RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 VIL1P09327 827 aaKnown RBP15.41■□□□□ 0.06
GTF3C1-209ENST00000568569 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
GTF3C1-209ENST00000568569 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-209ENST00000568569 TBC1D16Q8TBP0 767 aa15.41■□□□□ 0.06
GTF3C1-209ENST00000568569 ZC3H12CQ9C0D7 883 aaKnown RBP15.41■□□□□ 0.06
GTF3C1-209ENST00000568569 ATP5J2-PTCD1G3V325 749 aa15.4■□□□□ 0.06
GTF3C1-209ENST00000568569 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
GTF3C1-209ENST00000568569 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
GTF3C1-209ENST00000568569 CTU1Q7Z7A3 348 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-209ENST00000568569 CDCA5Q96FF9 252 aa15.4■□□□□ 0.06
GTF3C1-209ENST00000568569 CSRNP1Q96S65 589 aa15.4■□□□□ 0.06
GTF3C1-209ENST00000568569 G3V3G9 751 aa15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 CHL1O00533 1208 aa15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 IRS4O14654 1257 aaPredicted RBP15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 HOXB7P09629 217 aa15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 RASAL3Q86YV0 1011 aa15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 PODXL2Q9NZ53 605 aa15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
GTF3C1-209ENST00000568569 ZNF609O15014 1411 aa15.38■□□□□ 0.05
GTF3C1-209ENST00000568569 UFL1O94874 794 aa15.38■□□□□ 0.05
GTF3C1-209ENST00000568569 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-209ENST00000568569 FKBP1BP68106 108 aa15.38■□□□□ 0.05
GTF3C1-209ENST00000568569 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-209ENST00000568569 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
GTF3C1-209ENST00000568569 TAF1P21675 1872 aa15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 HSP90B1P14625 803 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 ANGEL2Q5VTE6 544 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 PRPF38BQ5VTL8 546 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 RSBN1LQ6PCB5 846 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 AGBL3Q8NEM8 1001 aa15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 ANKIB1Q9P2G1 1089 aa15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 GGA1Q9UJY5 639 aa15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-209ENST00000568569 SCARF1Q14162 830 aa15.36■□□□□ 0.05
GTF3C1-209ENST00000568569 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-209ENST00000568569 ZBTB38Q8NAP3 1195 aaPredicted RBP15.36■□□□□ 0.05
GTF3C1-209ENST00000568569 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
GTF3C1-209ENST00000568569 LAS1LQ9Y4W2 734 aaKnown RBP15.36■□□□□ 0.05
GTF3C1-209ENST00000568569 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
GTF3C1-209ENST00000568569 COL4A1P02462 1669 aa15.35■□□□□ 0.05
GTF3C1-209ENST00000568569 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
GTF3C1-209ENST00000568569 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
GTF3C1-209ENST00000568569 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
GTF3C1-209ENST00000568569 MYOZ2Q9NPC6 264 aa15.34■□□□□ 0.05
GTF3C1-209ENST00000568569 SEC31BQ9NQW1 1179 aa15.34■□□□□ 0.05
GTF3C1-209ENST00000568569 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
GTF3C1-209ENST00000568569 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
GTF3C1-209ENST00000568569 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
GTF3C1-209ENST00000568569 RIC3Q7Z5B4 369 aa15.33■□□□□ 0.04
GTF3C1-209ENST00000568569 PAPPA2Q9BXP8 1791 aa15.33■□□□□ 0.04
GTF3C1-209ENST00000568569 POLR2AP24928 1970 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-209ENST00000568569 RALBP1Q15311 655 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 ZNF296Q8WUU4 475 aaPredicted RBP15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 GMLQ99445 158 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 AKAP11Q9UKA4 1901 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 SCN9AQ15858 1988 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 XDHP47989 1333 aa15.32■□□□□ 0.04
GTF3C1-209ENST00000568569 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
GTF3C1-209ENST00000568569 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
GTF3C1-209ENST00000568569 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
GTF3C1-209ENST00000568569 MKI67P46013 3256 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-209ENST00000568569 PDE8AO60658 829 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 ATP2B4P23634 1241 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 NOM1Q5C9Z4 860 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 MOB2Q70IA6 237 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 CCDC191Q8NCU4 936 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
GTF3C1-209ENST00000568569 UBE2Q2LH0YL09 131 aa15.29■□□□□ 0.04
GTF3C1-209ENST00000568569 PCCAP05165 728 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-209ENST00000568569 TTLL12Q14166 644 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-209ENST00000568569 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
GTF3C1-209ENST00000568569 NF2P35240 595 aa15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 TM4SF4P48230 202 aa15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 SREBF2Q12772 1141 aa15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 MYD88Q99836 296 aa15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 HTTP42858 3142 aa15.28■□□□□ 0.04
GTF3C1-209ENST00000568569 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 GPR25O00155 361 aa15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
GTF3C1-209ENST00000568569 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
GTF3C1-209ENST00000568569 WNT10BO00744 389 aa15.26■□□□□ 0.03
GTF3C1-209ENST00000568569 CFHR5Q9BXR6 569 aa15.26■□□□□ 0.03
GTF3C1-209ENST00000568569 PHAXQ9H814 394 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms