RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TAF1P21675 1872 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 IL16Q14005 1332 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 CAPN15O75808 1086 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 LBX1P52954 281 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 CYP4F22Q6NT55 531 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 SAPCD2Q86UD0 394 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 GGA1Q9UJY5 639 aa19.28■□□□□ 0.68
RNF40-209ENST00000566703 PI4KAP2A4QPH2 592 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 VIL1P09327 827 aaKnown RBP19.27■□□□□ 0.68
RNF40-209ENST00000566703 HSPA8P11142 646 aaKnown RBP19.27■□□□□ 0.68
RNF40-209ENST00000566703 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 DOK7Q18PE1 504 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 CCDC184Q52MB2 194 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 PAXIP1Q6ZW49 1069 aaPredicted RBP19.27■□□□□ 0.68
RNF40-209ENST00000566703 ANKRD18AQ8IVF6 992 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 PI4KAP1Q8N8J0 262 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 ANKIB1Q9P2G1 1089 aa19.27■□□□□ 0.68
RNF40-209ENST00000566703 G3V3G9 751 aa19.26■□□□□ 0.67
RNF40-209ENST00000566703 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
RNF40-209ENST00000566703 TWISTNBQ3B726 338 aaPredicted RBP19.26■□□□□ 0.67
RNF40-209ENST00000566703 DCAF8Q5TAQ9 597 aa19.26■□□□□ 0.67
RNF40-209ENST00000566703 BEGAINQ9BUH8 593 aa19.26■□□□□ 0.67
RNF40-209ENST00000566703 SHTN1A0MZ66 631 aa19.25■□□□□ 0.67
RNF40-209ENST00000566703 UFL1O94874 794 aa19.25■□□□□ 0.67
RNF40-209ENST00000566703 ATP2B4P23634 1241 aa19.25■□□□□ 0.67
RNF40-209ENST00000566703 SAMD7Q7Z3H4 446 aa19.25■□□□□ 0.67
RNF40-209ENST00000566703 JARID2Q92833 1246 aaPredicted RBP19.25■□□□□ 0.67
RNF40-209ENST00000566703 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
RNF40-209ENST00000566703 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
RNF40-209ENST00000566703 KCNQ5Q9NR82 932 aa19.25■□□□□ 0.67
RNF40-209ENST00000566703 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
RNF40-209ENST00000566703 RTL9Q8NET4 1388 aa19.24■□□□□ 0.67
RNF40-209ENST00000566703 CTSWP56202 376 aa19.24■□□□□ 0.67
RNF40-209ENST00000566703 USP48Q86UV5 1035 aa19.24■□□□□ 0.67
RNF40-209ENST00000566703 TTLL11Q8NHH1 800 aa19.24■□□□□ 0.67
RNF40-209ENST00000566703 XDHP47989 1333 aa19.24■□□□□ 0.67
RNF40-209ENST00000566703 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
RNF40-209ENST00000566703 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
RNF40-209ENST00000566703 TBC1D10BQ4KMP7 808 aaPredicted RBP19.23■□□□□ 0.67
RNF40-209ENST00000566703 AGBL3Q8NEM8 1001 aa19.23■□□□□ 0.67
RNF40-209ENST00000566703 COL4A1P02462 1669 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 H7C1W4 665 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 GRM1Q13255 1194 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 KRT26Q7Z3Y9 468 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 PODNQ7Z5L7 613 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
RNF40-209ENST00000566703 CCDC85AQ96PX6 553 aaPredicted RBP19.22■□□□□ 0.67
RNF40-209ENST00000566703 ZNF408Q9H9D4 720 aa19.22■□□□□ 0.67
RNF40-209ENST00000566703 BSDC1Q9NW68 430 aaPredicted RBP19.22■□□□□ 0.67
RNF40-209ENST00000566703 ZNF609O15014 1411 aa19.21■□□□□ 0.67
RNF40-209ENST00000566703 CA12O43570 354 aa19.21■□□□□ 0.67
RNF40-209ENST00000566703 RBM26Q5T8P6 1007 aaKnown RBP19.21■□□□□ 0.67
RNF40-209ENST00000566703 WDR63Q8IWG1 891 aa19.21■□□□□ 0.67
RNF40-209ENST00000566703 PCNTO95613 3336 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 AOC2O75106 756 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 EGFRP00533 1210 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 ZNF280AP59817 542 aaPredicted RBP19.2■□□□□ 0.66
RNF40-209ENST00000566703 KIF4BQ2VIQ3 1234 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 RSBN1LQ6PCB5 846 aaPredicted RBP19.2■□□□□ 0.66
RNF40-209ENST00000566703 G2E3Q7L622 706 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 PLA2G12BQ9BX93 195 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 MRS2Q9HD23 443 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 MINPP1Q9UNW1 487 aa19.2■□□□□ 0.66
RNF40-209ENST00000566703 THSD7BQ9C0I4 1608 aa19.19■□□□□ 0.66
RNF40-209ENST00000566703 BRPF1P55201 1214 aaPredicted RBP19.19■□□□□ 0.66
RNF40-209ENST00000566703 CWF19L2Q2TBE0 894 aaKnown RBP19.19■□□□□ 0.66
RNF40-209ENST00000566703 C2orf69Q8N8R5 385 aa19.19■□□□□ 0.66
RNF40-209ENST00000566703 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 ANP32CO43423 234 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 FLIIQ13045 1269 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 NOGQ13253 232 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 SULF1Q8IWU6 871 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 GMLQ99445 158 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 GREM2Q9H772 168 aa19.18■□□□□ 0.66
RNF40-209ENST00000566703 GBA2Q9HCG7 927 aaPredicted RBP19.18■□□□□ 0.66
RNF40-209ENST00000566703 VAMP4O75379 141 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 HUNKP57058 714 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 GCKRQ14397 625 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 UBE3BQ7Z3V4 1068 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 LINS1Q8NG48 757 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 MYH16Q9H6N6 1097 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 LEMD3Q9Y2U8 911 aa19.17■□□□□ 0.66
RNF40-209ENST00000566703 CSF1RP07333 972 aa19.16■□□□□ 0.66
RNF40-209ENST00000566703 USP17L8P0C7I0 530 aa19.16■□□□□ 0.66
RNF40-209ENST00000566703 IGHMBP2P38935 993 aaKnown RBP19.16■□□□□ 0.66
RNF40-209ENST00000566703 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
RNF40-209ENST00000566703 DNAAF4Q8WXU2 420 aa19.16■□□□□ 0.66
RNF40-209ENST00000566703 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
RNF40-209ENST00000566703 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
RNF40-209ENST00000566703 MMP14P50281 582 aa19.15■□□□□ 0.66
RNF40-209ENST00000566703 CASP7P55210 303 aa19.15■□□□□ 0.66
RNF40-209ENST00000566703 FKBP5Q13451 457 aaPredicted RBP19.15■□□□□ 0.66
RNF40-209ENST00000566703 RGMBQ6NW40 437 aa19.15■□□□□ 0.66
RNF40-209ENST00000566703 ANKRD2Q9GZV1 360 aa19.15■□□□□ 0.66
RNF40-209ENST00000566703 GGA3Q9NZ52 723 aa19.15■□□□□ 0.66
RNF40-209ENST00000566703 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
RNF40-209ENST00000566703 ADM5C9JUS6 153 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms