RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 CDC37L1Q7L3B6 337 aa19.07■□□□□ 0.64
NDE1-203ENST00000570727 SAMD7Q7Z3H4 446 aa19.07■□□□□ 0.64
NDE1-203ENST00000570727 TSR2Q969E8 191 aaKnown RBP19.07■□□□□ 0.64
NDE1-203ENST00000570727 EYA3Q99504 573 aa19.07■□□□□ 0.64
NDE1-203ENST00000570727 RTL9Q8NET4 1388 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 ECE2O60344 883 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 DDX58O95786 925 aaKnown RBP19.06■□□□□ 0.64
NDE1-203ENST00000570727 EGFRP00533 1210 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 CCDC152Q4G0S7 254 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 PAXIP1Q6ZW49 1069 aaPredicted RBP19.06■□□□□ 0.64
NDE1-203ENST00000570727 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 MAP3K2Q9Y2U5 619 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 THSD7BQ9C0I4 1608 aa19.06■□□□□ 0.64
NDE1-203ENST00000570727 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 GRM1Q13255 1194 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 DLK2Q6UY11 383 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 KSR2Q6VAB6 950 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
NDE1-203ENST00000570727 CCDC85AQ96PX6 553 aaPredicted RBP19.05■□□□□ 0.64
NDE1-203ENST00000570727 ZC3H12CQ9C0D7 883 aaKnown RBP19.05■□□□□ 0.64
NDE1-203ENST00000570727 PI4KAP2A4QPH2 592 aa19.04■□□□□ 0.64
NDE1-203ENST00000570727 AOC2O75106 756 aa19.04■□□□□ 0.64
NDE1-203ENST00000570727 VIL1P09327 827 aaKnown RBP19.04■□□□□ 0.64
NDE1-203ENST00000570727 RPS12P25398 132 aaKnown RBP19.04■□□□□ 0.64
NDE1-203ENST00000570727 TBC1D10BQ4KMP7 808 aaPredicted RBP19.04■□□□□ 0.64
NDE1-203ENST00000570727 PI4KAP1Q8N8J0 262 aa19.04■□□□□ 0.64
NDE1-203ENST00000570727 UFL1O94874 794 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 MAP2K2P36507 400 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 G2E3Q7L622 706 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 HHIPL1Q96JK4 782 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 ZNF408Q9H9D4 720 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 ANKIB1Q9P2G1 1089 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 GGA1Q9UJY5 639 aa19.03■□□□□ 0.64
NDE1-203ENST00000570727 WTIPA6NIX2 430 aaPredicted RBP19.01■□□□□ 0.63
NDE1-203ENST00000570727 TWISTNBQ3B726 338 aaPredicted RBP19.01■□□□□ 0.63
NDE1-203ENST00000570727 RBM26Q5T8P6 1007 aaKnown RBP19.01■□□□□ 0.63
NDE1-203ENST00000570727 ANKRD18AQ8IVF6 992 aa19.01■□□□□ 0.63
NDE1-203ENST00000570727 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
NDE1-203ENST00000570727 SLC4A2P04920 1241 aa19■□□□□ 0.63
NDE1-203ENST00000570727 CTSWP56202 376 aa19■□□□□ 0.63
NDE1-203ENST00000570727 STK31Q9BXU1 1019 aa19■□□□□ 0.63
NDE1-203ENST00000570727 MYH3P11055 1940 aa19■□□□□ 0.63
NDE1-203ENST00000570727 IL16Q14005 1332 aa19■□□□□ 0.63
NDE1-203ENST00000570727 NEURL1BA8MQ27 555 aa18.99■□□□□ 0.63
NDE1-203ENST00000570727 G3V3G9 751 aa18.99■□□□□ 0.63
NDE1-203ENST00000570727 H7C1W4 665 aa18.99■□□□□ 0.63
NDE1-203ENST00000570727 CWF19L2Q2TBE0 894 aaKnown RBP18.99■□□□□ 0.63
NDE1-203ENST00000570727 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
NDE1-203ENST00000570727 DCAF8Q5TAQ9 597 aa18.99■□□□□ 0.63
NDE1-203ENST00000570727 XDHP47989 1333 aa18.99■□□□□ 0.63
NDE1-203ENST00000570727 PSME4Q14997 1843 aa18.98■□□□□ 0.63
NDE1-203ENST00000570727 ATP2B4P23634 1241 aa18.98■□□□□ 0.63
NDE1-203ENST00000570727 KRT26Q7Z3Y9 468 aa18.98■□□□□ 0.63
NDE1-203ENST00000570727 BEGAINQ9BUH8 593 aa18.98■□□□□ 0.63
NDE1-203ENST00000570727 GREM2Q9H772 168 aa18.98■□□□□ 0.63
NDE1-203ENST00000570727 MINPP1Q9UNW1 487 aa18.98■□□□□ 0.63
NDE1-203ENST00000570727 ZNF280AP59817 542 aaPredicted RBP18.97■□□□□ 0.63
NDE1-203ENST00000570727 NEXNQ0ZGT2 675 aa18.97■□□□□ 0.63
NDE1-203ENST00000570727 KIF4BQ2VIQ3 1234 aa18.97■□□□□ 0.63
NDE1-203ENST00000570727 RSBN1LQ6PCB5 846 aaPredicted RBP18.97■□□□□ 0.63
NDE1-203ENST00000570727 DCPSQ96C86 337 aaKnown RBP18.97■□□□□ 0.63
NDE1-203ENST00000570727 ZIC5Q96T25 663 aa18.97■□□□□ 0.63
NDE1-203ENST00000570727 GMLQ99445 158 aa18.97■□□□□ 0.63
NDE1-203ENST00000570727 CDC5LQ99459 802 aaKnown RBP18.97■□□□□ 0.63
NDE1-203ENST00000570727 BSDC1Q9NW68 430 aaPredicted RBP18.97■□□□□ 0.63
NDE1-203ENST00000570727 ASTN2O75129 1339 aaPredicted RBP18.97■□□□□ 0.63
NDE1-203ENST00000570727 SPEF2Q9C093 1822 aa18.96■□□□□ 0.63
NDE1-203ENST00000570727 CACNA1FO60840 1977 aa18.96■□□□□ 0.63
NDE1-203ENST00000570727 ADM5C9JUS6 153 aa18.96■□□□□ 0.63
NDE1-203ENST00000570727 HUNKP57058 714 aa18.96■□□□□ 0.63
NDE1-203ENST00000570727 AGBL3Q8NEM8 1001 aa18.96■□□□□ 0.63
NDE1-203ENST00000570727 TSKSQ9UJT2 592 aa18.96■□□□□ 0.63
NDE1-203ENST00000570727 ZNF609O15014 1411 aa18.95■□□□□ 0.62
NDE1-203ENST00000570727 BRPF1P55201 1214 aaPredicted RBP18.95■□□□□ 0.62
NDE1-203ENST00000570727 VAMP4O75379 141 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 CASP7P55210 303 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 FLIIQ13045 1269 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 GCKRQ14397 625 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 UBE3BQ7Z3V4 1068 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 PODNQ7Z5L7 613 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 GBA2Q9HCG7 927 aaPredicted RBP18.94■□□□□ 0.62
NDE1-203ENST00000570727 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 GGA3Q9NZ52 723 aa18.94■□□□□ 0.62
NDE1-203ENST00000570727 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 FAM155AB1AL88 458 aaPredicted RBP18.93■□□□□ 0.62
NDE1-203ENST00000570727 SCARF1Q14162 830 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 ABHD8Q96I13 439 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 PLA2G12BQ9BX93 195 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 SALL2Q9Y467 1007 aaPredicted RBP18.93■□□□□ 0.62
NDE1-203ENST00000570727 CASP8AP2Q9UKL3 1982 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
NDE1-203ENST00000570727 CA12O43570 354 aa18.92■□□□□ 0.62
NDE1-203ENST00000570727 CSF1RP07333 972 aa18.92■□□□□ 0.62
NDE1-203ENST00000570727 CCT4P50991 539 aaKnown RBP18.92■□□□□ 0.62
NDE1-203ENST00000570727 NOGQ13253 232 aa18.92■□□□□ 0.62
NDE1-203ENST00000570727 RGMBQ6NW40 437 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms