RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
CDH3-207ENST00000568292 PTPRCP08575 1304 aa13.02□□□□□ -0.33
CDH3-207ENST00000568292 RTL9Q8NET4 1388 aa13.02□□□□□ -0.33
CDH3-207ENST00000568292 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 UFL1O94874 794 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 EPS15P42566 896 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 FOXO4P98177 505 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 MPHOSPH8Q99549 860 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 DBNDD1Q9H9R9 158 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 XDHP47989 1333 aa13.01□□□□□ -0.33
CDH3-207ENST00000568292 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
CDH3-207ENST00000568292 TAF1P21675 1872 aa13□□□□□ -0.33
CDH3-207ENST00000568292 COL4A5P29400 1685 aa13□□□□□ -0.33
CDH3-207ENST00000568292 YDJCA8MPS7 323 aa13□□□□□ -0.33
CDH3-207ENST00000568292 ECE2O60344 883 aa13□□□□□ -0.33
CDH3-207ENST00000568292 SCNN1DP51172 638 aa13□□□□□ -0.33
CDH3-207ENST00000568292 IFIT5Q13325 482 aaKnown RBP13□□□□□ -0.33
CDH3-207ENST00000568292 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
CDH3-207ENST00000568292 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
CDH3-207ENST00000568292 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
CDH3-207ENST00000568292 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
CDH3-207ENST00000568292 GPRC5DQ9NZD1 345 aa13□□□□□ -0.33
CDH3-207ENST00000568292 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
CDH3-207ENST00000568292 GMPSP49915 693 aaPredicted RBP12.99□□□□□ -0.33
CDH3-207ENST00000568292 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
CDH3-207ENST00000568292 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
CDH3-207ENST00000568292 DPF2Q92785 391 aa12.99□□□□□ -0.33
CDH3-207ENST00000568292 GPR101Q96P66 508 aaPredicted RBP12.99□□□□□ -0.33
CDH3-207ENST00000568292 ADARB2Q9NS39 739 aaKnown RBP12.99□□□□□ -0.33
CDH3-207ENST00000568292 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
CDH3-207ENST00000568292 SCN4AP35499 1836 aa12.98□□□□□ -0.33
CDH3-207ENST00000568292 H7C1D1 291 aa12.98□□□□□ -0.33
CDH3-207ENST00000568292 PSMD14O00487 310 aa12.98□□□□□ -0.33
CDH3-207ENST00000568292 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
CDH3-207ENST00000568292 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
CDH3-207ENST00000568292 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
CDH3-207ENST00000568292 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
CDH3-207ENST00000568292 CNOT7Q9UIV1 285 aaKnown RBP12.98□□□□□ -0.33
CDH3-207ENST00000568292 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
CDH3-207ENST00000568292 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
CDH3-207ENST00000568292 RPS12P25398 132 aaKnown RBP12.97□□□□□ -0.33
CDH3-207ENST00000568292 HTRA3P83110 453 aa12.97□□□□□ -0.33
CDH3-207ENST00000568292 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH3-207ENST00000568292 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
CDH3-207ENST00000568292 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
CDH3-207ENST00000568292 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
CDH3-207ENST00000568292 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
CDH3-207ENST00000568292 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
CDH3-207ENST00000568292 COL4A1P02462 1669 aa12.96□□□□□ -0.33
CDH3-207ENST00000568292 UTYO14607 1347 aa12.96□□□□□ -0.33
CDH3-207ENST00000568292 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
CDH3-207ENST00000568292 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
CDH3-207ENST00000568292 CHRNDQ07001 517 aa12.96□□□□□ -0.33
CDH3-207ENST00000568292 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
CDH3-207ENST00000568292 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.33
CDH3-207ENST00000568292 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
CDH3-207ENST00000568292 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
CDH3-207ENST00000568292 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
CDH3-207ENST00000568292 LRRC37AA6NMS7 1700 aa12.96□□□□□ -0.34
CDH3-207ENST00000568292 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
CDH3-207ENST00000568292 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
CDH3-207ENST00000568292 KCNJ4P48050 445 aa12.95□□□□□ -0.34
CDH3-207ENST00000568292 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
CDH3-207ENST00000568292 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
CDH3-207ENST00000568292 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
CDH3-207ENST00000568292 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
CDH3-207ENST00000568292 PASKQ96RG2 1323 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
CDH3-207ENST00000568292 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 ARHGAP45Q92619 1136 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 HDAC5Q9UQL6 1122 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
CDH3-207ENST00000568292 TMEM88BA6NKF7 163 aa12.93□□□□□ -0.34
CDH3-207ENST00000568292 IPO8O15397 1037 aaKnown RBP12.93□□□□□ -0.34
CDH3-207ENST00000568292 PLIN1O60240 522 aa12.93□□□□□ -0.34
CDH3-207ENST00000568292 TAF5LO75529 589 aa12.93□□□□□ -0.34
CDH3-207ENST00000568292 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
CDH3-207ENST00000568292 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
CDH3-207ENST00000568292 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
CDH3-207ENST00000568292 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
CDH3-207ENST00000568292 KAZALD1Q96I82 304 aa12.93□□□□□ -0.34
CDH3-207ENST00000568292 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
CDH3-207ENST00000568292 HIRAP54198 1017 aaPredicted RBP12.92□□□□□ -0.34
CDH3-207ENST00000568292 RABL6Q3YEC7 729 aaPredicted RBP12.92□□□□□ -0.34
CDH3-207ENST00000568292 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
CDH3-207ENST00000568292 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
CDH3-207ENST00000568292 BICC1Q9H694 974 aaKnown RBP12.92□□□□□ -0.34
CDH3-207ENST00000568292 TBC1D10BQ4KMP7 808 aaPredicted RBP12.91□□□□□ -0.34
CDH3-207ENST00000568292 STRIP1Q5VSL9 837 aa12.91□□□□□ -0.34
CDH3-207ENST00000568292 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms