RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 CDC5LQ99459 802 aaKnown RBP8.81□□□□□ -1
SF3B3-209ENST00000567635 EYA3Q99504 573 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 ZC3H12CQ9C0D7 883 aaKnown RBP8.81□□□□□ -1
SF3B3-209ENST00000567635 PODXL2Q9NZ53 605 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 ANKIB1Q9P2G1 1089 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 COL4A1P02462 1669 aa8.81□□□□□ -1
SF3B3-209ENST00000567635 E9PSI1 815 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 F6X3S4 739 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 G3V3G9 751 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 GMPSP49915 693 aaPredicted RBP8.8□□□□□ -1
SF3B3-209ENST00000567635 SCNN1DP51172 638 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 DCAF8Q5TAQ9 597 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 USP50Q70EL3 339 aaPredicted RBP8.8□□□□□ -1
SF3B3-209ENST00000567635 CNTROBQ8N137 903 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 PLA2G12BQ9BX93 195 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 BCL2L13Q9BXK5 485 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 GREM2Q9H772 168 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 BSDC1Q9NW68 430 aaPredicted RBP8.8□□□□□ -1
SF3B3-209ENST00000567635 GPRC5DQ9NZD1 345 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 GGA1Q9UJY5 639 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 PASKQ96RG2 1323 aa8.8□□□□□ -1
SF3B3-209ENST00000567635 SCN9AQ15858 1988 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 ADAMTSL1Q8N6G6 1762 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 DUOX1Q9NRD9 1551 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 RTL9Q8NET4 1388 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 YDJCA8MPS7 323 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 UFL1O94874 794 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 CSF1RP07333 972 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 CASP7P55210 303 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 SLFN5Q08AF3 891 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 DOK7Q18PE1 504 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 BEND3Q5T5X7 828 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 MAP1SQ66K74 1059 aaPredicted RBP8.79□□□□□ -1
SF3B3-209ENST00000567635 DBNDD1Q9H9R9 158 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 CREBZFQ9NS37 354 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 ADARB2Q9NS39 739 aaKnown RBP8.79□□□□□ -1
SF3B3-209ENST00000567635 CNOT7Q9UIV1 285 aaKnown RBP8.79□□□□□ -1
SF3B3-209ENST00000567635 MINPP1Q9UNW1 487 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 LTBP1Q14766 1721 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 XDHP47989 1333 aa8.79□□□□□ -1
SF3B3-209ENST00000567635 H7C1D1 291 aa8.78□□□□□ -1
SF3B3-209ENST00000567635 PSMD14O00487 310 aa8.78□□□□□ -1
SF3B3-209ENST00000567635 ECE2O60344 883 aa8.78□□□□□ -1
SF3B3-209ENST00000567635 ATP2B4P23634 1241 aa8.78□□□□□ -1
SF3B3-209ENST00000567635 IGHMBP2P38935 993 aaKnown RBP8.78□□□□□ -1
SF3B3-209ENST00000567635 JMYQ8N9B5 988 aa8.78□□□□□ -1
SF3B3-209ENST00000567635 GPR101Q96P66 508 aaPredicted RBP8.78□□□□□ -1
SF3B3-209ENST00000567635 KCNQ5Q9NR82 932 aa8.78□□□□□ -1
SF3B3-209ENST00000567635 PSME4Q14997 1843 aa8.77□□□□□ -1
SF3B3-209ENST00000567635 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 ALDH1L1O75891 902 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 VIL1P09327 827 aaKnown RBP8.77□□□□□ -1.01
SF3B3-209ENST00000567635 ITGA6P23229 1130 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 FOXO4P98177 505 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 SLC4A10Q6U841 1118 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
SF3B3-209ENST00000567635 DPF2Q92785 391 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 MPHOSPH8Q99549 860 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 SRCIN1Q9C0H9 1055 aa8.77□□□□□ -1.01
SF3B3-209ENST00000567635 C9orf78Q9NZ63 289 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-209ENST00000567635 ANKRD18BA2A2Z9 1011 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 WTIPA6NIX2 430 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 GRM8O00222 908 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 RPS12P25398 132 aaKnown RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 CCT4P50991 539 aaKnown RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 HIRAP54198 1017 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 IFIT5Q13325 482 aaKnown RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 MICALL2Q8IY33 904 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 TRMT2AQ8IZ69 625 aaKnown RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 ZC3H15Q8WU90 426 aaKnown RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 ANKRD2Q9GZV1 360 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 PGAP2Q9UHJ9 254 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 LEMD3Q9Y2U8 911 aa8.76□□□□□ -1.01
SF3B3-209ENST00000567635 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-209ENST00000567635 SHTN1A0MZ66 631 aa8.75□□□□□ -1.01
SF3B3-209ENST00000567635 CCDC57Q2TAC2 916 aa8.75□□□□□ -1.01
SF3B3-209ENST00000567635 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
SF3B3-209ENST00000567635 PODNQ7Z5L7 613 aa8.75□□□□□ -1.01
SF3B3-209ENST00000567635 SSH1Q8WYL5 1049 aa8.75□□□□□ -1.01
SF3B3-209ENST00000567635 MKRN1Q9UHC7 482 aaKnown RBP8.75□□□□□ -1.01
SF3B3-209ENST00000567635 CHMP3Q9Y3E7 222 aa8.75□□□□□ -1.01
SF3B3-209ENST00000567635 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 USP17L4A6NCW7 530 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 CAPN15O75808 1086 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 FMR1Q06787 632 aaKnown RBP eCLIP8.74□□□□□ -1.011e-6■■■□□ 16.7
SF3B3-209ENST00000567635 DEFB115Q30KQ5 88 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 ALDH1L2Q3SY69 923 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 TBC1D10BQ4KMP7 808 aaPredicted RBP8.74□□□□□ -1.01
SF3B3-209ENST00000567635 EPHA10Q5JZY3 1008 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
SF3B3-209ENST00000567635 CDC37L1Q7L3B6 337 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 USP17L1Q7RTZ2 530 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 AGBL3Q8NEM8 1001 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 TRPM4Q8TD43 1214 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 ABT1Q9ULW3 272 aaKnown RBP8.74□□□□□ -1.01
SF3B3-209ENST00000567635 ZNF804BA4D1E1 1349 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms