RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ANKIB1Q9P2G1 1089 aa18.24■□□□□ 0.51
COMMD4-216ENST00000567023 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-216ENST00000567023 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
COMMD4-216ENST00000567023 PSMD14O00487 310 aa18.23■□□□□ 0.51
COMMD4-216ENST00000567023 ECE2O60344 883 aa18.23■□□□□ 0.51
COMMD4-216ENST00000567023 RPS12P25398 132 aaKnown RBP18.23■□□□□ 0.51
COMMD4-216ENST00000567023 HIRAP54198 1017 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-216ENST00000567023 CST9Q5W186 159 aa18.23■□□□□ 0.51
COMMD4-216ENST00000567023 CCDC85AQ96PX6 553 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-216ENST00000567023 CDC5LQ99459 802 aaKnown RBP18.23■□□□□ 0.51
COMMD4-216ENST00000567023 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-216ENST00000567023 GGA1Q9UJY5 639 aa18.23■□□□□ 0.51
COMMD4-216ENST00000567023 H7C1D1 291 aa18.22■□□□□ 0.51
COMMD4-216ENST00000567023 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
COMMD4-216ENST00000567023 FKBP5Q13451 457 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-216ENST00000567023 GCKRQ14397 625 aa18.22■□□□□ 0.51
COMMD4-216ENST00000567023 PLA2G12BQ9BX93 195 aa18.22■□□□□ 0.51
COMMD4-216ENST00000567023 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-216ENST00000567023 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-216ENST00000567023 TRAF5O00463 557 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 UFL1O94874 794 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 VIL1P09327 827 aaKnown RBP18.21■□□□□ 0.51
COMMD4-216ENST00000567023 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
COMMD4-216ENST00000567023 DOK7Q18PE1 504 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 MICALL2Q8IY33 904 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-216ENST00000567023 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 GREM2Q9H772 168 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 KCNQ5Q9NR82 932 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 XDHP47989 1333 aa18.21■□□□□ 0.51
COMMD4-216ENST00000567023 MYH3P11055 1940 aa18.2■□□□□ 0.5
COMMD4-216ENST00000567023 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
COMMD4-216ENST00000567023 CASP7P55210 303 aa18.2■□□□□ 0.5
COMMD4-216ENST00000567023 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
COMMD4-216ENST00000567023 TRPM4Q8TD43 1214 aa18.2■□□□□ 0.5
COMMD4-216ENST00000567023 ABT1Q9ULW3 272 aaKnown RBP18.2■□□□□ 0.5
COMMD4-216ENST00000567023 SHTN1A0MZ66 631 aa18.19■□□□□ 0.5
COMMD4-216ENST00000567023 CSF1RP07333 972 aa18.19■□□□□ 0.5
COMMD4-216ENST00000567023 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
COMMD4-216ENST00000567023 TRPM7Q96QT4 1865 aa18.19■□□□□ 0.5
COMMD4-216ENST00000567023 MINPP1Q9UNW1 487 aa18.19■□□□□ 0.5
COMMD4-216ENST00000567023 ZNF609O15014 1411 aa18.18■□□□□ 0.5
COMMD4-216ENST00000567023 TLL2Q9Y6L7 1015 aa18.18■□□□□ 0.5
COMMD4-216ENST00000567023 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
COMMD4-216ENST00000567023 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
COMMD4-216ENST00000567023 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
COMMD4-216ENST00000567023 SAMD7Q7Z3H4 446 aa18.17■□□□□ 0.5
COMMD4-216ENST00000567023 PODNQ7Z5L7 613 aa18.17■□□□□ 0.5
COMMD4-216ENST00000567023 GLIS2Q9BZE0 524 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-216ENST00000567023 WBP1LQ9NX94 342 aa18.17■□□□□ 0.5
COMMD4-216ENST00000567023 G3V3G9 751 aa18.16■□□□□ 0.5
COMMD4-216ENST00000567023 DCAF8Q5TAQ9 597 aa18.16■□□□□ 0.5
COMMD4-216ENST00000567023 SAPCD2Q86UD0 394 aa18.16■□□□□ 0.5
COMMD4-216ENST00000567023 HHIPL1Q96JK4 782 aa18.16■□□□□ 0.5
COMMD4-216ENST00000567023 FOXN1O15353 648 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 CELF2O95319 508 aaKnown RBP18.15■□□□□ 0.5
COMMD4-216ENST00000567023 EGFRP00533 1210 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 ITGA6P23229 1130 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 ECE1P42892 770 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 BEND3Q5T5X7 828 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 AGBL3Q8NEM8 1001 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 MED23Q9ULK4 1368 aa18.15■□□□□ 0.5
COMMD4-216ENST00000567023 WTIPA6NIX2 430 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-216ENST00000567023 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
COMMD4-216ENST00000567023 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
COMMD4-216ENST00000567023 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-216ENST00000567023 TBC1D10BQ4KMP7 808 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-216ENST00000567023 RSBN1LQ6PCB5 846 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-216ENST00000567023 GMLQ99445 158 aa18.14■□□□□ 0.49
COMMD4-216ENST00000567023 LEMD3Q9Y2U8 911 aa18.14■□□□□ 0.49
COMMD4-216ENST00000567023 F6X3S4 739 aa18.13■□□□□ 0.49
COMMD4-216ENST00000567023 ZNF280AP59817 542 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-216ENST00000567023 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
COMMD4-216ENST00000567023 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
COMMD4-216ENST00000567023 PRDM10Q9NQV6 1147 aa18.13■□□□□ 0.49
COMMD4-216ENST00000567023 PSME4Q14997 1843 aa18.13■□□□□ 0.49
COMMD4-216ENST00000567023 USP17L3A6NCW0 530 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 USP17L4A6NCW7 530 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 CTCFP49711 727 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-216ENST00000567023 FOXO4P98177 505 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 KIF4BQ2VIQ3 1234 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 CYP4F22Q6NT55 531 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 USP17L1Q7RTZ2 530 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 ANKRD2Q9GZV1 360 aa18.12■□□□□ 0.49
COMMD4-216ENST00000567023 MAP2K2P36507 400 aa18.11■□□□□ 0.49
COMMD4-216ENST00000567023 DCPSQ96C86 337 aaKnown RBP18.11■□□□□ 0.49
COMMD4-216ENST00000567023 COA1Q9GZY4 146 aa18.11■□□□□ 0.49
COMMD4-216ENST00000567023 THSD7BQ9C0I4 1608 aa18.11■□□□□ 0.49
COMMD4-216ENST00000567023 ZNF804BA4D1E1 1349 aa18.1■□□□□ 0.49
COMMD4-216ENST00000567023 ANKRD18BA2A2Z9 1011 aa18.1■□□□□ 0.49
COMMD4-216ENST00000567023 RBM26Q5T8P6 1007 aaKnown RBP18.1■□□□□ 0.49
COMMD4-216ENST00000567023 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
COMMD4-216ENST00000567023 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms