RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 KCNJ4P48050 445 aa18.93■□□□□ 0.62
COMMD4-219ENST00000567399 PRELPP51888 382 aa18.93■□□□□ 0.62
COMMD4-219ENST00000567399 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-219ENST00000567399 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
COMMD4-219ENST00000567399 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
COMMD4-219ENST00000567399 XDHP47989 1333 aa18.93■□□□□ 0.62
COMMD4-219ENST00000567399 FER1L6Q2WGJ9 1857 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 ATP2B4P23634 1241 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 PDE3AQ14432 1141 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 AOC3Q16853 763 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 WASHC4Q2M389 1173 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 NIM1KQ8IY84 436 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 RTFDC1Q9BY42 306 aaPredicted RBP18.92■□□□□ 0.62
COMMD4-219ENST00000567399 ZC3H12CQ9C0D7 883 aaKnown RBP18.92■□□□□ 0.62
COMMD4-219ENST00000567399 VPS33BQ9H267 617 aa18.92■□□□□ 0.62
COMMD4-219ENST00000567399 MVPQ14764 893 aaKnown RBP18.91■□□□□ 0.62
COMMD4-219ENST00000567399 TBC1D16Q8TBP0 767 aa18.91■□□□□ 0.62
COMMD4-219ENST00000567399 DDX19BQ9UMR2 479 aa18.91■□□□□ 0.62
COMMD4-219ENST00000567399 COL4A1P02462 1669 aa18.9■□□□□ 0.62
COMMD4-219ENST00000567399 ZBTB7BO15156 539 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-219ENST00000567399 CHRNDQ07001 517 aa18.9■□□□□ 0.62
COMMD4-219ENST00000567399 PODXL2Q9NZ53 605 aa18.9■□□□□ 0.62
COMMD4-219ENST00000567399 POLLQ9UGP5 575 aa18.9■□□□□ 0.62
COMMD4-219ENST00000567399 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
COMMD4-219ENST00000567399 RRP1P56182 461 aaKnown RBP18.89■□□□□ 0.61
COMMD4-219ENST00000567399 EIF6P56537 245 aaKnown RBP18.89■□□□□ 0.61
COMMD4-219ENST00000567399 HELBQ8NG08 1087 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-219ENST00000567399 KLHDC4Q8TBB5 520 aa18.89■□□□□ 0.61
COMMD4-219ENST00000567399 C1orf115Q9H7X2 142 aa18.89■□□□□ 0.61
COMMD4-219ENST00000567399 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
COMMD4-219ENST00000567399 ZC3H4Q9UPT8 1303 aaKnown RBP18.89■□□□□ 0.61
COMMD4-219ENST00000567399 TAF5LO75529 589 aa18.88■□□□□ 0.61
COMMD4-219ENST00000567399 KIAA2012Q0VF49 1180 aa18.88■□□□□ 0.61
COMMD4-219ENST00000567399 C20orf194Q5TEA3 1177 aa18.88■□□□□ 0.61
COMMD4-219ENST00000567399 GPR101Q96P66 508 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-219ENST00000567399 KDM2BQ8NHM5 1336 aa18.88■□□□□ 0.61
COMMD4-219ENST00000567399 SPEF2Q9C093 1822 aa18.88■□□□□ 0.61
COMMD4-219ENST00000567399 METTL24Q5JXM2 366 aa18.87■□□□□ 0.61
COMMD4-219ENST00000567399 SNED1Q8TER0 1413 aa18.87■□□□□ 0.61
COMMD4-219ENST00000567399 PUS3Q9BZE2 481 aaKnown RBP18.87■□□□□ 0.61
COMMD4-219ENST00000567399 SIL1Q9H173 461 aa18.87■□□□□ 0.61
COMMD4-219ENST00000567399 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-219ENST00000567399 SBF1O95248 1867 aa18.86■□□□□ 0.61
COMMD4-219ENST00000567399 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
COMMD4-219ENST00000567399 ZNF804BA4D1E1 1349 aa18.86■□□□□ 0.61
COMMD4-219ENST00000567399 MROH5Q6ZUA9 1318 aa18.86■□□□□ 0.61
COMMD4-219ENST00000567399 DOK7Q18PE1 504 aa18.86■□□□□ 0.61
COMMD4-219ENST00000567399 ZNF784Q8NCA9 323 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-219ENST00000567399 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
COMMD4-219ENST00000567399 EYA2O00167 538 aa18.85■□□□□ 0.61
COMMD4-219ENST00000567399 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
COMMD4-219ENST00000567399 DBNDD1Q9H9R9 158 aa18.85■□□□□ 0.61
COMMD4-219ENST00000567399 ZNRF3Q9ULT6 936 aa18.85■□□□□ 0.61
COMMD4-219ENST00000567399 GJA3Q9Y6H8 435 aa18.85■□□□□ 0.61
COMMD4-219ENST00000567399 GLTPD2A6NH11 291 aa18.84■□□□□ 0.61
COMMD4-219ENST00000567399 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-219ENST00000567399 PTPN12Q05209 780 aaKnown RBP18.84■□□□□ 0.61
COMMD4-219ENST00000567399 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
COMMD4-219ENST00000567399 RIPOR2Q9Y4F9 1068 aa18.84■□□□□ 0.61
COMMD4-219ENST00000567399 GOLGB1Q14789 3259 aaKnown RBP18.83■□□□□ 0.61
COMMD4-219ENST00000567399 FZD9O00144 591 aa18.83■□□□□ 0.6
COMMD4-219ENST00000567399 ATP8B2P98198 1209 aa18.83■□□□□ 0.6
COMMD4-219ENST00000567399 MTX1Q13505 466 aa18.83■□□□□ 0.6
COMMD4-219ENST00000567399 PNMA6EA0A0J9YXQ4 647 aa18.82■□□□□ 0.6
COMMD4-219ENST00000567399 WTIPA6NIX2 430 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-219ENST00000567399 ECE2O60344 883 aa18.82■□□□□ 0.6
COMMD4-219ENST00000567399 DDNO94850 711 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-219ENST00000567399 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.6
COMMD4-219ENST00000567399 OS9Q13438 667 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-219ENST00000567399 COPRSQ9NQ92 184 aa18.82■□□□□ 0.6
COMMD4-219ENST00000567399 CEP126Q9P2H0 1117 aa18.82■□□□□ 0.6
COMMD4-219ENST00000567399 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
COMMD4-219ENST00000567399 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
COMMD4-219ENST00000567399 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
COMMD4-219ENST00000567399 RAD17O75943 681 aa18.81■□□□□ 0.6
COMMD4-219ENST00000567399 CIAO1O76071 339 aa18.81■□□□□ 0.6
COMMD4-219ENST00000567399 IL15P40933 162 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-219ENST00000567399 TNIP1Q15025 636 aa18.81■□□□□ 0.6
COMMD4-219ENST00000567399 RRAGCQ9HB90 399 aa18.81■□□□□ 0.6
COMMD4-219ENST00000567399 DUOX1Q9NRD9 1551 aa18.81■□□□□ 0.6
COMMD4-219ENST00000567399 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
COMMD4-219ENST00000567399 ZNF541Q9H0D2 1346 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 SNAP23O00161 211 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 PDE8BO95263 885 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 UBE4AQ14139 1066 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 CIAPIN1Q6FI81 312 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 FBXW7Q969H0 707 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 ZBTB40Q9NUA8 1239 aa18.8■□□□□ 0.6
COMMD4-219ENST00000567399 DICER1Q9UPY3 1922 aaKnown RBP18.8■□□□□ 0.6
COMMD4-219ENST00000567399 HMMRO75330 724 aa18.79■□□□□ 0.6
COMMD4-219ENST00000567399 CXCL9Q07325 125 aa18.79■□□□□ 0.6
COMMD4-219ENST00000567399 CEP85Q6P2H3 762 aa18.79■□□□□ 0.6
COMMD4-219ENST00000567399 ZNF804AQ7Z570 1209 aa18.79■□□□□ 0.6
COMMD4-219ENST00000567399 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
COMMD4-219ENST00000567399 RPAP2Q8IXW5 612 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-219ENST00000567399 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-219ENST00000567399 GPC2Q8N158 579 aa18.79■□□□□ 0.6
COMMD4-219ENST00000567399 COA1Q9GZY4 146 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms