RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 PGAP2Q9UHJ9 254 aa14.24□□□□□ -0.13
CDH3-206ENST00000567674 XDHP47989 1333 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 TCERG1O14776 1098 aaKnown RBP14.23□□□□□ -0.13
CDH3-206ENST00000567674 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 SCNN1DP51172 638 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 G2E3Q7L622 706 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 TBC1D16Q8TBP0 767 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 ZNF609O15014 1411 aa14.23□□□□□ -0.13
CDH3-206ENST00000567674 PTPRCP08575 1304 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 ITGBL1O95965 494 aaPredicted RBP14.22□□□□□ -0.13
CDH3-206ENST00000567674 CASP7P55210 303 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 BEND3Q5T5X7 828 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 PODNQ7Z5L7 613 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
CDH3-206ENST00000567674 POLLQ9UGP5 575 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 GGA1Q9UJY5 639 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 LEMD3Q9Y2U8 911 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 GJA3Q9Y6H8 435 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 ADAMTSL1Q8N6G6 1762 aa14.22□□□□□ -0.13
CDH3-206ENST00000567674 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 C6orf229H3BNL8 230 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 GPSM2P81274 684 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 CWF19L2Q2TBE0 894 aaKnown RBP14.21□□□□□ -0.13
CDH3-206ENST00000567674 RTL5Q5HYW3 569 aaPredicted RBP14.21□□□□□ -0.13
CDH3-206ENST00000567674 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
CDH3-206ENST00000567674 CNTROBQ8N137 903 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 ANKRD2Q9GZV1 360 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
CDH3-206ENST00000567674 SALL2Q9Y467 1007 aaPredicted RBP14.21□□□□□ -0.13
CDH3-206ENST00000567674 COL4A5P29400 1685 aa14.2□□□□□ -0.14
CDH3-206ENST00000567674 H7C1D1 291 aa14.2□□□□□ -0.14
CDH3-206ENST00000567674 VIL1P09327 827 aaKnown RBP14.2□□□□□ -0.14
CDH3-206ENST00000567674 IGHMBP2P38935 993 aaKnown RBP14.2□□□□□ -0.14
CDH3-206ENST00000567674 BRPF1P55201 1214 aaPredicted RBP14.2□□□□□ -0.14
CDH3-206ENST00000567674 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
CDH3-206ENST00000567674 SEC31BQ9NQW1 1179 aa14.2□□□□□ -0.14
CDH3-206ENST00000567674 LTBP1Q14766 1721 aa14.19□□□□□ -0.14
CDH3-206ENST00000567674 DUOX1Q9NRD9 1551 aa14.19□□□□□ -0.14
CDH3-206ENST00000567674 EAPPQ56P03 285 aaPredicted RBP14.19□□□□□ -0.14
CDH3-206ENST00000567674 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
CDH3-206ENST00000567674 AGBL3Q8NEM8 1001 aa14.19□□□□□ -0.14
CDH3-206ENST00000567674 MINPP1Q9UNW1 487 aa14.19□□□□□ -0.14
CDH3-206ENST00000567674 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
CDH3-206ENST00000567674 UTYO14607 1347 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 GRM8O00222 908 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 EPS15P42566 896 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 MPHOSPH8Q99549 860 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 SRCIN1Q9C0H9 1055 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 GREM2Q9H772 168 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 MED23Q9ULK4 1368 aa14.18□□□□□ -0.14
CDH3-206ENST00000567674 WDR33Q9C0J8 1336 aaKnown RBP14.17□□□□□ -0.14
CDH3-206ENST00000567674 MYH3P11055 1940 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 ANKRD18BA2A2Z9 1011 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 YDJCA8MPS7 323 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 G3V3G9 751 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 UFL1O94874 794 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 ITGA6P23229 1130 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 GMPSP49915 693 aaPredicted RBP14.17□□□□□ -0.14
CDH3-206ENST00000567674 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 C15orf52Q6ZUT6 534 aaKnown RBP14.17□□□□□ -0.14
CDH3-206ENST00000567674 HHIPL1Q96JK4 782 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 COA1Q9GZY4 146 aa14.17□□□□□ -0.14
CDH3-206ENST00000567674 CNOT7Q9UIV1 285 aaKnown RBP14.17□□□□□ -0.14
CDH3-206ENST00000567674 MYO3BQ8WXR4 1341 aa14.16□□□□□ -0.14
CDH3-206ENST00000567674 ECE2O60344 883 aa14.16□□□□□ -0.14
CDH3-206ENST00000567674 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
CDH3-206ENST00000567674 IFIT5Q13325 482 aaKnown RBP14.16□□□□□ -0.14
CDH3-206ENST00000567674 CDC37L1Q7L3B6 337 aa14.16□□□□□ -0.14
CDH3-206ENST00000567674 HDAC5Q9UQL6 1122 aa14.16□□□□□ -0.14
CDH3-206ENST00000567674 RAD17O75943 681 aa14.15□□□□□ -0.14
CDH3-206ENST00000567674 FOXO4P98177 505 aa14.15□□□□□ -0.14
CDH3-206ENST00000567674 MRPL50Q8N5N7 158 aaKnown RBP14.15□□□□□ -0.14
CDH3-206ENST00000567674 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
CDH3-206ENST00000567674 PSMD14O00487 310 aa14.14□□□□□ -0.15
CDH3-206ENST00000567674 ZNF280AP59817 542 aaPredicted RBP14.14□□□□□ -0.15
CDH3-206ENST00000567674 CCDC57Q2TAC2 916 aa14.14□□□□□ -0.15
CDH3-206ENST00000567674 DBNDD1Q9H9R9 158 aa14.14□□□□□ -0.15
CDH3-206ENST00000567674 TAF1P21675 1872 aa14.14□□□□□ -0.15
CDH3-206ENST00000567674 THSD7BQ9C0I4 1608 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 USP17L4A6NCW7 530 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 STRIP1Q5VSL9 837 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 MAP1SQ66K74 1059 aaPredicted RBP14.13□□□□□ -0.15
CDH3-206ENST00000567674 RSBN1LQ6PCB5 846 aaPredicted RBP14.13□□□□□ -0.15
CDH3-206ENST00000567674 USP17L1Q7RTZ2 530 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
CDH3-206ENST00000567674 ABT1Q9ULW3 272 aaKnown RBP14.13□□□□□ -0.15
CDH3-206ENST00000567674 TNRC18O15417 2968 aaPredicted RBP14.12□□□□□ -0.15
CDH3-206ENST00000567674 F6X3S4 739 aa14.12□□□□□ -0.15
CDH3-206ENST00000567674 RABL6Q3YEC7 729 aaPredicted RBP14.12□□□□□ -0.15
CDH3-206ENST00000567674 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
CDH3-206ENST00000567674 JARID2Q92833 1246 aaPredicted RBP14.12□□□□□ -0.15
CDH3-206ENST00000567674 GMLQ99445 158 aa14.12□□□□□ -0.15
CDH3-206ENST00000567674 ZNF804BA4D1E1 1349 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms