RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 GORABQ5T7V8 394 aa13.17□□□□□ -0.3
VPS9D1-206ENST00000567379 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
VPS9D1-206ENST00000567379 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 MROH5Q6ZUA9 1318 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 SGSM2O43147 1006 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 SSFA2P28290 1259 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 NBPF5PQ86XG9 351 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 MPHOSPH8Q99549 860 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 HAUS7Q99871 368 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 ANO2Q9NQ90 1003 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
VPS9D1-206ENST00000567379 RIC1Q4ADV7 1423 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 PLSCR1O15162 318 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 RABEP1Q15276 862 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 CWC27Q6UX04 472 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 RFX7Q2KHR2 1363 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 UTRNP46939 3433 aa13.15□□□□□ -0.3
VPS9D1-206ENST00000567379 APBA3O96018 575 aa13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 IFIT1P09914 478 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 SNX21Q969T3 373 aa13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 XAGE2Q96GT9 111 aa13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 NLRP3Q96P20 1036 aa13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 DNAJC2Q99543 621 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
VPS9D1-206ENST00000567379 RAD50Q92878 1312 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 NPHP1O15259 732 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 PDE8BO95263 885 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 KIF2CQ99661 725 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 SEC31BQ9NQW1 1179 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
VPS9D1-206ENST00000567379 SLC5A1P13866 664 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 ANAPC15P60006 121 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 PUM3Q15397 648 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 LPIN2Q92539 896 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
VPS9D1-206ENST00000567379 ADORA1P30542 326 aa13.11□□□□□ -0.31
VPS9D1-206ENST00000567379 NFIXQ14938 502 aa13.11□□□□□ -0.31
VPS9D1-206ENST00000567379 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-206ENST00000567379 PROM2Q8N271 834 aa13.11□□□□□ -0.31
VPS9D1-206ENST00000567379 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
VPS9D1-206ENST00000567379 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-206ENST00000567379 GOLIM4O00461 696 aa13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 UQCRFS1P1P0C7P4 283 aa13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 CNBD1Q8NA66 436 aa13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 FLAD1Q8NFF5 587 aa13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 HELBQ8NG08 1087 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
VPS9D1-206ENST00000567379 ST18O60284 1047 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 GYS1P13807 737 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 FGFR2P21802 821 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 IL25Q9H293 177 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 SNRKQ9NRH2 765 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
VPS9D1-206ENST00000567379 RGPD3A6NKT7 1758 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 RGPD4Q7Z3J3 1758 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 HSPA4P34932 840 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 ST5P78524 1137 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 CHRNDQ07001 517 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 IL17RAQ96F46 866 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 NDUFB9Q9Y6M9 179 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 CCDC171Q6TFL3 1326 aa13.08□□□□□ -0.32
VPS9D1-206ENST00000567379 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 TAF5LO75529 589 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 TM4SF1P30408 202 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 KCNJ4P48050 445 aa13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-206ENST00000567379 TTF1Q15361 905 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms