RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 DCPSQ96C86 337 aaKnown RBP9.65□□□□□ -0.86
SMG6-205ENST00000570659 GMLQ99445 158 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
SMG6-205ENST00000570659 SSC5DA1L4H1 1573 aa9.64□□□□□ -0.87
SMG6-205ENST00000570659 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
SMG6-205ENST00000570659 ZNF280AP59817 542 aaPredicted RBP9.64□□□□□ -0.87
SMG6-205ENST00000570659 WASHC4Q2M389 1173 aa9.64□□□□□ -0.87
SMG6-205ENST00000570659 NBPF9Q3BBW0 867 aa9.64□□□□□ -0.87
SMG6-205ENST00000570659 NSFL1CQ9UNZ2 370 aaKnown RBP9.64□□□□□ -0.87
SMG6-205ENST00000570659 AOX1Q06278 1338 aa9.63□□□□□ -0.87
SMG6-205ENST00000570659 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
SMG6-205ENST00000570659 TM4SF4P48230 202 aa9.63□□□□□ -0.87
SMG6-205ENST00000570659 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMG6-205ENST00000570659 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
SMG6-205ENST00000570659 RTL5Q5HYW3 569 aaPredicted RBP9.63□□□□□ -0.87
SMG6-205ENST00000570659 OTOP1Q7RTM1 612 aa9.63□□□□□ -0.87
SMG6-205ENST00000570659 SULF1Q8IWU6 871 aa9.63□□□□□ -0.87
SMG6-205ENST00000570659 TBC1D16Q8TBP0 767 aa9.63□□□□□ -0.87
SMG6-205ENST00000570659 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
SMG6-205ENST00000570659 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 IGF2BP3O00425 579 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMG6-205ENST00000570659 AIMP1Q12904 312 aaKnown RBP9.62□□□□□ -0.87
SMG6-205ENST00000570659 PRKG1Q13976 671 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 PPP1R42Q7Z4L9 355 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 PCDHAC2Q9Y5I4 1007 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 A0A0C4DFX4 3053 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 LAMB1P07942 1786 aa9.62□□□□□ -0.87
SMG6-205ENST00000570659 H0YGN5 161 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 FKTNO75072 461 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 EIF2S2P20042 333 aaKnown RBP9.61□□□□□ -0.87
SMG6-205ENST00000570659 GJA5P36382 358 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 PKN2Q16513 984 aaKnown RBP9.61□□□□□ -0.87
SMG6-205ENST00000570659 PARP10Q53GL7 1025 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 DDX46Q7L014 1031 aaKnown RBP9.61□□□□□ -0.87
SMG6-205ENST00000570659 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 RTF1Q92541 710 aaKnown RBP9.61□□□□□ -0.87
SMG6-205ENST00000570659 JARID2Q92833 1246 aaPredicted RBP9.61□□□□□ -0.87
SMG6-205ENST00000570659 GCC1Q96CN9 775 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 CLMNQ96JQ2 1002 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 PLEKHF1Q96S99 279 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
SMG6-205ENST00000570659 TRIM17Q9Y577 477 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 ZNF609O15014 1411 aa9.61□□□□□ -0.87
SMG6-205ENST00000570659 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
SMG6-205ENST00000570659 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
SMG6-205ENST00000570659 PPP2R1AP30153 589 aa9.6□□□□□ -0.87
SMG6-205ENST00000570659 CD99L2Q8TCZ2 262 aa9.6□□□□□ -0.87
SMG6-205ENST00000570659 MYOZ2Q9NPC6 264 aa9.6□□□□□ -0.87
SMG6-205ENST00000570659 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
SMG6-205ENST00000570659 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 SPEF2Q9C093 1822 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 DLL1O00548 723 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 SASH1O94885 1247 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 MYCP01106 439 aaPredicted RBP9.59□□□□□ -0.87
SMG6-205ENST00000570659 TCIRG1Q13488 830 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 NOM1Q5C9Z4 860 aaKnown RBP9.59□□□□□ -0.87
SMG6-205ENST00000570659 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
SMG6-205ENST00000570659 CFHR5Q9BXR6 569 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 OTOFQ9HC10 1997 aa9.59□□□□□ -0.87
SMG6-205ENST00000570659 LAMA3Q16787 3333 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 SOX1O00570 391 aaPredicted RBP9.58□□□□□ -0.88
SMG6-205ENST00000570659 HTATSF1O43719 755 aaKnown RBP9.58□□□□□ -0.88
SMG6-205ENST00000570659 KLRK1P26718 216 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 SF3B3Q15393 1217 aaKnown RBP9.58□□□□□ -0.88
SMG6-205ENST00000570659 LDLRAD1Q5T700 205 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 SPRYD7Q5W111 196 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 ARMC5Q96C12 935 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
SMG6-205ENST00000570659 PTPN18Q99952 460 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
SMG6-205ENST00000570659 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 PTPN22Q9Y2R2 807 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 CUL9Q8IWT3 2517 aa9.58□□□□□ -0.88
SMG6-205ENST00000570659 WNT10BO00744 389 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 UFL1O94874 794 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 CRHR2Q13324 411 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 IFNL1Q8IU54 200 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 ISCA1Q9BUE6 129 aa9.57□□□□□ -0.88
SMG6-205ENST00000570659 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 FKBP1BP68106 108 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 TTLL12Q14166 644 aaPredicted RBP9.56□□□□□ -0.88
SMG6-205ENST00000570659 CDAN1Q8IWY9 1227 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 ZBED3Q96IU2 234 aaPredicted RBP9.56□□□□□ -0.88
SMG6-205ENST00000570659 ZNF333Q96JL9 665 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 TMX4Q9H1E5 349 aaPredicted RBP9.56□□□□□ -0.88
SMG6-205ENST00000570659 PRO3102Q9H379 93 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 PITPNM2Q9BZ72 1349 aa9.56□□□□□ -0.88
SMG6-205ENST00000570659 RPS8P62241 208 aaKnown RBP9.55□□□□□ -0.88
SMG6-205ENST00000570659 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 REM2Q8IYK8 340 aaPredicted RBP9.55□□□□□ -0.88
SMG6-205ENST00000570659 AGBL3Q8NEM8 1001 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 CNKSR2Q8WXI2 1034 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms