RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 INTS5Q6P9B9 1019 aaKnown RBP10.39□□□□□ -0.75
TCF4-241ENST00000568740 LRP6O75581 1613 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 TNS2Q63HR2 1409 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 AFF2P51816 1311 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 SNAP23O00161 211 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 CHMLP26374 656 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
TCF4-241ENST00000568740 UBXN4Q92575 508 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 USP26Q9BXU7 913 aa10.39□□□□□ -0.75
TCF4-241ENST00000568740 TRMT112Q9UI30 125 aaKnown RBP10.39□□□□□ -0.75
TCF4-241ENST00000568740 AMIGO3Q86WK7 504 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 DBNDD2Q9BQY9 259 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 LARP6Q9BRS8 491 aaKnown RBP10.38□□□□□ -0.75
TCF4-241ENST00000568740 OSBPL3Q9H4L5 887 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 THRAP3Q9Y2W1 955 aaKnown RBP10.38□□□□□ -0.75
TCF4-241ENST00000568740 SLIT2O94813 1529 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 VPS72Q15906 364 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
TCF4-241ENST00000568740 KLHL42Q9P2K6 505 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 PALD1Q9ULE6 856 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 MAP3K15Q6ZN16 1313 aa10.38□□□□□ -0.75
TCF4-241ENST00000568740 ZNF16P17020 682 aaPredicted RBP10.37□□□□□ -0.75
TCF4-241ENST00000568740 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
TCF4-241ENST00000568740 CCDC191Q8NCU4 936 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
TCF4-241ENST00000568740 EVI5LQ96CN4 794 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 DBNLQ9UJU6 430 aaKnown RBP10.37□□□□□ -0.75
TCF4-241ENST00000568740 PLCH1Q4KWH8 1693 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 UBN2Q6ZU65 1347 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 PHF14O94880 888 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 NLRP10Q86W26 655 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 ISCA1Q9BUE6 129 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 TEX13AQ9BXU3 409 aaPredicted RBP10.37□□□□□ -0.75
TCF4-241ENST00000568740 STAP2Q9UGK3 403 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 ERC2O15083 957 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 CASC1Q6TDU7 716 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 ESYT1Q9BSJ8 1104 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 GREM2Q9H772 168 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 ECHDC1Q9NTX5 307 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
TCF4-241ENST00000568740 RFX1P22670 979 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 BECN1Q14457 450 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 VTI1AQ96AJ9 217 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 GJD4Q96KN9 370 aaPredicted RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 CALR3Q96L12 384 aaKnown RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 CDCA7Q9BWT1 371 aaPredicted RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 UPF3BQ9BZI7 483 aaKnown RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 QTRT2Q9H974 415 aaKnown RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 ITGB4P16144 1822 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 RABL6Q3YEC7 729 aaPredicted RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 SUSD4Q5VX71 490 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 ATG9AQ7Z3C6 839 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 SEPT12Q8IYM1 358 aa10.36□□□□□ -0.75
TCF4-241ENST00000568740 SRP68Q9UHB9 627 aaKnown RBP10.36□□□□□ -0.75
TCF4-241ENST00000568740 ERBB4Q15303 1308 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 COL22A1Q8NFW1 1626 aaPredicted RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 IRS4O14654 1257 aaPredicted RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 CPA1P15085 419 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 CCDC57Q2TAC2 916 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 TNNI3KQ59H18 835 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 FPGT-TNNI3KV9GXZ4 949 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 WTIPA6NIX2 430 aaPredicted RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 EIF5P55010 431 aaKnown RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
TCF4-241ENST00000568740 PI16Q6UXB8 463 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
TCF4-241ENST00000568740 NIP7Q9Y221 180 aaKnown RBP eCLIP10.35□□□□□ -0.75
TCF4-241ENST00000568740 ITGA6P23229 1130 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 ADORA1P30542 326 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 HSCBQ8IWL3 235 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 ZBTB38Q8NAP3 1195 aaPredicted RBP10.34□□□□□ -0.75
TCF4-241ENST00000568740 SEC62Q99442 399 aaKnown RBP10.34□□□□□ -0.75
TCF4-241ENST00000568740 SEC31BQ9NQW1 1179 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 USTQ9Y2C2 406 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 GLRX3O76003 335 aaKnown RBP10.34□□□□□ -0.75
TCF4-241ENST00000568740 HSP90AA1P07900 732 aaKnown RBP10.34□□□□□ -0.75
TCF4-241ENST00000568740 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
TCF4-241ENST00000568740 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 IL6STP40189 918 aaPredicted RBP10.33□□□□□ -0.76
TCF4-241ENST00000568740 PTH1RQ03431 593 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 TTLL11Q8NHH1 800 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 FSD1Q9BTV5 496 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 ARFGEF2Q9Y6D5 1785 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 GNPATO15228 680 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 TAF5LO75529 589 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 GSE1Q14687 1217 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 NFKBIBQ15653 356 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
TCF4-241ENST00000568740 LDHAL6AQ6ZMR3 332 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms