RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TBC1D16Q8TBP0 767 aa20.44■□□□□ 0.86
HERPUD1-215ENST00000568676 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
HERPUD1-215ENST00000568676 ZNF609O15014 1411 aa20.44■□□□□ 0.86
HERPUD1-215ENST00000568676 VIL1P09327 827 aaKnown RBP20.43■□□□□ 0.86
HERPUD1-215ENST00000568676 GOLGA2Q08379 1002 aa20.43■□□□□ 0.86
HERPUD1-215ENST00000568676 DUSP27Q5VZP5 1158 aa20.43■□□□□ 0.86
HERPUD1-215ENST00000568676 RTL9Q8NET4 1388 aa20.43■□□□□ 0.86
HERPUD1-215ENST00000568676 G3V3G9 751 aa20.42■□□□□ 0.86
HERPUD1-215ENST00000568676 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
HERPUD1-215ENST00000568676 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
HERPUD1-215ENST00000568676 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
HERPUD1-215ENST00000568676 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
HERPUD1-215ENST00000568676 REM2Q8IYK8 340 aaPredicted RBP20.42■□□□□ 0.86
HERPUD1-215ENST00000568676 FAM155AB1AL88 458 aaPredicted RBP20.41■□□□□ 0.86
HERPUD1-215ENST00000568676 SLC34A2O95436 690 aa20.41■□□□□ 0.86
HERPUD1-215ENST00000568676 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
HERPUD1-215ENST00000568676 DGKZQ13574 1117 aa20.41■□□□□ 0.86
HERPUD1-215ENST00000568676 DOK7Q18PE1 504 aa20.41■□□□□ 0.86
HERPUD1-215ENST00000568676 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
HERPUD1-215ENST00000568676 CCDC191Q8NCU4 936 aa20.4■□□□□ 0.86
HERPUD1-215ENST00000568676 AGBL3Q8NEM8 1001 aa20.4■□□□□ 0.86
HERPUD1-215ENST00000568676 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
HERPUD1-215ENST00000568676 GGA1Q9UJY5 639 aa20.4■□□□□ 0.86
HERPUD1-215ENST00000568676 EGFRP00533 1210 aa20.39■□□□□ 0.85
HERPUD1-215ENST00000568676 ZNF157P51786 506 aaPredicted RBP20.39■□□□□ 0.85
HERPUD1-215ENST00000568676 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
HERPUD1-215ENST00000568676 RBM26Q5T8P6 1007 aaKnown RBP20.39■□□□□ 0.85
HERPUD1-215ENST00000568676 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
HERPUD1-215ENST00000568676 ADM5C9JUS6 153 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 PDE8AO60658 829 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 UFL1O94874 794 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 FKBP1BP68106 108 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 KCNQ5Q9NR82 932 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 GGA3Q9NZ52 723 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
HERPUD1-215ENST00000568676 CASP8AP2Q9UKL3 1982 aa20.37■□□□□ 0.85
HERPUD1-215ENST00000568676 ZNF853P0CG23 659 aa20.37■□□□□ 0.85
HERPUD1-215ENST00000568676 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-215ENST00000568676 GNAI1P63096 354 aa20.37■□□□□ 0.85
HERPUD1-215ENST00000568676 KIF23Q02241 960 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-215ENST00000568676 RSBN1LQ6PCB5 846 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-215ENST00000568676 XDHP47989 1333 aa20.36■□□□□ 0.85
HERPUD1-215ENST00000568676 PITPNM2Q9BZ72 1349 aa20.36■□□□□ 0.85
HERPUD1-215ENST00000568676 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
HERPUD1-215ENST00000568676 SLC10A3P09131 477 aa20.36■□□□□ 0.85
HERPUD1-215ENST00000568676 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
HERPUD1-215ENST00000568676 COL4A1P02462 1669 aa20.35■□□□□ 0.85
HERPUD1-215ENST00000568676 DLK2Q6UY11 383 aa20.35■□□□□ 0.85
HERPUD1-215ENST00000568676 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
HERPUD1-215ENST00000568676 MYD88Q99836 296 aa20.35■□□□□ 0.85
HERPUD1-215ENST00000568676 SEC31BQ9NQW1 1179 aa20.35■□□□□ 0.85
HERPUD1-215ENST00000568676 CWC25Q9NXE8 425 aaPredicted RBP20.35■□□□□ 0.85
HERPUD1-215ENST00000568676 ATP2B4P23634 1241 aa20.34■□□□□ 0.85
HERPUD1-215ENST00000568676 CDCA5Q96FF9 252 aa20.34■□□□□ 0.85
HERPUD1-215ENST00000568676 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
HERPUD1-215ENST00000568676 RNF186Q9NXI6 227 aa20.34■□□□□ 0.85
HERPUD1-215ENST00000568676 USP17L8P0C7I0 530 aa20.33■□□□□ 0.85
HERPUD1-215ENST00000568676 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.85
HERPUD1-215ENST00000568676 SCARF1Q14162 830 aa20.33■□□□□ 0.85
HERPUD1-215ENST00000568676 CDC5LQ99459 802 aaKnown RBP20.33■□□□□ 0.85
HERPUD1-215ENST00000568676 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
HERPUD1-215ENST00000568676 POLR2AP24928 1970 aaKnown RBP20.33■□□□□ 0.84
HERPUD1-215ENST00000568676 SCN9AQ15858 1988 aa20.33■□□□□ 0.84
HERPUD1-215ENST00000568676 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 TRPA1O75762 1119 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 MMP14P50281 582 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 ANGEL2Q5VTE6 544 aaKnown RBP20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 CSRNP1Q96S65 589 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 GMLQ99445 158 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 PSME4Q14997 1843 aa20.32■□□□□ 0.84
HERPUD1-215ENST00000568676 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
HERPUD1-215ENST00000568676 AKAP11Q9UKA4 1901 aa20.3■□□□□ 0.84
HERPUD1-215ENST00000568676 MED23Q9ULK4 1368 aa20.3■□□□□ 0.84
HERPUD1-215ENST00000568676 MYO3BQ8WXR4 1341 aa20.29■□□□□ 0.84
HERPUD1-215ENST00000568676 RASAL3Q86YV0 1011 aa20.29■□□□□ 0.84
HERPUD1-215ENST00000568676 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
HERPUD1-215ENST00000568676 ASTN2O75129 1339 aaPredicted RBP20.28■□□□□ 0.84
HERPUD1-215ENST00000568676 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
HERPUD1-215ENST00000568676 CTSWP56202 376 aa20.28■□□□□ 0.84
HERPUD1-215ENST00000568676 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
HERPUD1-215ENST00000568676 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
HERPUD1-215ENST00000568676 APAF1O14727 1248 aa20.27■□□□□ 0.84
HERPUD1-215ENST00000568676 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
HERPUD1-215ENST00000568676 KSR2Q6VAB6 950 aa20.27■□□□□ 0.84
HERPUD1-215ENST00000568676 PKN2Q16513 984 aaKnown RBP20.26■□□□□ 0.83
HERPUD1-215ENST00000568676 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
HERPUD1-215ENST00000568676 NF2P35240 595 aa20.25■□□□□ 0.83
HERPUD1-215ENST00000568676 STRIP1Q5VSL9 837 aa20.25■□□□□ 0.83
HERPUD1-215ENST00000568676 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
HERPUD1-215ENST00000568676 TTLL11Q8NHH1 800 aa20.25■□□□□ 0.83
HERPUD1-215ENST00000568676 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
HERPUD1-215ENST00000568676 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms