RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 E2F4Q16254 413 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 CCDC70Q6NSX1 233 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 PTCH1Q13635 1447 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 SBNO2Q9Y2G9 1366 aa12.58□□□□□ -0.4
PALB2-206ENST00000568219 STX17P56962 302 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 TTC14Q96N46 770 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 EYA1Q99502 592 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 MTX1Q13505 466 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
PALB2-206ENST00000568219 SYCP1Q15431 976 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 ZNF569Q5MCW4 686 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 SSH3Q8TE77 659 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 BAG1Q99933 345 aaPredicted RBP12.57□□□□□ -0.4
PALB2-206ENST00000568219 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
PALB2-206ENST00000568219 ACEP12821 1306 aa12.57□□□□□ -0.4
PALB2-206ENST00000568219 ATP5J2-PTCD1G3V325 749 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
PALB2-206ENST00000568219 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
PALB2-206ENST00000568219 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 ATP1A3P13637 1013 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 RDXP35241 583 aaKnown RBP12.56□□□□□ -0.4
PALB2-206ENST00000568219 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.4
PALB2-206ENST00000568219 ANKRD20A12PQ8NF67 263 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 MYO1CO00159 1063 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 MYD88Q99836 296 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 PDE11AQ9HCR9 933 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
PALB2-206ENST00000568219 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 DNA2P51530 1060 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 NDUFA8P51970 172 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
PALB2-206ENST00000568219 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 ZNF202O95125 648 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 WWC2Q6AWC2 1192 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
PALB2-206ENST00000568219 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 LONRF3Q496Y0 759 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 FUCA2Q9BTY2 467 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 TM6SF1Q9BZW5 370 aa12.55□□□□□ -0.4
PALB2-206ENST00000568219 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 MICU3Q86XE3 530 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 KIAA0754O94854 1291 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 IVLP07476 585 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
PALB2-206ENST00000568219 TRMT44Q8IYL2 757 aaKnown RBP12.54□□□□□ -0.4
PALB2-206ENST00000568219 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
PALB2-206ENST00000568219 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 CHMP4BP1P59074 171 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 TLR7Q9NYK1 1049 aaKnown RBP12.54□□□□□ -0.4
PALB2-206ENST00000568219 RRP15Q9Y3B9 282 aaKnown RBP12.54□□□□□ -0.4
PALB2-206ENST00000568219 TTC37Q6PGP7 1564 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 KCNG4Q8TDN1 519 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
PALB2-206ENST00000568219 FANCAO15360 1455 aa12.54□□□□□ -0.4
PALB2-206ENST00000568219 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 YTHDC2Q9H6S0 1430 aaKnown RBP12.53□□□□□ -0.4
PALB2-206ENST00000568219 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 A0A1B0GUL7 405 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 AFMP43652 599 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
PALB2-206ENST00000568219 ADAM21Q9UKJ8 722 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 MYL5Q02045 173 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 PARD6BQ9BYG5 372 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
PALB2-206ENST00000568219 GJB4Q9NTQ9 266 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 ELP1O95163 1332 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 CYP2C19P33261 490 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 RNF187Q5TA31 235 aaPredicted RBP12.53□□□□□ -0.4
PALB2-206ENST00000568219 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
PALB2-206ENST00000568219 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
PALB2-206ENST00000568219 SSH2Q76I76 1423 aa12.52□□□□□ -0.4
PALB2-206ENST00000568219 MCMDC2Q4G0Z9 681 aa12.52□□□□□ -0.4
PALB2-206ENST00000568219 FANCLQ9NW38 375 aa12.52□□□□□ -0.4
PALB2-206ENST00000568219 IMPACTQ9P2X3 320 aa12.52□□□□□ -0.4
PALB2-206ENST00000568219 FEZ2Q9UHY8 353 aaPredicted RBP12.52□□□□□ -0.4
PALB2-206ENST00000568219 KCNQ3O43525 872 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 CCDC175P0C221 793 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 SCRN1Q12765 414 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.41
PALB2-206ENST00000568219 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms