RNA–Protein interactions for RNA: ENST00000568206.1

HERC2-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-210ENST00000568206 CHMP5Q9NZZ3 219 aa23.28■■□□□ 1.32
HERC2-210ENST00000568206 C4BP0C0L5 1744 aa23.27■■□□□ 1.32
HERC2-210ENST00000568206 CCDC171Q6TFL3 1326 aa23.27■■□□□ 1.32
HERC2-210ENST00000568206 EDC3Q96F86 508 aaKnown RBP23.27■■□□□ 1.32
HERC2-210ENST00000568206 MED23Q9ULK4 1368 aa23.27■■□□□ 1.32
HERC2-210ENST00000568206 TTC39AQ5SRH9 613 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 NYXQ9GZU5 481 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 A0A0D9SFI3 127 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 PDE8BO95263 885 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 NEK4P51957 841 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 USPL1Q5W0Q7 1092 aa23.26■■□□□ 1.31
HERC2-210ENST00000568206 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
HERC2-210ENST00000568206 DDX46Q7L014 1031 aaKnown RBP23.25■■□□□ 1.31
HERC2-210ENST00000568206 MPHOSPH8Q99549 860 aa23.25■■□□□ 1.31
HERC2-210ENST00000568206 BCL2L12Q9HB09 334 aa23.25■■□□□ 1.31
HERC2-210ENST00000568206 CIZ1Q9ULV3 898 aaPredicted RBP23.25■■□□□ 1.31
HERC2-210ENST00000568206 GOLIM4O00461 696 aa23.24■■□□□ 1.31
HERC2-210ENST00000568206 PRKCSHP14314 528 aaPredicted RBP23.24■■□□□ 1.31
HERC2-210ENST00000568206 HMGB2P26583 209 aaKnown RBP23.24■■□□□ 1.31
HERC2-210ENST00000568206 LRRFIP1Q32MZ4 808 aaKnown RBP23.24■■□□□ 1.31
HERC2-210ENST00000568206 TBC1D9BQ66K14 1250 aa23.24■■□□□ 1.31
HERC2-210ENST00000568206 SETDB2Q96T68 719 aa23.24■■□□□ 1.31
HERC2-210ENST00000568206 BRWD3Q6RI45 1802 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 ADORA1P30542 326 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 IGHMBP2P38935 993 aaKnown RBP23.23■■□□□ 1.31
HERC2-210ENST00000568206 PTH1RQ03431 593 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 NDUFB9Q9Y6M9 179 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 DDIT3P35638 169 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 PUM3Q15397 648 aaKnown RBP23.23■■□□□ 1.31
HERC2-210ENST00000568206 COL24A1Q17RW2 1714 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 SLC27A3Q5K4L6 730 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
HERC2-210ENST00000568206 MAP4K1Q92918 833 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 ZNF512BQ96KM6 892 aaPredicted RBP23.23■■□□□ 1.31
HERC2-210ENST00000568206 SNX14Q9Y5W7 946 aa23.23■■□□□ 1.31
HERC2-210ENST00000568206 ADRA2BP18089 450 aa23.22■■□□□ 1.31
HERC2-210ENST00000568206 RBM6P78332 1123 aaKnown RBP23.22■■□□□ 1.31
HERC2-210ENST00000568206 KCNB2Q92953 911 aa23.22■■□□□ 1.31
HERC2-210ENST00000568206 CDC5LQ99459 802 aaKnown RBP23.22■■□□□ 1.31
HERC2-210ENST00000568206 GTF2E1P29083 439 aaPredicted RBP23.21■■□□□ 1.31
HERC2-210ENST00000568206 SF3B3Q15393 1217 aaKnown RBP23.21■■□□□ 1.31
HERC2-210ENST00000568206 ERFEQ4G0M1 354 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 SLC10A5Q5PT55 438 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 LPIN2Q92539 896 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 SRP68Q9UHB9 627 aaKnown RBP23.21■■□□□ 1.31
HERC2-210ENST00000568206 RFC4P35249 363 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 KCNJ4P48050 445 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 MCMDC2Q4G0Z9 681 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 BICDL1Q6ZP65 573 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 SEC31BQ9NQW1 1179 aa23.21■■□□□ 1.31
HERC2-210ENST00000568206 ZKSCAN1P17029 563 aaPredicted RBP23.2■■□□□ 1.3
HERC2-210ENST00000568206 NECTIN1Q15223 517 aa23.2■■□□□ 1.3
HERC2-210ENST00000568206 HELLSQ9NRZ9 838 aa23.2■■□□□ 1.3
HERC2-210ENST00000568206 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
HERC2-210ENST00000568206 RBM8AQ9Y5S9 174 aaKnown RBP23.2■■□□□ 1.3
HERC2-210ENST00000568206 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
HERC2-210ENST00000568206 ARAP2Q8WZ64 1704 aa23.19■■□□□ 1.3
HERC2-210ENST00000568206 LRRC4BQ9NT99 713 aa23.19■■□□□ 1.3
HERC2-210ENST00000568206 SLC5A1P13866 664 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 FGFR2P21802 821 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 FKBP4Q02790 459 aaKnown RBP eCLIP23.18■■□□□ 1.3
HERC2-210ENST00000568206 PRPF40BQ6NWY9 871 aaKnown RBP23.18■■□□□ 1.3
HERC2-210ENST00000568206 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 ZNF589Q86UQ0 364 aaPredicted RBP23.18■■□□□ 1.3
HERC2-210ENST00000568206 NBPF5PQ86XG9 351 aaPredicted RBP23.18■■□□□ 1.3
HERC2-210ENST00000568206 TAF5LO75529 589 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 SSFA2P28290 1259 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 TPTE2Q6XPS3 522 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 RASEFQ8IZ41 740 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 TM6SF1Q9BZW5 370 aa23.18■■□□□ 1.3
HERC2-210ENST00000568206 ZFYP08048 801 aaPredicted RBP23.17■■□□□ 1.3
HERC2-210ENST00000568206 UQCRFS1P1P0C7P4 283 aa23.17■■□□□ 1.3
HERC2-210ENST00000568206 HMG20BQ9P0W2 317 aa23.17■■□□□ 1.3
HERC2-210ENST00000568206 RNF113AO15541 343 aaKnown RBP23.16■■□□□ 1.3
HERC2-210ENST00000568206 TRIM37O94972 964 aa23.16■■□□□ 1.3
HERC2-210ENST00000568206 ZMYM1Q5SVZ6 1142 aa23.16■■□□□ 1.3
HERC2-210ENST00000568206 CREB3L3Q68CJ9 461 aa23.16■■□□□ 1.3
HERC2-210ENST00000568206 UPF3BQ9BZI7 483 aaKnown RBP23.16■■□□□ 1.3
HERC2-210ENST00000568206 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
HERC2-210ENST00000568206 AMIGO3Q86WK7 504 aa23.16■■□□□ 1.3
HERC2-210ENST00000568206 ANKRD18AQ8IVF6 992 aa23.16■■□□□ 1.3
HERC2-210ENST00000568206 PHF14O94880 888 aa23.15■■□□□ 1.3
HERC2-210ENST00000568206 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
HERC2-210ENST00000568206 ARID4AP29374 1257 aaPredicted RBP23.15■■□□□ 1.3
HERC2-210ENST00000568206 TTF1Q15361 905 aaPredicted RBP23.15■■□□□ 1.3
HERC2-210ENST00000568206 SLC27A2O14975 620 aa23.14■■□□□ 1.29
HERC2-210ENST00000568206 PSMA5P28066 241 aa23.14■■□□□ 1.29
HERC2-210ENST00000568206 ZAP70P43403 619 aa23.14■■□□□ 1.29
HERC2-210ENST00000568206 CCDC102BQ68D86 513 aa23.14■■□□□ 1.29
HERC2-210ENST00000568206 HELBQ8NG08 1087 aaPredicted RBP23.14■■□□□ 1.29
HERC2-210ENST00000568206 TMX3Q96JJ7 454 aa23.14■■□□□ 1.29
HERC2-210ENST00000568206 U3KPZ7 1027 aaPredicted RBP23.14■■□□□ 1.29
HERC2-210ENST00000568206 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.29
HERC2-210ENST00000568206 CASZ1Q86V15 1759 aa23.13■■□□□ 1.29
HERC2-210ENST00000568206 MCAMP43121 646 aa23.13■■□□□ 1.29
HERC2-210ENST00000568206 SCARF1Q14162 830 aa23.13■■□□□ 1.29
HERC2-210ENST00000568206 RTN4Q9NQC3 1192 aaKnown RBP23.13■■□□□ 1.29
HERC2-210ENST00000568206 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms