RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
CLK3-218ENST00000566926 XDHP47989 1333 aa16.9■□□□□ 0.3
CLK3-218ENST00000566926 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
CLK3-218ENST00000566926 COL4A5P29400 1685 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 POTECB2RU33 542 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 ATP2B4P23634 1241 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 IFIT5Q13325 482 aaKnown RBP16.89■□□□□ 0.29
CLK3-218ENST00000566926 SMC1BQ8NDV3 1235 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 POLLQ9UGP5 575 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
CLK3-218ENST00000566926 G3V3G9 751 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 IPO8O15397 1037 aaKnown RBP16.88■□□□□ 0.29
CLK3-218ENST00000566926 UFL1O94874 794 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 LMOD1P29536 600 aaPredicted RBP16.88■□□□□ 0.29
CLK3-218ENST00000566926 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
CLK3-218ENST00000566926 FOXO4P98177 505 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 TNIP1Q15025 636 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 HACL1Q9UJ83 578 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 NOB1Q9ULX3 412 aaKnown RBP16.88■□□□□ 0.29
CLK3-218ENST00000566926 UTYO14607 1347 aa16.88■□□□□ 0.29
CLK3-218ENST00000566926 HSPA6P17066 643 aa16.87■□□□□ 0.29
CLK3-218ENST00000566926 CIAPIN1Q6FI81 312 aa16.87■□□□□ 0.29
CLK3-218ENST00000566926 LMBR1LQ6UX01 489 aa16.87■□□□□ 0.29
CLK3-218ENST00000566926 ANKRD2Q9GZV1 360 aa16.87■□□□□ 0.29
CLK3-218ENST00000566926 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
CLK3-218ENST00000566926 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
CLK3-218ENST00000566926 RIMBP2O15034 1052 aa16.86■□□□□ 0.29
CLK3-218ENST00000566926 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
CLK3-218ENST00000566926 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
CLK3-218ENST00000566926 PNMA8AQ86V59 439 aaPredicted RBP16.86■□□□□ 0.29
CLK3-218ENST00000566926 TAF1DQ9H5J8 278 aaPredicted RBP16.86■□□□□ 0.29
CLK3-218ENST00000566926 HDAC5Q9UQL6 1122 aa16.86■□□□□ 0.29
CLK3-218ENST00000566926 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
CLK3-218ENST00000566926 EPHX2P34913 555 aa16.85■□□□□ 0.29
CLK3-218ENST00000566926 CXCL9Q07325 125 aa16.85■□□□□ 0.29
CLK3-218ENST00000566926 LEMD3Q9Y2U8 911 aa16.85■□□□□ 0.29
CLK3-218ENST00000566926 PSME4Q14997 1843 aa16.84■□□□□ 0.29
CLK3-218ENST00000566926 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
CLK3-218ENST00000566926 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
CLK3-218ENST00000566926 ECE2O60344 883 aa16.83■□□□□ 0.28
CLK3-218ENST00000566926 RAD17O75943 681 aa16.83■□□□□ 0.28
CLK3-218ENST00000566926 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.28
CLK3-218ENST00000566926 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
CLK3-218ENST00000566926 LDHDQ86WU2 507 aa16.83■□□□□ 0.28
CLK3-218ENST00000566926 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
CLK3-218ENST00000566926 A0A1B0GUL6 1792 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 MED23Q9ULK4 1368 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 KCNJ4P48050 445 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 APLP1P51693 650 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 EAPPQ56P03 285 aaPredicted RBP16.82■□□□□ 0.28
CLK3-218ENST00000566926 LDHAL6AQ6ZMR3 332 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 SCN9AQ15858 1988 aa16.82■□□□□ 0.28
CLK3-218ENST00000566926 YDJCA8MPS7 323 aa16.81■□□□□ 0.28
CLK3-218ENST00000566926 SCNN1DP51172 638 aa16.81■□□□□ 0.28
CLK3-218ENST00000566926 CHRNDQ07001 517 aa16.81■□□□□ 0.28
CLK3-218ENST00000566926 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
CLK3-218ENST00000566926 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
CLK3-218ENST00000566926 GPR101Q96P66 508 aaPredicted RBP16.81■□□□□ 0.28
CLK3-218ENST00000566926 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
CLK3-218ENST00000566926 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
CLK3-218ENST00000566926 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
CLK3-218ENST00000566926 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
CLK3-218ENST00000566926 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
CLK3-218ENST00000566926 MS4A1P11836 297 aa16.8■□□□□ 0.28
CLK3-218ENST00000566926 RPS12P25398 132 aaKnown RBP16.8■□□□□ 0.28
CLK3-218ENST00000566926 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
CLK3-218ENST00000566926 USP50Q70EL3 339 aaPredicted RBP16.8■□□□□ 0.28
CLK3-218ENST00000566926 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
CLK3-218ENST00000566926 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
CLK3-218ENST00000566926 ADARB2Q9NS39 739 aaKnown RBP16.8■□□□□ 0.28
CLK3-218ENST00000566926 GPRC5DQ9NZD1 345 aa16.8■□□□□ 0.28
CLK3-218ENST00000566926 PSMD14O00487 310 aa16.79■□□□□ 0.28
CLK3-218ENST00000566926 BCAR3O75815 825 aa16.79■□□□□ 0.28
CLK3-218ENST00000566926 EPS15P42566 896 aa16.79■□□□□ 0.28
CLK3-218ENST00000566926 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
CLK3-218ENST00000566926 INTS3Q68E01 1043 aaKnown RBP16.79■□□□□ 0.28
CLK3-218ENST00000566926 DPF2Q92785 391 aa16.79■□□□□ 0.28
CLK3-218ENST00000566926 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
CLK3-218ENST00000566926 ADAMTSL1Q8N6G6 1762 aa16.79■□□□□ 0.28
CLK3-218ENST00000566926 H7C1D1 291 aa16.78■□□□□ 0.28
CLK3-218ENST00000566926 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
CLK3-218ENST00000566926 ZNF594Q96JF6 807 aaPredicted RBP16.78■□□□□ 0.28
CLK3-218ENST00000566926 GNAI3P08754 354 aa16.77■□□□□ 0.28
CLK3-218ENST00000566926 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
CLK3-218ENST00000566926 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
CLK3-218ENST00000566926 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
CLK3-218ENST00000566926 PDE3AQ14432 1141 aa16.77■□□□□ 0.28
CLK3-218ENST00000566926 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
CLK3-218ENST00000566926 CNOT7Q9UIV1 285 aaKnown RBP16.77■□□□□ 0.28
CLK3-218ENST00000566926 TRIM27P14373 513 aa16.76■□□□□ 0.27
CLK3-218ENST00000566926 C15orf52Q6ZUT6 534 aaKnown RBP16.76■□□□□ 0.27
CLK3-218ENST00000566926 POLR2AP24928 1970 aaKnown RBP16.76■□□□□ 0.27
CLK3-218ENST00000566926 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms