RNA–Protein interactions for RNA: ENST00000569042.5

PDPR-211, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 4

Gene PDPR, Length 598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-211	ENST00000569042	PDE8B	O95263	885 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	HCLS1	P14317	486 aa	Predicted RBP	13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	SLC10A5	Q5PT55	438 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	USPL1	Q5W0Q7	1092 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	ANKRD18A	Q8IVF6	992 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	KBTBD3	Q8NAB2	608 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	FLAD1	Q8NFF5	587 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	LPIN2	Q92539	896 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	NLRP3	Q96P20	1036 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	DNAJC2	Q99543	621 aa	Known RBP	13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.07	□□□□□ -0.32	6e-6	■■■□□ 19.2
PDPR-211	ENST00000569042	RIPOR2	Q9Y4F9	1068 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	C4A	P0C0L4	1744 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	ARAP2	Q8WZ64	1704 aa		13.07	□□□□□ -0.32
PDPR-211	ENST00000569042	RIC1	Q4ADV7	1423 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	HSPA4	P34932	840 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	SF3B3	Q15393	1217 aa	Known RBP	13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	FAM182B	Q5T319	152 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	IL17RA	Q96F46	866 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	ANP32E	Q9BTT0	268 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	SNRK	Q9NRH2	765 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	HMG20B	Q9P0W2	317 aa		13.06	□□□□□ -0.32
PDPR-211	ENST00000569042	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	RGPD4	Q7Z3J3	1758 aa		13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	TIMM10	P62072	90 aa		13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	ARHGEF1	Q92888	912 aa	Known RBP	13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	XAGE2	Q96GT9	111 aa		13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	PUS3	Q9BZE2	481 aa	Known RBP	13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	HELLS	Q9NRZ9	838 aa		13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	CCDC171	Q6TFL3	1326 aa		13.05	□□□□□ -0.32
PDPR-211	ENST00000569042	PLSCR1	O15162	318 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	TRIM37	O94972	964 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	PSMA5	P28066	241 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	NMI	Q13287	307 aa	Predicted RBP	13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	KRT32	Q14532	448 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	TBC1D9B	Q66K14	1250 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	KIF2C	Q99661	725 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	GNL3L	Q9NVN8	582 aa	Known RBP	13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	CHMP5	Q9NZZ3	219 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	UBR3	Q6ZT12	1888 aa		13.04	□□□□□ -0.32
PDPR-211	ENST00000569042	GOLIM4	O00461	696 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	SLC4A3	P48751	1232 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	ST5	P78524	1137 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	ERFE	Q4G0M1	354 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	MCMDC2	Q4G0Z9	681 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	BICDL1	Q6ZP65	573 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	SYNE4	Q8N205	404 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	ANKRD2	Q9GZV1	360 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	LSG1	Q9H089	658 aa	Known RBP	13.03	□□□□□ -0.32
PDPR-211	ENST00000569042		U3KPZ7	1027 aa	Predicted RBP	13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	MED23	Q9ULK4	1368 aa		13.03	□□□□□ -0.32
PDPR-211	ENST00000569042	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	PHF14	O94880	888 aa		13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	DDX46	Q7L014	1031 aa	Known RBP	13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	PTF1A	Q7RTS3	328 aa		13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	VGLL2	Q8N8G2	317 aa		13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	CNBD1	Q8NA66	436 aa		13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	TM6SF1	Q9BZW5	370 aa		13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	CWC22	Q9HCG8	908 aa	Known RBP	13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	BSDC1	Q9NW68	430 aa	Predicted RBP	13.02	□□□□□ -0.33
PDPR-211	ENST00000569042	RNF113A	O15541	343 aa	Known RBP	13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	ARID4A	P29374	1257 aa	Predicted RBP	13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	NEK4	P51957	841 aa		13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	KCNQ4	P56696	695 aa		13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	TXNRD1	Q16881	649 aa		13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	BCL2L12	Q9HB09	334 aa		13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	SRP68	Q9UHB9	627 aa	Known RBP	13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.01	□□□□□ -0.33
PDPR-211	ENST00000569042	MYH7	P12883	1935 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	IGSF3	O75054	1194 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	UBE4A	Q14139	1066 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	ANKRD1	Q15327	319 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	CAVIN4	Q5BKX8	364 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	TMED8	Q6PL24	325 aa	Predicted RBP	13	□□□□□ -0.33
PDPR-211	ENST00000569042	MAP4K1	Q92918	833 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	SLK	Q9H2G2	1235 aa	Predicted RBP	13	□□□□□ -0.33
PDPR-211	ENST00000569042	CTNNA3	Q9UI47	895 aa		13	□□□□□ -0.33
PDPR-211	ENST00000569042	CASZ1	Q86V15	1759 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042		A0A0D9SFI3	127 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	APBA3	O96018	575 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	PTMS	P20962	102 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	FGFR2	P21802	821 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	ZMYM1	Q5SVZ6	1142 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	FBXO41	Q8TF61	875 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	FAM227B	Q96M60	508 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	DSCC1	Q9BVC3	393 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	RBM8A	Q9Y5S9	174 aa	Known RBP	12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	CYP46A1	Q9Y6A2	500 aa		12.99	□□□□□ -0.33
PDPR-211	ENST00000569042	SEMA3E	O15041	775 aa		12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	HMGB1	P09429	215 aa	Known RBP	12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	ADORA1	P30542	326 aa		12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	RPS8	P62241	208 aa	Known RBP	12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	CHRND	Q07001	517 aa		12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	MAP3K12	Q12852	859 aa		12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	CCDC102B	Q68D86	513 aa		12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	TMC4	Q7Z404	712 aa		12.98	□□□□□ -0.33
PDPR-211	ENST00000569042	VPS37D	Q86XT2	251 aa		12.98	□□□□□ -0.33

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