RNA–Protein interactions for RNA: ENST00000566938.5

BBS4-212, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-212ENST00000566938 PPP2R1AP30153 589 aa8.09□□□□□ -1.11
BBS4-212ENST00000566938 PRKAR2BP31323 418 aa8.09□□□□□ -1.11
BBS4-212ENST00000566938 RASSF7Q02833 373 aa8.09□□□□□ -1.11
BBS4-212ENST00000566938 KCNC4Q03721 635 aa8.09□□□□□ -1.11
BBS4-212ENST00000566938 C16orf71Q8IYS4 520 aaPredicted RBP8.09□□□□□ -1.11
BBS4-212ENST00000566938 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
BBS4-212ENST00000566938 USP16Q9Y5T5 823 aa8.09□□□□□ -1.11
BBS4-212ENST00000566938 PCNTO95613 3336 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 SNRPA1P09661 255 aaKnown RBP8.08□□□□□ -1.12
BBS4-212ENST00000566938 SRGNP10124 158 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 VEGFAP15692 232 aaPredicted RBP8.08□□□□□ -1.12
BBS4-212ENST00000566938 COPS2P61201 443 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 STYK1Q6J9G0 422 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 SMC1BQ8NDV3 1235 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 KLRG1Q96E93 195 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 CFAP53Q96M91 514 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 SETDB2Q96T68 719 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 NUDCQ9Y266 331 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 SCN7AQ01118 1682 aa8.08□□□□□ -1.12
BBS4-212ENST00000566938 ACTN4O43707 911 aaKnown RBP8.07□□□□□ -1.12
BBS4-212ENST00000566938 DZIP3Q86Y13 1208 aaKnown RBP8.07□□□□□ -1.12
BBS4-212ENST00000566938 CNKSR1Q969H4 720 aa8.07□□□□□ -1.12
BBS4-212ENST00000566938 MTRQ99707 1265 aa8.07□□□□□ -1.12
BBS4-212ENST00000566938 IL21Q9HBE4 155 aa8.07□□□□□ -1.12
BBS4-212ENST00000566938 TNRC6CQ9HCJ0 1690 aaKnown RBP8.07□□□□□ -1.12
BBS4-212ENST00000566938 PRAMEF22A3QJZ6 481 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 TRIM66O15016 1216 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 C21orf2O43822 256 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
BBS4-212ENST00000566938 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
BBS4-212ENST00000566938 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
BBS4-212ENST00000566938 MCM10Q7L590 875 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 CNBD1Q8NA66 436 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 RTF1Q92541 710 aaKnown RBP8.06□□□□□ -1.12
BBS4-212ENST00000566938 ZNF622Q969S3 477 aaKnown RBP eCLIP8.06□□□□□ -1.12
BBS4-212ENST00000566938 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 ANKRD31Q8N7Z5 1873 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 WDR90Q96KV7 1748 aa8.06□□□□□ -1.12
BBS4-212ENST00000566938 ITGBL1O95965 494 aaPredicted RBP8.05□□□□□ -1.12
BBS4-212ENST00000566938 ST5P78524 1137 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 HTRA3P83110 453 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 TAF7Q15545 349 aaPredicted RBP8.05□□□□□ -1.12
BBS4-212ENST00000566938 AMHR2Q16671 573 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 PRPF40BQ6NWY9 871 aaKnown RBP8.05□□□□□ -1.12
BBS4-212ENST00000566938 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
BBS4-212ENST00000566938 CCDC24Q8N4L8 307 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 PLEKHF1Q96S99 279 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 TAOK3Q9H2K8 898 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 ZNF652Q9Y2D9 606 aa8.05□□□□□ -1.12
BBS4-212ENST00000566938 NPR1P16066 1061 aa8.04□□□□□ -1.12
BBS4-212ENST00000566938 DCTN1Q14203 1278 aa8.04□□□□□ -1.12
BBS4-212ENST00000566938 TPTE2Q6XPS3 522 aa8.04□□□□□ -1.12
BBS4-212ENST00000566938 ZNF330Q9Y3S2 320 aaPredicted RBP8.04□□□□□ -1.12
BBS4-212ENST00000566938 BCORQ6W2J9 1755 aa8.04□□□□□ -1.12
BBS4-212ENST00000566938 FER1L6Q2WGJ9 1857 aa8.04□□□□□ -1.12
BBS4-212ENST00000566938 COL11A2P13942 1736 aaPredicted RBP8.03□□□□□ -1.12
BBS4-212ENST00000566938 ERVV-1B6SEH8 477 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 NR1I2O75469 434 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 CD46P15529 392 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 GCGRP47871 477 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 PIP4K2AP48426 406 aaPredicted RBP8.03□□□□□ -1.12
BBS4-212ENST00000566938 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
BBS4-212ENST00000566938 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 BLOC1S3Q6QNY0 202 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 NBPF5PQ86XG9 351 aaPredicted RBP8.03□□□□□ -1.12
BBS4-212ENST00000566938 PNISRQ8TF01 805 aaKnown RBP8.03□□□□□ -1.12
BBS4-212ENST00000566938 FAM217BQ9NTX9 383 aaPredicted RBP8.03□□□□□ -1.12
BBS4-212ENST00000566938 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
BBS4-212ENST00000566938 SLX4Q8IY92 1834 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 SSTR3P32745 418 aaPredicted RBP8.02□□□□□ -1.13
BBS4-212ENST00000566938 EIF4A1P60842 406 aaKnown RBP8.02□□□□□ -1.13
BBS4-212ENST00000566938 PDE4DQ08499 809 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 FUT2Q10981 343 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 HLFQ16534 295 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 PUS10Q3MIT2 529 aaKnown RBP8.02□□□□□ -1.13
BBS4-212ENST00000566938 CRY2Q49AN0 593 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 CCDC93Q567U6 631 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 GIGYF2Q6Y7W6 1299 aaKnown RBP8.02□□□□□ -1.13
BBS4-212ENST00000566938 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
BBS4-212ENST00000566938 NIP7Q9Y221 180 aaKnown RBP eCLIP8.02□□□□□ -1.13
BBS4-212ENST00000566938 DICER1Q9UPY3 1922 aaKnown RBP8.01□□□□□ -1.13
BBS4-212ENST00000566938 TIAM2Q8IVF5 1701 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 DDNO94850 711 aaPredicted RBP8.01□□□□□ -1.13
BBS4-212ENST00000566938 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
BBS4-212ENST00000566938 TPRNQ4KMQ1 711 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 MIS18AQ9NYP9 233 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 ARFGEF2Q9Y6D5 1785 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 PASKQ96RG2 1323 aa8.01□□□□□ -1.13
BBS4-212ENST00000566938 IBTKQ9P2D0 1353 aaPredicted RBP8□□□□□ -1.13
BBS4-212ENST00000566938 IQCA1LA6NCM1 817 aa8□□□□□ -1.13
BBS4-212ENST00000566938 FZD9O00144 591 aa8□□□□□ -1.13
BBS4-212ENST00000566938 NPHP1O15259 732 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms