RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 PGAP2Q9UHJ9 254 aa21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CNTNAP1P78357 1384 aa21.83■■□□□ 1.08
MAP1LC3B-208ENST00000570189 C6orf229H3BNL8 230 aa21.82■■□□□ 1.08
MAP1LC3B-208ENST00000570189 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
MAP1LC3B-208ENST00000570189 XDHP47989 1333 aa21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 RAD17O75943 681 aa21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 RPS12P25398 132 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 UBE3BQ7Z3V4 1068 aa21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 ZC3H15Q8WU90 426 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 BSDC1Q9NW68 430 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 GGA1Q9UJY5 639 aa21.81■■□□□ 1.08
MAP1LC3B-208ENST00000570189 ECE2O60344 883 aa21.8■■□□□ 1.08
MAP1LC3B-208ENST00000570189 ZNF646O15015 1829 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3B-208ENST00000570189 CSF1RP07333 972 aa21.79■■□□□ 1.08
MAP1LC3B-208ENST00000570189 ZC3H12CQ9C0D7 883 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3B-208ENST00000570189 GREM2Q9H772 168 aa21.79■■□□□ 1.08
MAP1LC3B-208ENST00000570189 DBNDD1Q9H9R9 158 aa21.79■■□□□ 1.08
MAP1LC3B-208ENST00000570189 ANKIB1Q9P2G1 1089 aa21.79■■□□□ 1.08
MAP1LC3B-208ENST00000570189 RASSF10A6NK89 507 aa21.78■■□□□ 1.08
MAP1LC3B-208ENST00000570189 PSMD14O00487 310 aa21.78■■□□□ 1.08
MAP1LC3B-208ENST00000570189 UFL1O94874 794 aa21.78■■□□□ 1.08
MAP1LC3B-208ENST00000570189 BCL2L13Q9BXK5 485 aa21.78■■□□□ 1.08
MAP1LC3B-208ENST00000570189 A0A1B0GUL6 1792 aa21.77■■□□□ 1.08
MAP1LC3B-208ENST00000570189 ATP2B4P23634 1241 aa21.77■■□□□ 1.08
MAP1LC3B-208ENST00000570189 BEND3Q5T5X7 828 aa21.77■■□□□ 1.08
MAP1LC3B-208ENST00000570189 CCDC85AQ96PX6 553 aaPredicted RBP21.77■■□□□ 1.08
MAP1LC3B-208ENST00000570189 CNOT7Q9UIV1 285 aaKnown RBP21.77■■□□□ 1.08
MAP1LC3B-208ENST00000570189 THSD7BQ9C0I4 1608 aa21.77■■□□□ 1.07
MAP1LC3B-208ENST00000570189 MED23Q9ULK4 1368 aa21.76■■□□□ 1.07
MAP1LC3B-208ENST00000570189 RIMBP2O15034 1052 aa21.76■■□□□ 1.07
MAP1LC3B-208ENST00000570189 VIL1P09327 827 aaKnown RBP21.76■■□□□ 1.07
MAP1LC3B-208ENST00000570189 MINPP1Q9UNW1 487 aa21.76■■□□□ 1.07
MAP1LC3B-208ENST00000570189 H7C1D1 291 aa21.75■■□□□ 1.07
MAP1LC3B-208ENST00000570189 HIRAP54198 1017 aaPredicted RBP21.75■■□□□ 1.07
MAP1LC3B-208ENST00000570189 POLR2AP24928 1970 aaKnown RBP21.74■■□□□ 1.07
MAP1LC3B-208ENST00000570189 E9PSI1 815 aa21.74■■□□□ 1.07
MAP1LC3B-208ENST00000570189 PODNQ7Z5L7 613 aa21.74■■□□□ 1.07
MAP1LC3B-208ENST00000570189 MICALL2Q8IY33 904 aa21.74■■□□□ 1.07
MAP1LC3B-208ENST00000570189 MKRN1Q9UHC7 482 aaKnown RBP21.74■■□□□ 1.07
MAP1LC3B-208ENST00000570189 ALDH1L1O75891 902 aa21.73■■□□□ 1.07
MAP1LC3B-208ENST00000570189 ITGA6P23229 1130 aa21.73■■□□□ 1.07
MAP1LC3B-208ENST00000570189 DOK7Q18PE1 504 aa21.73■■□□□ 1.07
MAP1LC3B-208ENST00000570189 IFFO2Q5TF58 517 aa21.73■■□□□ 1.07
MAP1LC3B-208ENST00000570189 TRPM4Q8TD43 1214 aa21.73■■□□□ 1.07
MAP1LC3B-208ENST00000570189 GPR101Q96P66 508 aaPredicted RBP21.73■■□□□ 1.07
MAP1LC3B-208ENST00000570189 F6X3S4 739 aa21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 CCER2I3L3R5 266 aa21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 IGHMBP2P38935 993 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 CCT4P50991 539 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 FAM161AQ3B820 660 aa21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 AGBL3Q8NEM8 1001 aa21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 KCNQ5Q9NR82 932 aa21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 ZBTB12Q9Y330 459 aaPredicted RBP21.72■■□□□ 1.07
MAP1LC3B-208ENST00000570189 HSPA1AP0DMV8 641 aaKnown RBP21.71■■□□□ 1.07
MAP1LC3B-208ENST00000570189 HSPA1BP0DMV9 641 aaKnown RBP21.71■■□□□ 1.07
MAP1LC3B-208ENST00000570189 FOXO4P98177 505 aa21.71■■□□□ 1.07
MAP1LC3B-208ENST00000570189 LEMD3Q9Y2U8 911 aa21.71■■□□□ 1.07
MAP1LC3B-208ENST00000570189 SHTN1A0MZ66 631 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 GRM8O00222 908 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 VEGFBP49765 207 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 DEFB115Q30KQ5 88 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 CST9Q5W186 159 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 CDC37L1Q7L3B6 337 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 GMLQ99445 158 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 ANKRD2Q9GZV1 360 aa21.7■■□□□ 1.06
MAP1LC3B-208ENST00000570189 ZNF280AP59817 542 aaPredicted RBP21.69■■□□□ 1.06
MAP1LC3B-208ENST00000570189 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
MAP1LC3B-208ENST00000570189 TLL2Q9Y6L7 1015 aa21.69■■□□□ 1.06
MAP1LC3B-208ENST00000570189 G3V3G9 751 aa21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 TRAF5O00463 557 aa21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 DCAF8Q5TAQ9 597 aa21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 RSBN1LQ6PCB5 846 aaPredicted RBP21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 HHIPL1Q96JK4 782 aa21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 MPHOSPH8Q99549 860 aa21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 UTYO14607 1347 aa21.68■■□□□ 1.06
MAP1LC3B-208ENST00000570189 PTPRCP08575 1304 aa21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 ANKRD18BA2A2Z9 1011 aa21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 FMR1Q06787 632 aaKnown RBP eCLIP21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 SAMD7Q7Z3H4 446 aa21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 TRMT2AQ8IZ69 625 aaKnown RBP21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 GLIS2Q9BZE0 524 aaPredicted RBP21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 SRCIN1Q9C0H9 1055 aa21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 COA1Q9GZY4 146 aa21.67■■□□□ 1.06
MAP1LC3B-208ENST00000570189 USP17L3A6NCW0 530 aa21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 USP17L4A6NCW7 530 aa21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 MMP14P50281 582 aa21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 IFIT5Q13325 482 aaKnown RBP21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 C15orf52Q6ZUT6 534 aaKnown RBP21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 USP17L1Q7RTZ2 530 aa21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 MRPL50Q8N5N7 158 aaKnown RBP21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 ABT1Q9ULW3 272 aaKnown RBP21.66■■□□□ 1.06
MAP1LC3B-208ENST00000570189 ZNF804BA4D1E1 1349 aa21.65■■□□□ 1.06
MAP1LC3B-208ENST00000570189 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
MAP1LC3B-208ENST00000570189 WTIPA6NIX2 430 aaPredicted RBP21.65■■□□□ 1.06
MAP1LC3B-208ENST00000570189 EGFRP00533 1210 aa21.65■■□□□ 1.06
MAP1LC3B-208ENST00000570189 MYO3BQ8WXR4 1341 aa21.64■■□□□ 1.05
MAP1LC3B-208ENST00000570189 IRS2Q9Y4H2 1338 aa21.64■■□□□ 1.05
MAP1LC3B-208ENST00000570189 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
MAP1LC3B-208ENST00000570189 CHRNDQ07001 517 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms