203ENST00000570979 NEK4P51957 841 aa23.58■■□□□ 1.37
SPNS2-203ENST00000570979 SETDB2Q96T68 719 aa23.58■■□□□ 1.37
SPNS2-203ENST00000570979 DLEC1Q9Y238 1755 aa23.58■■□□□ 1.37
SPNS2-203ENST00000570979 H7C1W4 665 aa23.57■■□□□ 1.36
SPNS2-203ENST00000570979 C2CD5Q86YS7 1000 aa23.57■■□□□ 1.36
SPNS2-203ENST00000570979 FAM43AQ8N2R8 423 aa23.57■■□□□ 1.36
SPNS2-203ENST00000570979 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
SPNS2-203ENST00000570979 RAD50Q92878 1312 aa23.57■■□□□ 1.36
SPNS2-203ENST00000570979 SASH1O94885 1247 aa23.57■■□□□ 1.36
SPNS2-203ENST00000570979 TNPO1Q92973 898 aaKnown RBP23.57■■□□□ 1.36
SPNS2-203ENST00000570979 INTS4Q96HW7 963 aaKnown RBP23.56■■□□□ 1.36
SPNS2-203ENST00000570979 RTN4Q9NQC3 1192 aaKnown RBP23.56■■□□□ 1.36
SPNS2-203ENST00000570979 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.56■■□□□ 1.36
SPNS2-203ENST00000570979 C1QTNF8P60827 252 aa23.55■■□□□ 1.36
SPNS2-203ENST00000570979 HLFQ16534 295 aa23.55■■□□□ 1.36
SPNS2-203ENST00000570979 UBE3BQ7Z3V4 1068 aa23.55■■□□□ 1.36
SPNS2-203ENST00000570979 L1TD1Q5T7N2 865 aaKnown RBP23.55■■□□□ 1.36
SPNS2-203ENST00000570979 CLEC4GQ6UXB4 293 aa23.55■■□□□ 1.36
SPNS2-203ENST00000570979 COL11A2P13942 1736 aaPredicted RBP23.54■■□□□ 1.36
SPNS2-203ENST00000570979 CNBD1Q8NA66 436 aa23.54■■□□□ 1.36
SPNS2-203ENST00000570979 BRIP1Q9BX63 1249 aa23.54■■□□□ 1.36
SPNS2-203ENST00000570979 ISY1Q9ULR0 285 aaKnown RBP23.54■■□□□ 1.36
SPNS2-203ENST00000570979 H0YIN7 160 aa23.53■■□□□ 1.36
SPNS2-203ENST00000570979 TRIM28Q13263 835 aaKnown RBP23.53■■□□□ 1.36
SPNS2-203ENST00000570979 EAF2Q96CJ1 260 aaPredicted RBP23.53■■□□□ 1.36
SPNS2-203ENST00000570979 GPBP1L1Q9HC44 474 aaPredicted RBP23.53■■□□□ 1.36
SPNS2-203ENST00000570979 TRAK2O60296 914 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 TTLL7Q6ZT98 887 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 TTLL6Q8N841 843 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 GPR108Q9NPR9 543 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 FBXO3Q9UK99 471 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 RFX5P48382 616 aaPredicted RBP23.52■■□□□ 1.36
SPNS2-203ENST00000570979 CASP7P55210 303 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 C9orf131Q5VYM1 1079 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 KIF6Q6ZMV9 814 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 ZNF652Q9Y2D9 606 aa23.52■■□□□ 1.36
SPNS2-203ENST00000570979 RFX7Q2KHR2 1363 aa23.51■■□□□ 1.35
SPNS2-203ENST00000570979 PTPN12Q05209 780 aaKnown RBP23.51■■□□□ 1.35
SPNS2-203ENST00000570979 LSG1Q9H089 658 aaKnown RBP23.51■■□□□ 1.35
SPNS2-203ENST00000570979 NIP7Q9Y221 180 aaKnown RBP eCLIP23.51■■□□□ 1.35
SPNS2-203ENST00000570979 SBF1O95248 1867 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 ATP5J2-PTCD1G3V325 749 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 ATP5JP18859 108 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 HSP90AB3PQ58FF7 597 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 MAP4K4O95819 1239 aaPredicted RBP23.5■■□□□ 1.35
SPNS2-203ENST00000570979 PDE6BP35913 854 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 RASSF7Q02833 373 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 CUL4AQ13619 759 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 EPHA10Q5JZY3 1008 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 CWC27Q6UX04 472 aaKnown RBP23.5■■□□□ 1.35
SPNS2-203ENST00000570979 NBPF5PQ86XG9 351 aaPredicted RBP23.5■■□□□ 1.35
SPNS2-203ENST00000570979 ZNF622Q969S3 477 aaKnown RBP eCLIP23.5■■□□□ 1.35
SPNS2-203ENST00000570979 SNRKQ9NRH2 765 aa23.5■■□□□ 1.35
SPNS2-203ENST00000570979 FAM177BA6PVY3 158 aa23.49■■□□□ 1.35
SPNS2-203ENST00000570979 NPHP1O15259 732 aa23.49■■□□□ 1.35
SPNS2-203ENST00000570979 TM6SF1Q9BZW5 370 aa23.49■■□□□ 1.35
SPNS2-203ENST00000570979 SIL1Q9H173 461 aa23.49■■□□□ 1.35
SPNS2-203ENST00000570979 RGL2O15211 777 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 ZKSCAN1P17029 563 aaPredicted RBP23.48■■□□□ 1.35
SPNS2-203ENST00000570979 IL15P40933 162 aaPredicted RBP23.48■■□□□ 1.35
SPNS2-203ENST00000570979 PRELPP51888 382 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 ST5P78524 1137 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 TCIRG1Q13488 830 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 TNNI3KQ59H18 835 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 TMX3Q96JJ7 454 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 FPGT-TNNI3KV9GXZ4 949 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 NUP98P52948 1817 aa23.48■■□□□ 1.35
SPNS2-203ENST00000570979 GLIPR1L2Q4G1C9 344 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 RNF20Q5VTR2 975 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 LMBR1LQ6UX01 489 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 CCDC8Q9H0W5 538 aaPredicted RBP23.47■■□□□ 1.35
SPNS2-203ENST00000570979 MAP3K15Q6ZN16 1313 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 CIAO1O76071 339 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 ISCA1Q9BUE6 129 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 FOXD4L1Q9NU39 408 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 RNF181Q9P0P0 153 aa23.47■■□□□ 1.35
SPNS2-203ENST00000570979 ERVV-1B6SEH8 477 aa23.46■■□□□ 1.35
SPNS2-203ENST00000570979 FOXO4P98177 505 aa23.46■■□□□ 1.35
SPNS2-203ENST00000570979 KCNB2Q92953 911 aa23.46■■□□□ 1.35
SPNS2-203ENST00000570979 ZBTB3Q9H5J0 574 aa23.46■■□□□ 1.35
SPNS2-203ENST00000570979 ZNF219Q9P2Y4 722 aaPredicted RBP23.46■■□□□ 1.35
SPNS2-203ENST00000570979 SRGNP10124 158 aa23.45■■□□□ 1.34
SPNS2-203ENST00000570979 PDIA4P13667 645 aaKnown RBP23.45■■□□□ 1.34
SPNS2-203ENST00000570979 FSD1Q9BTV5 496 aa23.45■■□□□ 1.34
SPNS2-203ENST00000570979 KIF3CO14782 793 aa23.45■■□□□ 1.34
SPNS2-203ENST00000570979 CYP2E1P05181 493 aaPredicted RBP23.45■■□□□ 1.34
SPNS2-203ENST00000570979 PSMA5P28066 241 aa23.45■■□□□ 1.34
SPNS2-203ENST00000570979 SLX4Q8IY92 1834 aa23.45■■□□□ 1.34
SPNS2-203ENST00000570979 PALD1Q9ULE6 856 aa23.45■■□□□ 1.34
SPNS2-203ENST00000570979 NFKBIEO00221 500 aa23.44■■□□□ 1.34
SPNS2-203ENST00000570979 SNX14Q9Y5W7 946 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms