RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
CDH11-217ENST00000569624 EYA3Q99504 573 aa16.91■□□□□ 0.3
CDH11-217ENST00000569624 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
CDH11-217ENST00000569624 RBBP6Q7Z6E9 1792 aaKnown RBP16.9■□□□□ 0.3
CDH11-217ENST00000569624 C6orf229H3BNL8 230 aa16.9■□□□□ 0.3
CDH11-217ENST00000569624 ZNF280AP59817 542 aaPredicted RBP16.9■□□□□ 0.3
CDH11-217ENST00000569624 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
CDH11-217ENST00000569624 PITPNM2Q9BZ72 1349 aa16.9■□□□□ 0.3
CDH11-217ENST00000569624 TM4SF4P48230 202 aa16.89■□□□□ 0.29
CDH11-217ENST00000569624 GPSM2P81274 684 aa16.89■□□□□ 0.29
CDH11-217ENST00000569624 DOK7Q18PE1 504 aa16.89■□□□□ 0.29
CDH11-217ENST00000569624 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
CDH11-217ENST00000569624 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
CDH11-217ENST00000569624 CFHR5Q9BXR6 569 aa16.89■□□□□ 0.29
CDH11-217ENST00000569624 COL4A1P02462 1669 aa16.88■□□□□ 0.29
CDH11-217ENST00000569624 NEFMP07197 916 aa16.88■□□□□ 0.29
CDH11-217ENST00000569624 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
CDH11-217ENST00000569624 TCIRG1Q13488 830 aa16.88■□□□□ 0.29
CDH11-217ENST00000569624 SCARF1Q14162 830 aa16.88■□□□□ 0.29
CDH11-217ENST00000569624 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
CDH11-217ENST00000569624 ANXA1P04083 346 aa16.87■□□□□ 0.29
CDH11-217ENST00000569624 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
CDH11-217ENST00000569624 AGBL3Q8NEM8 1001 aa16.87■□□□□ 0.29
CDH11-217ENST00000569624 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
CDH11-217ENST00000569624 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
CDH11-217ENST00000569624 TRIOBPQ9H2D6 2365 aa16.86■□□□□ 0.29
CDH11-217ENST00000569624 FKTNO75072 461 aa16.86■□□□□ 0.29
CDH11-217ENST00000569624 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
CDH11-217ENST00000569624 FXR1P51114 621 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDH11-217ENST00000569624 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
CDH11-217ENST00000569624 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
CDH11-217ENST00000569624 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
CDH11-217ENST00000569624 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
CDH11-217ENST00000569624 RSBN1LQ6PCB5 846 aaPredicted RBP16.85■□□□□ 0.29
CDH11-217ENST00000569624 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
CDH11-217ENST00000569624 XAGE3Q8WTP9 111 aa16.85■□□□□ 0.29
CDH11-217ENST00000569624 ZC3H12CQ9C0D7 883 aaKnown RBP16.85■□□□□ 0.29
CDH11-217ENST00000569624 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
CDH11-217ENST00000569624 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
CDH11-217ENST00000569624 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
CDH11-217ENST00000569624 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
CDH11-217ENST00000569624 RANBP2P49792 3224 aaKnown RBP16.84■□□□□ 0.29
CDH11-217ENST00000569624 AIMP1Q12904 312 aaKnown RBP16.83■□□□□ 0.28
CDH11-217ENST00000569624 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.28
CDH11-217ENST00000569624 GMLQ99445 158 aa16.83■□□□□ 0.28
CDH11-217ENST00000569624 POTEFA5A3E0 1075 aa16.82■□□□□ 0.28
CDH11-217ENST00000569624 USP17L8P0C7I0 530 aa16.82■□□□□ 0.28
CDH11-217ENST00000569624 G3V3G9 751 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 UFL1O94874 794 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
CDH11-217ENST00000569624 DCAF8Q5TAQ9 597 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 R3HDMLQ9H3Y0 253 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 LAMB1P07942 1786 aa16.81■□□□□ 0.28
CDH11-217ENST00000569624 ALDH1A1P00352 501 aa16.8■□□□□ 0.28
CDH11-217ENST00000569624 TTLL12Q14166 644 aaPredicted RBP16.8■□□□□ 0.28
CDH11-217ENST00000569624 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
CDH11-217ENST00000569624 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
CDH11-217ENST00000569624 NF2P35240 595 aa16.79■□□□□ 0.28
CDH11-217ENST00000569624 MKRN3Q13064 507 aaKnown RBP16.79■□□□□ 0.28
CDH11-217ENST00000569624 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
CDH11-217ENST00000569624 OTOP1Q7RTM1 612 aa16.79■□□□□ 0.28
CDH11-217ENST00000569624 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
CDH11-217ENST00000569624 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
CDH11-217ENST00000569624 SCAF8Q9UPN6 1271 aaKnown RBP16.79■□□□□ 0.28
CDH11-217ENST00000569624 TRIM17Q9Y577 477 aa16.79■□□□□ 0.28
CDH11-217ENST00000569624 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
CDH11-217ENST00000569624 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
CDH11-217ENST00000569624 ZNF428Q96B54 188 aa16.78■□□□□ 0.28
CDH11-217ENST00000569624 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
CDH11-217ENST00000569624 USP17L3A6NCW0 530 aa16.77■□□□□ 0.28
CDH11-217ENST00000569624 USP17L4A6NCW7 530 aa16.77■□□□□ 0.28
CDH11-217ENST00000569624 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
CDH11-217ENST00000569624 NBPF9Q3BBW0 867 aa16.77■□□□□ 0.28
CDH11-217ENST00000569624 USP17L1Q7RTZ2 530 aa16.77■□□□□ 0.28
CDH11-217ENST00000569624 PODNQ7Z5L7 613 aa16.77■□□□□ 0.28
CDH11-217ENST00000569624 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
CDH11-217ENST00000569624 SPRYD7Q5W111 196 aa16.76■□□□□ 0.27
CDH11-217ENST00000569624 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
CDH11-217ENST00000569624 INHBEP58166 350 aa16.75■□□□□ 0.27
CDH11-217ENST00000569624 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
CDH11-217ENST00000569624 LDLRAD1Q5T700 205 aa16.75■□□□□ 0.27
CDH11-217ENST00000569624 ANKRD13DQ6ZTN6 518 aa16.75■□□□□ 0.27
CDH11-217ENST00000569624 ARMC5Q96C12 935 aa16.75■□□□□ 0.27
CDH11-217ENST00000569624 PNNQ9H307 717 aaKnown RBP16.75■□□□□ 0.27
CDH11-217ENST00000569624 PTPN22Q9Y2R2 807 aa16.75■□□□□ 0.27
CDH11-217ENST00000569624 XDHP47989 1333 aa16.74■□□□□ 0.27
CDH11-217ENST00000569624 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
CDH11-217ENST00000569624 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
CDH11-217ENST00000569624 WNT10BO00744 389 aa16.74■□□□□ 0.27
CDH11-217ENST00000569624 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
CDH11-217ENST00000569624 IFNL1Q8IU54 200 aa16.74■□□□□ 0.27
CDH11-217ENST00000569624 SEC31BQ9NQW1 1179 aa16.74■□□□□ 0.27
CDH11-217ENST00000569624 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
CDH11-217ENST00000569624 COLQQ9Y215 455 aaPredicted RBP16.74■□□□□ 0.27
CDH11-217ENST00000569624 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
CDH11-217ENST00000569624 EN2P19622 333 aaPredicted RBP16.73■□□□□ 0.27
CDH11-217ENST00000569624 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms