RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ANAPC15P60006 121 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 DAB2P98082 770 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 FGD1P98174 961 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 TCEAL1Q15170 157 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 FOXD4L6Q3SYB3 417 aaPredicted RBP4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 ZNF394Q53GI3 561 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 EGFLAMQ63HQ2 1017 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 FOXD4L3Q6VB84 417 aaPredicted RBP4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 JAZF1Q86VZ6 243 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 PPARGC1BQ86YN6 1023 aaKnown RBP4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 OSBPL2Q9H1P3 480 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 CCDC87Q9NVE4 849 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 PCDHGA11Q9Y5H2 935 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 KHNYNO15037 678 aaKnown RBP4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 GPR182O15218 404 aa4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 ARSJQ5FYB0 599 aaPredicted RBP4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 SCG3Q8WXD2 468 aaKnown RBP4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 AIDAQ96BJ3 306 aa4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 PSMD1Q99460 953 aa4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 FHDC1Q9C0D6 1143 aaPredicted RBP4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 PPME1Q9Y570 386 aa4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 MRPL42Q9Y6G3 142 aaKnown RBP4.66□□□□□ -1.66
HERPUD1-211ENST00000566550 ELOA3CA0A087WX78 387 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 ELOA3DA6NLF2 546 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 C9orf172C9J069 976 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 PAX4O43316 350 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 COBLO75128 1261 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 MAPTP10636 758 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 PLA2G4AP47712 749 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 EIF1AXP47813 144 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 PCBP4P57723 403 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 TNP2Q05952 138 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 ELOA3BQ3SY89 546 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 FCHSD1Q86WN1 690 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 ELOA3Q8NG57 546 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 ARMC5Q96C12 935 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 DMRTB1Q96MA1 342 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 NIFKQ9BYG3 293 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 NIF3L1Q9GZT8 377 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 SAP130Q9H0E3 1048 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 HRH3Q9Y5N1 445 aa4.65□□□□□ -1.67
HERPUD1-211ENST00000566550 DCDC2BA2VCK2 349 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 HYAL3O43820 417 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 CLSTN1O94985 981 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 TATP17735 454 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 CD33P20138 364 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 USP4Q13107 963 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 LAMC2Q13753 1193 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 DSC3Q14574 896 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 TLR1Q15399 786 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 NBPF1Q3BBV0 1214 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 RNF187Q5TA31 235 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 ZNF468Q5VIY5 522 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 USP48Q86UV5 1035 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 KCNB2Q92953 911 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 MRFAP1L1Q96HT8 127 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.64□□□□□ -1.674e-17■■□□□ 12.5
HERPUD1-211ENST00000566550 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 ZNF358Q9NW07 568 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 MARK1Q9P0L2 795 aa4.64□□□□□ -1.67
HERPUD1-211ENST00000566550 A0A1W2PNR3 127 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 FOXO3O43524 673 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 FZD6O60353 706 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 YBX3P16989 372 aaKnown RBP eCLIP4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 IGFBP4P22692 258 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 SOGA3Q5TF21 947 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 C16orf46Q6P387 395 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 ATCAYQ86WG3 371 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 VPS37DQ86XT2 251 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 MCF2L2Q86YR7 1114 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 ZNF654Q8IZM8 581 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 TNS4Q8IZW8 715 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 COL26A1Q96A83 441 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 GMLQ99445 158 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 METTL14Q9HCE5 456 aaKnown RBP4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 KLF15Q9UIH9 416 aa4.63□□□□□ -1.67
HERPUD1-211ENST00000566550 STAU1O95793 577 aaKnown RBP4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 NPR3P17342 541 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 GNA15P30679 374 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 RACK1P63244 317 aaKnown RBP4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 NRG1Q02297 640 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 NEUROD1Q13562 356 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 ALKBH2Q6NS38 261 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 ZNF746Q6NUN9 644 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 FILIP1Q7Z7B0 1213 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 CRELD1Q96HD1 420 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 DDX41Q9UJV9 622 aaKnown RBP4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 SUGT1Q9Y2Z0 365 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 COL4A3BPQ9Y5P4 624 aa4.62□□□□□ -1.67
HERPUD1-211ENST00000566550 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 M0R2N6 131 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 FAM157BP0CG42 384 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 ELNP15502 786 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 RBL2Q08999 1139 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 ENOX2Q16206 610 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 NFE2L2Q16236 605 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 TBCELQ5QJ74 424 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms