RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
CDR2-206ENST00000567406 PI4KAP1Q8N8J0 262 aa19.69■□□□□ 0.74
CDR2-206ENST00000567406 DDX58O95786 925 aaKnown RBP19.68■□□□□ 0.74
CDR2-206ENST00000567406 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
CDR2-206ENST00000567406 TBC1D10BQ4KMP7 808 aaPredicted RBP19.68■□□□□ 0.74
CDR2-206ENST00000567406 ANKIB1Q9P2G1 1089 aa19.68■□□□□ 0.74
CDR2-206ENST00000567406 PGAP2Q9UHJ9 254 aa19.68■□□□□ 0.74
CDR2-206ENST00000567406 TLL2Q9Y6L7 1015 aa19.68■□□□□ 0.74
CDR2-206ENST00000567406 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
CDR2-206ENST00000567406 WTIPA6NIX2 430 aaPredicted RBP19.67■□□□□ 0.74
CDR2-206ENST00000567406 AOC2O75106 756 aa19.67■□□□□ 0.74
CDR2-206ENST00000567406 UFL1O94874 794 aa19.67■□□□□ 0.74
CDR2-206ENST00000567406 CCDC152Q4G0S7 254 aa19.67■□□□□ 0.74
CDR2-206ENST00000567406 KSR2Q6VAB6 950 aa19.67■□□□□ 0.74
CDR2-206ENST00000567406 USP48Q86UV5 1035 aa19.67■□□□□ 0.74
CDR2-206ENST00000567406 EYA3Q99504 573 aa19.67■□□□□ 0.74
CDR2-206ENST00000567406 CWF19L2Q2TBE0 894 aaKnown RBP19.66■□□□□ 0.74
CDR2-206ENST00000567406 TWISTNBQ3B726 338 aaPredicted RBP19.66■□□□□ 0.74
CDR2-206ENST00000567406 ZC3H12CQ9C0D7 883 aaKnown RBP19.66■□□□□ 0.74
CDR2-206ENST00000567406 CDHR2Q9BYE9 1310 aa19.66■□□□□ 0.74
CDR2-206ENST00000567406 HSPA8P11142 646 aaKnown RBP19.65■□□□□ 0.74
CDR2-206ENST00000567406 DPF2Q92785 391 aa19.65■□□□□ 0.74
CDR2-206ENST00000567406 PRDM10Q9NQV6 1147 aa19.65■□□□□ 0.74
CDR2-206ENST00000567406 PODXL2Q9NZ53 605 aa19.65■□□□□ 0.74
CDR2-206ENST00000567406 GGA1Q9UJY5 639 aa19.65■□□□□ 0.74
CDR2-206ENST00000567406 SCN9AQ15858 1988 aa19.64■□□□□ 0.74
CDR2-206ENST00000567406 G3V3G9 751 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
CDR2-206ENST00000567406 DCAF8Q5TAQ9 597 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 CDC37L1Q7L3B6 337 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 SAPCD2Q86UD0 394 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 ANKRD18AQ8IVF6 992 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 ZC3H15Q8WU90 426 aaKnown RBP19.64■□□□□ 0.73
CDR2-206ENST00000567406 STK31Q9BXU1 1019 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 MRS2Q9HD23 443 aa19.64■□□□□ 0.73
CDR2-206ENST00000567406 POLR2AP24928 1970 aaKnown RBP19.64■□□□□ 0.73
CDR2-206ENST00000567406 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
CDR2-206ENST00000567406 ECE1P42892 770 aa19.63■□□□□ 0.73
CDR2-206ENST00000567406 CTSWP56202 376 aa19.63■□□□□ 0.73
CDR2-206ENST00000567406 CCDC27Q2M243 656 aa19.63■□□□□ 0.73
CDR2-206ENST00000567406 TSKSQ9UJT2 592 aa19.63■□□□□ 0.73
CDR2-206ENST00000567406 ASTN2O75129 1339 aaPredicted RBP19.62■□□□□ 0.73
CDR2-206ENST00000567406 TTLL11Q8NHH1 800 aa19.62■□□□□ 0.73
CDR2-206ENST00000567406 GREM2Q9H772 168 aa19.62■□□□□ 0.73
CDR2-206ENST00000567406 NEURL1BA8MQ27 555 aa19.61■□□□□ 0.73
CDR2-206ENST00000567406 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
CDR2-206ENST00000567406 VIL1P09327 827 aaKnown RBP19.61■□□□□ 0.73
CDR2-206ENST00000567406 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
CDR2-206ENST00000567406 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
CDR2-206ENST00000567406 RPS12P25398 132 aaKnown RBP19.6■□□□□ 0.73
CDR2-206ENST00000567406 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
CDR2-206ENST00000567406 KRT26Q7Z3Y9 468 aa19.6■□□□□ 0.73
CDR2-206ENST00000567406 XDHP47989 1333 aa19.59■□□□□ 0.73
CDR2-206ENST00000567406 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
CDR2-206ENST00000567406 KIF4BQ2VIQ3 1234 aa19.59■□□□□ 0.73
CDR2-206ENST00000567406 ZIC5Q96T25 663 aa19.59■□□□□ 0.73
CDR2-206ENST00000567406 SPEF2Q9C093 1822 aa19.58■□□□□ 0.73
CDR2-206ENST00000567406 H7C1W4 665 aa19.58■□□□□ 0.72
CDR2-206ENST00000567406 ANP32CO43423 234 aa19.58■□□□□ 0.72
CDR2-206ENST00000567406 ATP2B4P23634 1241 aa19.58■□□□□ 0.72
CDR2-206ENST00000567406 FLIIQ13045 1269 aa19.58■□□□□ 0.72
CDR2-206ENST00000567406 CDC5LQ99459 802 aaKnown RBP19.58■□□□□ 0.72
CDR2-206ENST00000567406 MINPP1Q9UNW1 487 aa19.58■□□□□ 0.72
CDR2-206ENST00000567406 SCAF8Q9UPN6 1271 aaKnown RBP19.58■□□□□ 0.72
CDR2-206ENST00000567406 IL16Q14005 1332 aa19.57■□□□□ 0.72
CDR2-206ENST00000567406 RSBN1LQ6PCB5 846 aaPredicted RBP19.57■□□□□ 0.72
CDR2-206ENST00000567406 DCPSQ96C86 337 aaKnown RBP19.57■□□□□ 0.72
CDR2-206ENST00000567406 BEGAINQ9BUH8 593 aa19.57■□□□□ 0.72
CDR2-206ENST00000567406 MXD3Q9BW11 206 aa19.57■□□□□ 0.72
CDR2-206ENST00000567406 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
CDR2-206ENST00000567406 GGA3Q9NZ52 723 aa19.57■□□□□ 0.72
CDR2-206ENST00000567406 THSD7BQ9C0I4 1608 aa19.57■□□□□ 0.72
CDR2-206ENST00000567406 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
CDR2-206ENST00000567406 VAMP4O75379 141 aa19.56■□□□□ 0.72
CDR2-206ENST00000567406 MAP2K2P36507 400 aa19.56■□□□□ 0.72
CDR2-206ENST00000567406 HUNKP57058 714 aa19.56■□□□□ 0.72
CDR2-206ENST00000567406 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
CDR2-206ENST00000567406 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
CDR2-206ENST00000567406 GCKRQ14397 625 aa19.56■□□□□ 0.72
CDR2-206ENST00000567406 BSDC1Q9NW68 430 aaPredicted RBP19.56■□□□□ 0.72
CDR2-206ENST00000567406 MYH3P11055 1940 aa19.55■□□□□ 0.72
CDR2-206ENST00000567406 SCARF1Q14162 830 aa19.55■□□□□ 0.72
CDR2-206ENST00000567406 CASP7P55210 303 aa19.54■□□□□ 0.72
CDR2-206ENST00000567406 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
CDR2-206ENST00000567406 TXNRD3Q86VQ6 643 aa19.54■□□□□ 0.72
CDR2-206ENST00000567406 DNAAF4Q8WXU2 420 aa19.54■□□□□ 0.72
CDR2-206ENST00000567406 FBXW7Q969H0 707 aa19.54■□□□□ 0.72
CDR2-206ENST00000567406 HHIPL1Q96JK4 782 aa19.54■□□□□ 0.72
CDR2-206ENST00000567406 GBA2Q9HCG7 927 aaPredicted RBP19.54■□□□□ 0.72
CDR2-206ENST00000567406 USP17L3A6NCW0 530 aa19.53■□□□□ 0.72
CDR2-206ENST00000567406 USP17L4A6NCW7 530 aa19.53■□□□□ 0.72
CDR2-206ENST00000567406 F6X3S4 739 aa19.53■□□□□ 0.72
CDR2-206ENST00000567406 ITGA6P23229 1130 aa19.53■□□□□ 0.72
CDR2-206ENST00000567406 KLRK1P26718 216 aa19.53■□□□□ 0.72
CDR2-206ENST00000567406 CCT4P50991 539 aaKnown RBP19.53■□□□□ 0.72
CDR2-206ENST00000567406 ZNF280AP59817 542 aaPredicted RBP19.53■□□□□ 0.72
CDR2-206ENST00000567406 ANGEL2Q5VTE6 544 aaKnown RBP19.53■□□□□ 0.72
CDR2-206ENST00000567406 USP17L1Q7RTZ2 530 aa19.53■□□□□ 0.72
CDR2-206ENST00000567406 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms