RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SLC34A2O95436 690 aa20.2■□□□□ 0.82
PALB2-205ENST00000567003 RGS19P49795 217 aa20.2■□□□□ 0.82
PALB2-205ENST00000567003 NOGQ13253 232 aa20.2■□□□□ 0.82
PALB2-205ENST00000567003 FAM155AB1AL88 458 aaPredicted RBP20.19■□□□□ 0.82
PALB2-205ENST00000567003 IRS4O14654 1257 aaPredicted RBP20.19■□□□□ 0.82
PALB2-205ENST00000567003 RALBP1Q15311 655 aa20.19■□□□□ 0.82
PALB2-205ENST00000567003 GBA2Q9HCG7 927 aaPredicted RBP20.19■□□□□ 0.82
PALB2-205ENST00000567003 RGMBQ6NW40 437 aa20.18■□□□□ 0.82
PALB2-205ENST00000567003 TBC1D16Q8TBP0 767 aa20.18■□□□□ 0.82
PALB2-205ENST00000567003 SEC31BQ9NQW1 1179 aa20.17■□□□□ 0.82
PALB2-205ENST00000567003 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
PALB2-205ENST00000567003 RPS12P25398 132 aaKnown RBP20.16■□□□□ 0.82
PALB2-205ENST00000567003 KIF23Q02241 960 aaPredicted RBP20.16■□□□□ 0.82
PALB2-205ENST00000567003 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
PALB2-205ENST00000567003 DUSP27Q5VZP5 1158 aa20.16■□□□□ 0.82
PALB2-205ENST00000567003 RUNDC1Q96C34 613 aa20.16■□□□□ 0.82
PALB2-205ENST00000567003 DCPSQ96C86 337 aaKnown RBP20.16■□□□□ 0.82
PALB2-205ENST00000567003 EYA3Q99504 573 aa20.16■□□□□ 0.82
PALB2-205ENST00000567003 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
PALB2-205ENST00000567003 ZNF157P51786 506 aaPredicted RBP20.15■□□□□ 0.82
PALB2-205ENST00000567003 RPS8P62241 208 aaKnown RBP20.15■□□□□ 0.82
PALB2-205ENST00000567003 C2orf69Q8N8R5 385 aa20.15■□□□□ 0.82
PALB2-205ENST00000567003 JARID2Q92833 1246 aaPredicted RBP20.15■□□□□ 0.82
PALB2-205ENST00000567003 CCDC85AQ96PX6 553 aaPredicted RBP20.15■□□□□ 0.82
PALB2-205ENST00000567003 UFL1O94874 794 aa20.14■□□□□ 0.81
PALB2-205ENST00000567003 HOXB7P09629 217 aa20.14■□□□□ 0.81
PALB2-205ENST00000567003 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
PALB2-205ENST00000567003 HYPKQ9NX55 129 aa20.14■□□□□ 0.81
PALB2-205ENST00000567003 MYBBP1AQ9BQG0 1328 aaKnown RBP20.13■□□□□ 0.81
PALB2-205ENST00000567003 MYD88Q99836 296 aa20.13■□□□□ 0.81
PALB2-205ENST00000567003 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
PALB2-205ENST00000567003 PHAXQ9H814 394 aaKnown RBP20.13■□□□□ 0.81
PALB2-205ENST00000567003 AKAP11Q9UKA4 1901 aa20.13■□□□□ 0.81
PALB2-205ENST00000567003 TRPA1O75762 1119 aa20.12■□□□□ 0.81
PALB2-205ENST00000567003 VIL1P09327 827 aaKnown RBP20.12■□□□□ 0.81
PALB2-205ENST00000567003 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
PALB2-205ENST00000567003 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
PALB2-205ENST00000567003 CDCA5Q96FF9 252 aa20.12■□□□□ 0.81
PALB2-205ENST00000567003 RNF186Q9NXI6 227 aa20.12■□□□□ 0.81
PALB2-205ENST00000567003 ANKIB1Q9P2G1 1089 aa20.12■□□□□ 0.81
PALB2-205ENST00000567003 ADAMTS8Q9UP79 889 aa20.12■□□□□ 0.81
PALB2-205ENST00000567003 PDE4DIPQ5VU43 2346 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 PSME4Q14997 1843 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 SLC10A3P09131 477 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
PALB2-205ENST00000567003 SULF1Q8IWU6 871 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 ZBTB38Q8NAP3 1195 aaPredicted RBP20.11■□□□□ 0.81
PALB2-205ENST00000567003 CCDC102AQ96A19 550 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 GGA1Q9UJY5 639 aa20.11■□□□□ 0.81
PALB2-205ENST00000567003 SCAF8Q9UPN6 1271 aaKnown RBP20.11■□□□□ 0.81
PALB2-205ENST00000567003 G3V3G9 751 aa20.1■□□□□ 0.81
PALB2-205ENST00000567003 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
PALB2-205ENST00000567003 SOX10P56693 466 aa20.1■□□□□ 0.81
PALB2-205ENST00000567003 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
PALB2-205ENST00000567003 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
PALB2-205ENST00000567003 SCARF1Q14162 830 aa20.1■□□□□ 0.81
PALB2-205ENST00000567003 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
PALB2-205ENST00000567003 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
PALB2-205ENST00000567003 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
PALB2-205ENST00000567003 SAGE1Q9NXZ1 904 aa20.09■□□□□ 0.81
PALB2-205ENST00000567003 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
PALB2-205ENST00000567003 WTIPA6NIX2 430 aaPredicted RBP20.08■□□□□ 0.81
PALB2-205ENST00000567003 ZNF280AP59817 542 aaPredicted RBP20.08■□□□□ 0.81
PALB2-205ENST00000567003 RASAL3Q86YV0 1011 aa20.08■□□□□ 0.81
PALB2-205ENST00000567003 CSRNP1Q96S65 589 aa20.08■□□□□ 0.81
PALB2-205ENST00000567003 ZNF853P0CG23 659 aa20.07■□□□□ 0.8
PALB2-205ENST00000567003 CCDC152Q4G0S7 254 aa20.07■□□□□ 0.8
PALB2-205ENST00000567003 MOB2Q70IA6 237 aa20.07■□□□□ 0.8
PALB2-205ENST00000567003 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
PALB2-205ENST00000567003 PAPPA2Q9BXP8 1791 aa20.06■□□□□ 0.8
PALB2-205ENST00000567003 ZNF609O15014 1411 aa20.05■□□□□ 0.8
PALB2-205ENST00000567003 PDE8AO60658 829 aa20.05■□□□□ 0.8
PALB2-205ENST00000567003 AGBL3Q8NEM8 1001 aa20.05■□□□□ 0.8
PALB2-205ENST00000567003 GMLQ99445 158 aa20.05■□□□□ 0.8
PALB2-205ENST00000567003 MXD3Q9BW11 206 aa20.05■□□□□ 0.8
PALB2-205ENST00000567003 MYOZ2Q9NPC6 264 aa20.05■□□□□ 0.8
PALB2-205ENST00000567003 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
PALB2-205ENST00000567003 PRAMEF18Q5VWM3 479 aa20.04■□□□□ 0.8
PALB2-205ENST00000567003 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
PALB2-205ENST00000567003 CCDC191Q8NCU4 936 aa20.04■□□□□ 0.8
PALB2-205ENST00000567003 ZNF646O15015 1829 aaPredicted RBP20.04■□□□□ 0.8
PALB2-205ENST00000567003 XDHP47989 1333 aa20.03■□□□□ 0.8
PALB2-205ENST00000567003 USP17L8P0C7I0 530 aa20.03■□□□□ 0.8
PALB2-205ENST00000567003 ANKRD18AQ8IVF6 992 aa20.03■□□□□ 0.8
PALB2-205ENST00000567003 USP17L3A6NCW0 530 aa20.02■□□□□ 0.8
PALB2-205ENST00000567003 USP17L4A6NCW7 530 aa20.02■□□□□ 0.8
PALB2-205ENST00000567003 APAF1O14727 1248 aa20.02■□□□□ 0.8
PALB2-205ENST00000567003 USP17L1Q7RTZ2 530 aa20.02■□□□□ 0.8
PALB2-205ENST00000567003 METTL22Q9BUU2 404 aaPredicted RBP20.02■□□□□ 0.8
PALB2-205ENST00000567003 IFT57Q9NWB7 429 aa20.02■□□□□ 0.8
PALB2-205ENST00000567003 UBE2Q2LH0YL09 131 aa20.01■□□□□ 0.79
PALB2-205ENST00000567003 HSP90B1P14625 803 aaKnown RBP20.01■□□□□ 0.79
PALB2-205ENST00000567003 ATP2B4P23634 1241 aa20.01■□□□□ 0.79
PALB2-205ENST00000567003 NBPF9Q3BBW0 867 aa20.01■□□□□ 0.79
PALB2-205ENST00000567003 CTU1Q7Z7A3 348 aaKnown RBP20.01■□□□□ 0.79
PALB2-205ENST00000567003 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
PALB2-205ENST00000567003 MAP3K2Q9Y2U5 619 aa20.01■□□□□ 0.79
PALB2-205ENST00000567003 MYH3P11055 1940 aa20■□□□□ 0.79
PALB2-205ENST00000567003 CTSWP56202 376 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms