RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SYKP43405 635 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 FAM160A1Q05DH4 1040 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 ERCC6LQ2NKX8 1250 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 VPS53Q5VIR6 699 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 LLPHQ9BRT6 129 aaKnown RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 DACT1Q9NYF0 836 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 DDX41Q9UJV9 622 aaKnown RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 CEBPZQ03701 1054 aaKnown RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 TMPOP42166 694 aaKnown RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 MICAL1Q8TDZ2 1067 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 SAAL1Q96ER3 474 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 RMDN2Q96LZ7 410 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 ZNF692Q9BU19 519 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 TUBB6Q9BUF5 446 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 SATB2Q9UPW6 733 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 AKR1B15C9JRZ8 316 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.06□□□□□ -1.121e-6■■■■■ 69.2
CNOT1-216ENST00000569240 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 BICDL2A1A5D9 508 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 ZNF131P52739 623 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
CNOT1-216ENST00000569240 VWA3BQ502W6 1294 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 LMBRD1Q9NUN5 540 aa8.06□□□□□ -1.12
CNOT1-216ENST00000569240 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 GKAP1Q5VSY0 366 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 STXBP4Q6ZWJ1 553 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 ARMC2Q8NEN0 867 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 RNF41Q9H4P4 317 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 RUSC2Q8N2Y8 1516 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 PRKAR2BP31323 418 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 LARP1Q6PKG0 1096 aaKnown RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 PARP2Q9UGN5 583 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 VGLL3A8MV65 326 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 CREB3O43889 395 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 MUM1L1Q5H9M0 696 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 CNPY4Q8N129 248 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 FERP16591 822 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 STMN1P16949 149 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 STK26Q9P289 416 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 IKBKGQ9Y6K9 419 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 CAPN7Q9Y6W3 813 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 MORC2Q9Y6X9 1032 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC152Q4G0S7 254 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC184Q52MB2 194 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 SSH1Q8WYL5 1049 aa8.05□□□□□ -1.12
CNOT1-216ENST00000569240 MOV10L1Q9BXT6 1211 aaKnown RBP8.05□□□□□ -1.12
CNOT1-216ENST00000569240 CYP26C1Q6V0L0 522 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 OSBPL9Q96SU4 736 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 ESYT1Q9BSJ8 1104 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 GNL3LQ9NVN8 582 aaKnown RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 A0A1W2PRG0 241 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 MYO1CO00159 1063 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 PSMA7O14818 248 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 MXRA7P84157 204 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 TADA2BQ86TJ2 420 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 MLKLQ8NB16 471 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 NGDNQ8NEJ9 315 aaKnown RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 GDAP1L1Q96MZ0 367 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 RNF40O75150 1001 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC92Q53HC0 331 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 TMTC2Q8N394 836 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 RUBCNQ92622 972 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 ECHDC1Q9NTX5 307 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 RNF14Q9UBS8 474 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 RTL1A6NKG5 1358 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 MTIF2P46199 727 aaKnown RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 AOPEPQ8N6M6 819 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 CAPS2Q9BXY5 557 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 PSD3Q9NYI0 1048 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 POLR3AO14802 1390 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 A0A087WZG4 1122 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 MIER3Q7Z3K6 550 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 FERMT1Q9BQL6 677 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 ZNF287Q9HBT7 754 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 CETN3O15182 167 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 LMNAP02545 664 aaKnown RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 SLC4A2P04920 1241 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 RIC3Q7Z5B4 369 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 ANKRD44Q8N8A2 993 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 IQCGQ9H095 443 aaKnown RBP8.04□□□□□ -1.12
CNOT1-216ENST00000569240 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
CNOT1-216ENST00000569240 ZEB2O60315 1214 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TRIM27P14373 513 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 FERMT3Q86UX7 667 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 HOMER3Q9NSC5 361 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 DAAM1Q9Y4D1 1078 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 ATP2A2P16615 1042 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 ZBTB16Q05516 673 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TMEM266Q2M3C6 531 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TDRD12Q587J7 1177 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms