RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SCAND2PQ9GZW5 306 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-206ENST00000568294 USP27XA6NNY8 438 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 KINO60870 393 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 STOX1Q6ZVD7 989 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 MAP7D2Q96T17 732 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 HIP1O00291 1037 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 ATP2B1P20020 1258 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 TAF7LQ5H9L4 462 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 PI16Q6UXB8 463 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 USP28Q96RU2 1077 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 APPP05067 770 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 LRRC24Q50LG9 513 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 KRT28Q7Z3Y7 464 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 CHMP4CQ96CF2 233 aa10.54□□□□□ -0.72
HDGFL3-206ENST00000568294 ZNF75DP51815 510 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 DIP2BQ9P265 1576 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 CABP4P57796 275 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 TTLL7Q6ZT98 887 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 PROSER2Q86WR7 435 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 GTF3C6Q969F1 213 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 CCDC94Q9BW85 323 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 PUS3Q9BZE2 481 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 GOLPH3LQ9H4A5 285 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 NPHP3Q7Z494 1330 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 DIP2AQ14689 1571 aa10.53□□□□□ -0.72
HDGFL3-206ENST00000568294 A1BGP04217 495 aa10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 MARCKSP29966 332 aaPredicted RBP10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 GNL2Q13823 731 aaKnown RBP10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 ZSCAN25Q6NSZ9 544 aa10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 CLSTN2Q9H4D0 955 aa10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 SETD1AO15047 1707 aaKnown RBP10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 RGPD8O14715 1765 aaPredicted RBP10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 COL15A1P39059 1388 aa10.52□□□□□ -0.72
HDGFL3-206ENST00000568294 PTPN12Q05209 780 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 MCMDC2Q4G0Z9 681 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 TM6SF1Q9BZW5 370 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 TOMM22Q9NS69 142 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 HDAC5Q9UQL6 1122 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 CPLX1O14810 134 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 IFIT1P09914 478 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 GOLGA8FQ08AF8 430 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 GOLGA8DPQ0D2H9 430 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 PDIA6Q15084 440 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 STK38Q15208 465 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 DDX19AQ9NUU7 478 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.73
HDGFL3-206ENST00000568294 ANKLE2Q86XL3 938 aa10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 SKILP12757 684 aa10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 GPTP24298 496 aa10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 TERF1P54274 439 aa10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 STRN4Q9NRL3 753 aa10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 ZNF771Q7L3S4 317 aaPredicted RBP10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 METTL22Q9BUU2 404 aaPredicted RBP10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 PAG1Q9NWQ8 432 aa10.51□□□□□ -0.73
HDGFL3-206ENST00000568294 AKAP12Q02952 1782 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 GOLGA8BA8MQT2 603 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 RESTQ13127 1097 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 ARHGEF25Q86VW2 580 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 AIFM3Q96NN9 605 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 DENND2AQ9ULE3 1009 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 ZNF609O15014 1411 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 CCDC69A6NI79 296 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 HOXB7P09629 217 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 ADORA1P30542 326 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 MTX1Q13505 466 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 MYL10Q9BUA6 226 aa10.5□□□□□ -0.73
HDGFL3-206ENST00000568294 SPECC1Q5M775 1068 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 TMC6Q7Z403 805 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 SLC52A2Q9HAB3 445 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 CFAP45Q9UL16 551 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 LMOD1P29536 600 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 CEP135Q66GS9 1140 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 NSUN7Q8NE18 718 aaKnown RBP10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 PIK3C2AO00443 1686 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 KLF18A0A0U1RQI7 1052 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 KRT32Q14532 448 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 HOMER1Q86YM7 354 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 SYNE4Q8N205 404 aa10.49□□□□□ -0.73
HDGFL3-206ENST00000568294 E7EWF7 191 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 M0R2C6 588 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 SNRPA1P09661 255 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 RRP12Q5JTH9 1297 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 CREBRFQ8IUR6 639 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 CLIC4Q9Y696 253 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 AGLP35573 1532 aa10.48□□□□□ -0.73
HDGFL3-206ENST00000568294 A0A0U1RQG5 324 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms