RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 PFKFB2O60825 505 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 HSP90B1P14625 803 aaKnown RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 ATF3P18847 181 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 IL15P40933 162 aaPredicted RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 ZC3H6P61129 1189 aaKnown RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 TYRO3Q06418 890 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 CHAF1AQ13111 956 aaPredicted RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 RESTQ13127 1097 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 Q6ZUG5 572 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 UBE3BQ7Z3V4 1068 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 ZNF589Q86UQ0 364 aaPredicted RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 ZNF396Q96N95 335 aaPredicted RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 ATG3Q9NT62 314 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 MEGF6O75095 1541 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 COL18A1P39060 1754 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 ARFGEF2Q9Y6D5 1785 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
SPG7-220ENST00000569363 SPEF2Q9C093 1822 aa9.45□□□□□ -0.9
SPG7-220ENST00000569363 CIAO1O76071 339 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
SPG7-220ENST00000569363 CASP7P55210 303 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 FGD1P98174 961 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 DHX32Q7L7V1 743 aaKnown RBP9.44□□□□□ -0.9
SPG7-220ENST00000569363 TDRD7Q8NHU6 1098 aaKnown RBP9.44□□□□□ -0.9
SPG7-220ENST00000569363 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 BICD2Q8TD16 824 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 DNAJC2Q99543 621 aaKnown RBP9.44□□□□□ -0.9
SPG7-220ENST00000569363 DBNDD2Q9BQY9 259 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 CWC25Q9NXE8 425 aaPredicted RBP9.44□□□□□ -0.9
SPG7-220ENST00000569363 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 MRVI1Q9Y6F6 885 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.44□□□□□ -0.9
SPG7-220ENST00000569363 CPDO75976 1380 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 ZNF609O15014 1411 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 RGPD5Q99666 1765 aa9.44□□□□□ -0.9
SPG7-220ENST00000569363 TNS3Q68CZ2 1445 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 LIG1P18858 919 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 CDC25BP30305 580 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 PLCB2Q00722 1185 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 RGS22Q8NE09 1264 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 CERKQ8TCT0 537 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 DDX54Q8TDD1 881 aaKnown RBP9.43□□□□□ -0.9
SPG7-220ENST00000569363 BRF1Q92994 677 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 PAG1Q9NWQ8 432 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 DACT1Q9NYF0 836 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 USP16Q9Y5T5 823 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 TCHHQ07283 1943 aa9.43□□□□□ -0.9
SPG7-220ENST00000569363 ABCC12Q96J65 1359 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 ERVV-2B6SEH9 535 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 CYP27B1O15528 508 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
SPG7-220ENST00000569363 CYP21A2P08686 494 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 FOXO4P98177 505 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 STK3Q13188 491 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 TPRNQ4KMQ1 711 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 ZMYM1Q5SVZ6 1142 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 LMBR1LQ6UX01 489 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 FBXL16Q8N461 479 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 CCDC191Q8NCU4 936 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 KIAA1524Q8TCG1 905 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 FBXO41Q8TF61 875 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 ZNF274Q96GC6 653 aaPredicted RBP9.42□□□□□ -0.9
SPG7-220ENST00000569363 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
SPG7-220ENST00000569363 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
SPG7-220ENST00000569363 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 ATP5J2-PTCD1G3V325 749 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 EYA2O00167 538 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 RNF113AO15541 343 aaKnown RBP9.41□□□□□ -0.9
SPG7-220ENST00000569363 NEMFO60524 1076 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
SPG7-220ENST00000569363 ZNF75DP51815 510 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 EXOSC10Q01780 885 aaKnown RBP9.41□□□□□ -0.9
SPG7-220ENST00000569363 DHX8Q14562 1220 aaKnown RBP9.41□□□□□ -0.9
SPG7-220ENST00000569363 ANO6Q4KMQ2 910 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 CCDC73Q6ZRK6 1079 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 EDC3Q96F86 508 aaKnown RBP9.41□□□□□ -0.9
SPG7-220ENST00000569363 TCEANC2Q96MN5 208 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 NEUROD6Q96NK8 337 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 FAM13BQ9NYF5 915 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
SPG7-220ENST00000569363 AKAP2Q9Y2D5 859 aa9.41□□□□□ -0.9
SPG7-220ENST00000569363 GOLGA6L19H0YKK7 550 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 GOLIM4O00461 696 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.9
SPG7-220ENST00000569363 JAK2O60674 1132 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
SPG7-220ENST00000569363 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
SPG7-220ENST00000569363 ZNF165P49910 485 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 RBM10P98175 930 aaKnown RBP9.4□□□□□ -0.9
SPG7-220ENST00000569363 SCRN1Q12765 414 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 CAMK4Q16566 473 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 STX1AQ16623 288 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 SARM1Q6SZW1 724 aa9.4□□□□□ -0.9
SPG7-220ENST00000569363 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms