RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
CYLD-213ENST00000568744 COL13A1Q5TAT6 717 aaPredicted RBP9.75□□□□□ -0.85
CYLD-213ENST00000568744 DUSP9Q99956 384 aaKnown RBP9.75□□□□□ -0.85
CYLD-213ENST00000568744 BCL11AQ9H165 835 aa9.75□□□□□ -0.85
CYLD-213ENST00000568744 NPHS2Q9NP85 383 aa9.75□□□□□ -0.85
CYLD-213ENST00000568744 NLRP2Q9NX02 1062 aa9.75□□□□□ -0.85
CYLD-213ENST00000568744 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
CYLD-213ENST00000568744 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
CYLD-213ENST00000568744 PRPF40AO75400 957 aaKnown RBP9.74□□□□□ -0.85
CYLD-213ENST00000568744 GHRHP01286 108 aa9.74□□□□□ -0.85
CYLD-213ENST00000568744 EIF2AK2P19525 551 aaKnown RBP9.74□□□□□ -0.85
CYLD-213ENST00000568744 SOX18P35713 384 aa9.74□□□□□ -0.85
CYLD-213ENST00000568744 EPS8L3Q8TE67 593 aaKnown RBP9.74□□□□□ -0.85
CYLD-213ENST00000568744 LOC102724428A0A0B4J2F2 783 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 EDN3P14138 238 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 CPB1P15086 417 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 ADH7P40394 386 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 SIK1P57059 783 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 GPLD1P80108 840 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 PCSK7Q16549 785 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
CYLD-213ENST00000568744 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 FAM35AQ86V20 835 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 FCHSD1Q86WN1 690 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 GALNT12Q8IXK2 581 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 GOLGA6L1Q8N7Z2 621 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 LATS2Q9NRM7 1088 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 GDF2Q9UK05 429 aaPredicted RBP9.73□□□□□ -0.85
CYLD-213ENST00000568744 SLC6A14Q9UN76 642 aa9.73□□□□□ -0.85
CYLD-213ENST00000568744 ALAS2P22557 587 aa9.72□□□□□ -0.85
CYLD-213ENST00000568744 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
CYLD-213ENST00000568744 TNFRSF25Q93038 417 aa9.72□□□□□ -0.85
CYLD-213ENST00000568744 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
CYLD-213ENST00000568744 PARP2Q9UGN5 583 aa9.72□□□□□ -0.85
CYLD-213ENST00000568744 SALL4Q9UJQ4 1053 aa9.72□□□□□ -0.85
CYLD-213ENST00000568744 ACPPP15309 386 aa9.71□□□□□ -0.86
CYLD-213ENST00000568744 PSMD2Q13200 908 aa9.71□□□□□ -0.86
CYLD-213ENST00000568744 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
CYLD-213ENST00000568744 ACDQ96AP0 544 aa9.71□□□□□ -0.86
CYLD-213ENST00000568744 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
CYLD-213ENST00000568744 MRS2Q9HD23 443 aa9.71□□□□□ -0.86
CYLD-213ENST00000568744 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
CYLD-213ENST00000568744 ELOA3DA6NLF2 546 aaPredicted RBP9.7□□□□□ -0.86
CYLD-213ENST00000568744 TRPA1O75762 1119 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 ELOA3BQ3SY89 546 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 SLCO4C1Q6ZQN7 724 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 NPM2Q86SE8 214 aaKnown RBP9.7□□□□□ -0.86
CYLD-213ENST00000568744 ELOA3Q8NG57 546 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 SPG7Q9UQ90 795 aa9.7□□□□□ -0.86
CYLD-213ENST00000568744 KIF4AO95239 1232 aa9.69□□□□□ -0.86
CYLD-213ENST00000568744 HOXD8P13378 290 aaPredicted RBP9.69□□□□□ -0.86
CYLD-213ENST00000568744 ELMSAN1Q6PJG2 1045 aa9.69□□□□□ -0.86
CYLD-213ENST00000568744 GALNT6Q8NCL4 622 aa9.69□□□□□ -0.86
CYLD-213ENST00000568744 OSMRQ99650 979 aa9.69□□□□□ -0.86
CYLD-213ENST00000568744 EHD4Q9H223 541 aa9.69□□□□□ -0.86
CYLD-213ENST00000568744 A0A1W2PP55 124 aa9.68□□□□□ -0.86
CYLD-213ENST00000568744 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
CYLD-213ENST00000568744 AMPD1P23109 780 aa9.68□□□□□ -0.86
CYLD-213ENST00000568744 ATP11AP98196 1134 aa9.68□□□□□ -0.86
CYLD-213ENST00000568744 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
CYLD-213ENST00000568744 ZKSCAN3Q9BRR0 538 aa9.68□□□□□ -0.86
CYLD-213ENST00000568744 EPXP11678 715 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 PSAPL1Q6NUJ1 521 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 CEP120Q8N960 986 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 NUDT8Q8WV74 236 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 PLD4Q96BZ4 506 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 MRRFQ96E11 262 aaKnown RBP9.67□□□□□ -0.86
CYLD-213ENST00000568744 SMG9Q9H0W8 520 aaKnown RBP9.67□□□□□ -0.86
CYLD-213ENST00000568744 RASSF4Q9H2L5 321 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 VTI1BQ9UEU0 232 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 NAGPAQ9UK23 515 aa9.67□□□□□ -0.86
CYLD-213ENST00000568744 UNCXA6NJT0 531 aa9.66□□□□□ -0.86
CYLD-213ENST00000568744 GNA15P30679 374 aa9.66□□□□□ -0.86
CYLD-213ENST00000568744 PEAR1Q5VY43 1037 aaPredicted RBP9.66□□□□□ -0.86
CYLD-213ENST00000568744 CEP135Q66GS9 1140 aa9.66□□□□□ -0.86
CYLD-213ENST00000568744 C1orf229Q6ZS94 237 aaPredicted RBP9.66□□□□□ -0.86
CYLD-213ENST00000568744 BCO2Q9BYV7 579 aa9.66□□□□□ -0.86
CYLD-213ENST00000568744 RGS9O75916 674 aaPredicted RBP9.65□□□□□ -0.86
CYLD-213ENST00000568744 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.86
CYLD-213ENST00000568744 SLURP2P0DP57 97 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 BCRP11274 1271 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 MAP3K10Q02779 954 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 NXPE4Q6UWF7 544 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 ASAP3Q8TDY4 903 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 HHIPQ96QV1 700 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 PBX4Q9BYU1 374 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 SUV39H2Q9H5I1 410 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 DZANK1Q9NVP4 752 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 PPP4R2Q9NY27 417 aa9.65□□□□□ -0.86
CYLD-213ENST00000568744 SORBS3O60504 671 aa9.64□□□□□ -0.87
CYLD-213ENST00000568744 CELA2BP08218 269 aaPredicted RBP9.64□□□□□ -0.87
CYLD-213ENST00000568744 EIF4BP23588 611 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms