RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
EDC3-215ENST00000569007 GRM8O00222 908 aa22.23■■□□□ 1.15
EDC3-215ENST00000569007 ALDH1L1O75891 902 aa22.23■■□□□ 1.15
EDC3-215ENST00000569007 HTRA3P83110 453 aa22.23■■□□□ 1.15
EDC3-215ENST00000569007 CIAPIN1Q6FI81 312 aa22.23■■□□□ 1.15
EDC3-215ENST00000569007 DBNDD1Q9H9R9 158 aa22.23■■□□□ 1.15
EDC3-215ENST00000569007 BSDC1Q9NW68 430 aaPredicted RBP22.23■■□□□ 1.15
EDC3-215ENST00000569007 ITGA6P23229 1130 aa22.22■■□□□ 1.15
EDC3-215ENST00000569007 EPS15P42566 896 aa22.22■■□□□ 1.15
EDC3-215ENST00000569007 FOXO4P98177 505 aa22.22■■□□□ 1.15
EDC3-215ENST00000569007 DOK7Q18PE1 504 aa22.22■■□□□ 1.15
EDC3-215ENST00000569007 PNMA8AQ86V59 439 aaPredicted RBP22.22■■□□□ 1.15
EDC3-215ENST00000569007 ZC3H12CQ9C0D7 883 aaKnown RBP22.22■■□□□ 1.15
EDC3-215ENST00000569007 C9orf78Q9NZ63 289 aaPredicted RBP22.22■■□□□ 1.15
EDC3-215ENST00000569007 PTPRCP08575 1304 aa22.22■■□□□ 1.15
EDC3-215ENST00000569007 XDHP47989 1333 aa22.22■■□□□ 1.15
EDC3-215ENST00000569007 GMPSP49915 693 aaPredicted RBP22.21■■□□□ 1.15
EDC3-215ENST00000569007 TNIP1Q15025 636 aa22.21■■□□□ 1.15
EDC3-215ENST00000569007 ALDH1L2Q3SY69 923 aa22.21■■□□□ 1.15
EDC3-215ENST00000569007 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
EDC3-215ENST00000569007 MINPP1Q9UNW1 487 aa22.21■■□□□ 1.15
EDC3-215ENST00000569007 CLEC11AQ9Y240 323 aa22.21■■□□□ 1.15
EDC3-215ENST00000569007 IGHMBP2P38935 993 aaKnown RBP22.2■■□□□ 1.14
EDC3-215ENST00000569007 GPRC5DQ9NZD1 345 aa22.2■■□□□ 1.14
EDC3-215ENST00000569007 SPEF2Q9C093 1822 aa22.2■■□□□ 1.14
EDC3-215ENST00000569007 ECE2O60344 883 aa22.19■■□□□ 1.14
EDC3-215ENST00000569007 CT47B1P0C2W7 299 aaPredicted RBP22.19■■□□□ 1.14
EDC3-215ENST00000569007 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
EDC3-215ENST00000569007 WTIPA6NIX2 430 aaPredicted RBP22.18■■□□□ 1.14
EDC3-215ENST00000569007 ATP2B4P23634 1241 aa22.18■■□□□ 1.14
EDC3-215ENST00000569007 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
EDC3-215ENST00000569007 DNAJC5GQ8N7S2 189 aa22.18■■□□□ 1.14
EDC3-215ENST00000569007 KCNQ5Q9NR82 932 aa22.18■■□□□ 1.14
EDC3-215ENST00000569007 CHMP3Q9Y3E7 222 aa22.18■■□□□ 1.14
EDC3-215ENST00000569007 ADAMTSL1Q8N6G6 1762 aa22.17■■□□□ 1.14
EDC3-215ENST00000569007 ANKRD18BA2A2Z9 1011 aa22.17■■□□□ 1.14
EDC3-215ENST00000569007 MPHOSPH8Q99549 860 aa22.17■■□□□ 1.14
EDC3-215ENST00000569007 G3V3G9 751 aa22.16■■□□□ 1.14
EDC3-215ENST00000569007 PSMD14O00487 310 aa22.16■■□□□ 1.14
EDC3-215ENST00000569007 IFIT5Q13325 482 aaKnown RBP22.16■■□□□ 1.14
EDC3-215ENST00000569007 DCAF8Q5TAQ9 597 aa22.16■■□□□ 1.14
EDC3-215ENST00000569007 ADARB2Q9NS39 739 aaKnown RBP22.16■■□□□ 1.14
EDC3-215ENST00000569007 NBPF7P0C2Y1 421 aaPredicted RBP22.15■■□□□ 1.14
EDC3-215ENST00000569007 CCT4P50991 539 aaKnown RBP22.15■■□□□ 1.14
EDC3-215ENST00000569007 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
EDC3-215ENST00000569007 MAP1SQ66K74 1059 aaPredicted RBP22.15■■□□□ 1.14
EDC3-215ENST00000569007 USP50Q70EL3 339 aaPredicted RBP22.15■■□□□ 1.14
EDC3-215ENST00000569007 ZBTB12Q9Y330 459 aaPredicted RBP22.15■■□□□ 1.14
EDC3-215ENST00000569007 UTYO14607 1347 aa22.14■■□□□ 1.14
EDC3-215ENST00000569007 PASKQ96RG2 1323 aa22.14■■□□□ 1.14
EDC3-215ENST00000569007 ITGBL1O95965 494 aaPredicted RBP22.14■■□□□ 1.13
EDC3-215ENST00000569007 CNTROBQ8N137 903 aa22.14■■□□□ 1.13
EDC3-215ENST00000569007 KAZALD1Q96I82 304 aa22.14■■□□□ 1.13
EDC3-215ENST00000569007 SUCLG2Q96I99 432 aa22.14■■□□□ 1.13
EDC3-215ENST00000569007 ANKRD2Q9GZV1 360 aa22.14■■□□□ 1.13
EDC3-215ENST00000569007 SHTN1A0MZ66 631 aa22.13■■□□□ 1.13
EDC3-215ENST00000569007 CCDC57Q2TAC2 916 aa22.13■■□□□ 1.13
EDC3-215ENST00000569007 CNOT7Q9UIV1 285 aaKnown RBP22.13■■□□□ 1.13
EDC3-215ENST00000569007 MED23Q9ULK4 1368 aa22.12■■□□□ 1.13
EDC3-215ENST00000569007 RARSP54136 660 aaKnown RBP22.12■■□□□ 1.13
EDC3-215ENST00000569007 NOB1Q9ULX3 412 aaKnown RBP22.12■■□□□ 1.13
EDC3-215ENST00000569007 LEMD3Q9Y2U8 911 aa22.12■■□□□ 1.13
EDC3-215ENST00000569007 SCN9AQ15858 1988 aa22.12■■□□□ 1.13
EDC3-215ENST00000569007 CHRNDQ07001 517 aa22.11■■□□□ 1.13
EDC3-215ENST00000569007 MICALL2Q8IY33 904 aa22.11■■□□□ 1.13
EDC3-215ENST00000569007 DPF2Q92785 391 aa22.11■■□□□ 1.13
EDC3-215ENST00000569007 KLRG1Q96E93 195 aa22.11■■□□□ 1.13
EDC3-215ENST00000569007 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
EDC3-215ENST00000569007 ZNF804BA4D1E1 1349 aa22.1■■□□□ 1.13
EDC3-215ENST00000569007 H7C1D1 291 aa22.1■■□□□ 1.13
EDC3-215ENST00000569007 VIL1P09327 827 aaKnown RBP22.1■■□□□ 1.13
EDC3-215ENST00000569007 BRPF1P55201 1214 aaPredicted RBP22.1■■□□□ 1.13
EDC3-215ENST00000569007 TAF7LQ5H9L4 462 aa22.1■■□□□ 1.13
EDC3-215ENST00000569007 TRPM4Q8TD43 1214 aa22.1■■□□□ 1.13
EDC3-215ENST00000569007 RPS12P25398 132 aaKnown RBP22.09■■□□□ 1.13
EDC3-215ENST00000569007 TXNRD3Q86VQ6 643 aa22.09■■□□□ 1.13
EDC3-215ENST00000569007 HELBQ8NG08 1087 aaPredicted RBP22.09■■□□□ 1.13
EDC3-215ENST00000569007 USP44Q9H0E7 712 aa22.09■■□□□ 1.13
EDC3-215ENST00000569007 BICC1Q9H694 974 aaKnown RBP22.09■■□□□ 1.13
EDC3-215ENST00000569007 CREBZFQ9NS37 354 aa22.09■■□□□ 1.13
EDC3-215ENST00000569007 KLRK1P26718 216 aa22.08■■□□□ 1.13
EDC3-215ENST00000569007 KCNJ4P48050 445 aa22.08■■□□□ 1.13
EDC3-215ENST00000569007 HIRAP54198 1017 aaPredicted RBP22.08■■□□□ 1.13
EDC3-215ENST00000569007 LDHAL6AQ6ZMR3 332 aa22.08■■□□□ 1.13
EDC3-215ENST00000569007 PODNQ7Z5L7 613 aa22.08■■□□□ 1.13
EDC3-215ENST00000569007 API5Q9BZZ5 524 aaKnown RBP22.08■■□□□ 1.13
EDC3-215ENST00000569007 SNAP23O00161 211 aa22.07■■□□□ 1.12
EDC3-215ENST00000569007 TAF5LO75529 589 aa22.07■■□□□ 1.12
EDC3-215ENST00000569007 RABL6Q3YEC7 729 aaPredicted RBP22.07■■□□□ 1.12
EDC3-215ENST00000569007 ANKRD44Q8N8A2 993 aa22.07■■□□□ 1.12
EDC3-215ENST00000569007 CNNM1Q9NRU3 951 aa22.07■■□□□ 1.12
EDC3-215ENST00000569007 USP17L3A6NCW0 530 aa22.06■■□□□ 1.12
EDC3-215ENST00000569007 USP17L4A6NCW7 530 aa22.06■■□□□ 1.12
EDC3-215ENST00000569007 TBC1D10BQ4KMP7 808 aaPredicted RBP22.06■■□□□ 1.12
EDC3-215ENST00000569007 RSBN1LQ6PCB5 846 aaPredicted RBP22.06■■□□□ 1.12
EDC3-215ENST00000569007 USP17L1Q7RTZ2 530 aa22.06■■□□□ 1.12
EDC3-215ENST00000569007 SAMD7Q7Z3H4 446 aa22.06■■□□□ 1.12
EDC3-215ENST00000569007 COA1Q9GZY4 146 aa22.06■■□□□ 1.12
EDC3-215ENST00000569007 TMEM88BA6NKF7 163 aa22.05■■□□□ 1.12
EDC3-215ENST00000569007 FMR1Q06787 632 aaKnown RBP eCLIP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms