RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ADAM23O75077 832 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 KIF4AO95239 1232 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 PSAPP07602 524 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 PLAURQ03405 335 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 PDE3BQ13370 1112 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 TTC39BQ5VTQ0 682 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 NSUN5Q96P11 429 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 ZFYVE28Q9HCC9 887 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 SALL4Q9UJQ4 1053 aa7.08□□□□□ -1.28
HERPUD1-212ENST00000567944 LOC102724428A0A0B4J2F2 783 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 SIK1P57059 783 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 TBC1D8BQ0IIM8 1120 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 COL9A3Q14050 684 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 CHSY3Q70JA7 882 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 SNX29Q8TEQ0 813 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 KANSL3Q9P2N6 904 aa7.07□□□□□ -1.28
HERPUD1-212ENST00000567944 ALBP02768 609 aa7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 SNRPNP63162 240 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 PERM1Q5SV97 790 aa7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 TTC16Q8NEE8 873 aa7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 TMC1Q8TDI8 760 aa7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
HERPUD1-212ENST00000567944 PHACTR2O75167 634 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 CPB1P15086 417 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 ACPPP15309 386 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 CES1P23141 567 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 DGKGP49619 791 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 MAP3K10Q02779 954 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 FMR1Q06787 632 aaKnown RBP eCLIP7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 CCDC27Q2M243 656 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 ADAMTSL4Q6UY14 1074 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 LINC00114Q6XXX2 140 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 C8orf86Q6ZUL3 223 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 ILDR2Q71H61 639 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 MICALL1Q8N3F8 863 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 CEP120Q8N960 986 aa7.05□□□□□ -1.28
HERPUD1-212ENST00000567944 ANKRD33BA6NCL7 494 aa7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 NFKBIEO00221 500 aa7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 POLR3DP05423 398 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 ALAS2P22557 587 aa7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 HYAL2Q12891 473 aa7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 GRIK5Q16478 980 aa7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 PEAR1Q5VY43 1037 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-212ENST00000567944 MSTNO14793 375 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 P4HBP07237 508 aaKnown RBP7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 ATP11AP98196 1134 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 PCSK7Q16549 785 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 PLA2G4EQ3MJ16 856 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 PSAPL1Q6NUJ1 521 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 ZSCAN29Q8IWY8 852 aaPredicted RBP7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 CSRNP1Q96S65 589 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 SETDB2Q96T68 719 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 LATS2Q9NRM7 1088 aa7.03□□□□□ -1.28
HERPUD1-212ENST00000567944 PHF20L1A8MW92 1017 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 M0R082 166 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 TRPA1O75762 1119 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 ITGB2P05107 769 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 ENOX2Q16206 610 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 GALNT12Q8IXK2 581 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 NEDD1Q8NHV4 660 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 ZNF417Q8TAU3 575 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 NUDT8Q8WV74 236 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 PMEPA1Q969W9 287 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 HHIPQ96QV1 700 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 ZNF587Q96SQ5 575 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 DNAJC25Q9H1X3 360 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 ENAMQ9NRM1 1142 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 FRRS1LQ9P0K9 344 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 AMOTL2Q9Y2J4 779 aa7.02□□□□□ -1.29
HERPUD1-212ENST00000567944 CPNE3O75131 537 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 EIF2AK2P19525 551 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 AFF1P51825 1210 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 TTC9Q92623 222 aa7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 PLD4Q96BZ4 506 aa7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 SMG9Q9H0W8 520 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 RASSF4Q9H2L5 321 aa7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 WWC3Q9ULE0 1092 aa7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 CNTNAP5Q8WYK1 1306 aa7.01□□□□□ -1.29
HERPUD1-212ENST00000567944 NID1P14543 1247 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 AMPD1P23109 780 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 BAG6P46379 1132 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 MFAP1P55081 439 aaKnown RBP7□□□□□ -1.29
HERPUD1-212ENST00000567944 ELMSAN1Q6PJG2 1045 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 NCAPG2Q86XI2 1143 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 CCDC74AQ96AQ1 378 aa7□□□□□ -1.29
HERPUD1-212ENST00000567944 ZKSCAN3Q9BRR0 538 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms