RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-214ENST00000566633 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
PDXDC1-214ENST00000566633 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
PDXDC1-214ENST00000566633 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
PDXDC1-214ENST00000566633 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
PDXDC1-214ENST00000566633 PARP10Q53GL7 1025 aa13.03□□□□□ -0.32
PDXDC1-214ENST00000566633 NUP98P52948 1817 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 BRWD3Q6RI45 1802 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 SNAP23O00161 211 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 RAD50Q92878 1312 aa13.02□□□□□ -0.32
PDXDC1-214ENST00000566633 MCTP1Q6DN14 999 aa13.02□□□□□ -0.33
PDXDC1-214ENST00000566633 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
PDXDC1-214ENST00000566633 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
PDXDC1-214ENST00000566633 CNNM1Q9NRU3 951 aa13.02□□□□□ -0.33
PDXDC1-214ENST00000566633 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 A0A1B0GUL7 405 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 CHGBP05060 677 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 GPATCH3Q96I76 525 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 PANK2Q9BZ23 570 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 LMBRD1Q9NUN5 540 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 COL5A3P25940 1745 aaPredicted RBP13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
PDXDC1-214ENST00000566633 ADORA1P30542 326 aa13□□□□□ -0.33
PDXDC1-214ENST00000566633 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
PDXDC1-214ENST00000566633 METTL24Q5JXM2 366 aa13□□□□□ -0.33
PDXDC1-214ENST00000566633 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
PDXDC1-214ENST00000566633 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
PDXDC1-214ENST00000566633 SNX14Q9Y5W7 946 aa13□□□□□ -0.33
PDXDC1-214ENST00000566633 NPHP1O15259 732 aa12.99□□□□□ -0.33
PDXDC1-214ENST00000566633 TAF5LO75529 589 aa12.99□□□□□ -0.33
PDXDC1-214ENST00000566633 KIAA1211Q6ZU35 1233 aa12.99□□□□□ -0.33
PDXDC1-214ENST00000566633 CIAO1O76071 339 aa12.99□□□□□ -0.33
PDXDC1-214ENST00000566633 NFIXQ14938 502 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 NOL8Q76FK4 1167 aaKnown RBP12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 EVI5LQ96CN4 794 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 BRD1O95696 1058 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 RREB1Q92766 1687 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
PDXDC1-214ENST00000566633 WTIPA6NIX2 430 aaPredicted RBP12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 CCDC152Q4G0S7 254 aa12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 TTC14Q96N46 770 aa12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
PDXDC1-214ENST00000566633 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
PDXDC1-214ENST00000566633 GORABQ5T7V8 394 aa12.96□□□□□ -0.33
PDXDC1-214ENST00000566633 SLC51AQ86UW1 340 aa12.96□□□□□ -0.33
PDXDC1-214ENST00000566633 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
PDXDC1-214ENST00000566633 FSD1Q9BTV5 496 aa12.96□□□□□ -0.33
PDXDC1-214ENST00000566633 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
PDXDC1-214ENST00000566633 GYS1P13807 737 aa12.96□□□□□ -0.34
PDXDC1-214ENST00000566633 ATP5JP18859 108 aa12.96□□□□□ -0.34
PDXDC1-214ENST00000566633 PTH1RQ03431 593 aa12.96□□□□□ -0.34
PDXDC1-214ENST00000566633 PI16Q6UXB8 463 aa12.96□□□□□ -0.34
PDXDC1-214ENST00000566633 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.34
PDXDC1-214ENST00000566633 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.34
PDXDC1-214ENST00000566633 CELF1Q92879 486 aaKnown RBP12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 KCNB2Q92953 911 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 LY75O60449 1722 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 GOLIM4O00461 696 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 PDE8BO95263 885 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 SCARF1Q14162 830 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
PDXDC1-214ENST00000566633 PLSCR1O15162 318 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 GPT2Q8TD30 523 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 HIP1O00291 1037 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 AK2P54819 239 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
PDXDC1-214ENST00000566633 AKAP2Q9Y2D5 859 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms