RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 USP42Q9H9J4 1324 aaKnown RBP7.62□□□□□ -1.19
GINS3-210ENST00000568468 ERVV-1B6SEH8 477 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 ALDH1L1O75891 902 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 UBTFL1P0CB47 393 aaPredicted RBP7.62□□□□□ -1.19
GINS3-210ENST00000568468 SUSD4Q5VX71 490 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 UBE3BQ7Z3V4 1068 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 NLRP10Q86W26 655 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 CCDC24Q8N4L8 307 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 FLAD1Q8NFF5 587 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 FAM89AQ96GI7 184 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 CWC25Q9NXE8 425 aaPredicted RBP7.62□□□□□ -1.19
GINS3-210ENST00000568468 PPP4R2Q9NY27 417 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 C9orf78Q9NZ63 289 aaPredicted RBP7.62□□□□□ -1.19
GINS3-210ENST00000568468 NARFQ9UHQ1 456 aa7.62□□□□□ -1.19
GINS3-210ENST00000568468 NIP7Q9Y221 180 aaKnown RBP eCLIP7.62□□□□□ -1.19
GINS3-210ENST00000568468 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 COL24A1Q17RW2 1714 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 GRM8O00222 908 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 IGHDP01880 384 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 GYS1P13807 737 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 EPHA10Q5JZY3 1008 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 NUTM1Q86Y26 1132 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 ZNF34Q8IZ26 560 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 CCDC136Q96JN2 1154 aa7.61□□□□□ -1.19
GINS3-210ENST00000568468 CCDC85AQ96PX6 553 aaPredicted RBP7.61□□□□□ -1.19
GINS3-210ENST00000568468 GNAI2P04899 355 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 GNAI3P08754 354 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 PBX2P40425 430 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 FOSBP53539 338 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 CASP7P55210 303 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 NFIXQ14938 502 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 CEP85Q6P2H3 762 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 SKAP1Q86WV1 359 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 SPNS2Q8IVW8 549 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 SIRT2Q8IXJ6 389 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 CCDC191Q8NCU4 936 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 BICC1Q9H694 974 aaKnown RBP7.6□□□□□ -1.19
GINS3-210ENST00000568468 TRMT112Q9UI30 125 aaKnown RBP7.6□□□□□ -1.19
GINS3-210ENST00000568468 ZNF652Q9Y2D9 606 aa7.6□□□□□ -1.19
GINS3-210ENST00000568468 PNMA6EA0A0J9YXQ4 647 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 H7C1W4 665 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 NTSR2O95665 410 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 HCLS1P14317 486 aaPredicted RBP7.59□□□□□ -1.19
GINS3-210ENST00000568468 DDR1Q08345 913 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 ERFEQ4G0M1 354 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 PPP4R3BQ5MIZ7 849 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 ANKRD44Q8N8A2 993 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 KAZALD1Q96I82 304 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 UTP14AQ9BVJ6 771 aaKnown RBP7.59□□□□□ -1.19
GINS3-210ENST00000568468 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 SCN7AQ01118 1682 aa7.59□□□□□ -1.19
GINS3-210ENST00000568468 ABCC12Q96J65 1359 aa7.59□□□□□ -1.2
GINS3-210ENST00000568468 C4AP0C0L4 1744 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 UTYO14607 1347 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 APBB1O00213 710 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 NPHP1O15259 732 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 PCCAP05165 728 aaPredicted RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 PARP10Q53GL7 1025 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 ERICH6BQ5W0A0 696 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 CLEC4GQ6UXB4 293 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 NBPF5PQ86XG9 351 aaPredicted RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 ZBTB38Q8NAP3 1195 aaPredicted RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 CHMP4BQ9H444 224 aaKnown RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 PA2G4Q9UQ80 394 aaKnown RBP7.58□□□□□ -1.2
GINS3-210ENST00000568468 BCORQ6W2J9 1755 aa7.58□□□□□ -1.2
GINS3-210ENST00000568468 MMP10P09238 476 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 GTF2E1P29083 439 aaPredicted RBP7.57□□□□□ -1.2
GINS3-210ENST00000568468 FOXO4P98177 505 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 LMBR1LQ6UX01 489 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 PPP1R42Q7Z4L9 355 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 PCDHGA10Q9Y5H3 936 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 CACNA1FO60840 1977 aa7.57□□□□□ -1.2
GINS3-210ENST00000568468 SH3TC1Q8TE82 1336 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 POLRMTO00411 1230 aaKnown RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 SRGAP3O43295 1099 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 SERPINB2P05120 415 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 POLD1P28340 1107 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 TM4SF1P30408 202 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 CTSWP56202 376 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 ATP8B2P98198 1209 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 FAM161AQ3B820 660 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 ZNF594Q96JF6 807 aaPredicted RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 SIL1Q9H173 461 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 PPP1R1BQ9UD71 204 aaPredicted RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 AFDNP55196 1824 aaKnown RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 CARMIL3Q8ND23 1372 aa7.56□□□□□ -1.2
GINS3-210ENST00000568468 N4BP2Q86UW6 1770 aaPredicted RBP7.56□□□□□ -1.2
GINS3-210ENST00000568468 KDM2BQ8NHM5 1336 aa7.55□□□□□ -1.2
GINS3-210ENST00000568468 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
GINS3-210ENST00000568468 SEMA3EO15041 775 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms