RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
CCP110-208ENST00000566523 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
CCP110-208ENST00000566523 GTF3C2Q8WUA4 911 aaPredicted RBP11.72□□□□□ -0.53
CCP110-208ENST00000566523 CARNS1A5YM72 827 aa11.71□□□□□ -0.53
CCP110-208ENST00000566523 MBTPS1Q14703 1052 aa11.71□□□□□ -0.53
CCP110-208ENST00000566523 COL13A1Q5TAT6 717 aaPredicted RBP11.71□□□□□ -0.53
CCP110-208ENST00000566523 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
CCP110-208ENST00000566523 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.53
CCP110-208ENST00000566523 NRG1Q02297 640 aaPredicted RBP11.69□□□□□ -0.54
CCP110-208ENST00000566523 RSPO4Q2I0M5 234 aaPredicted RBP11.69□□□□□ -0.54
CCP110-208ENST00000566523 TTC39BQ5VTQ0 682 aaPredicted RBP11.69□□□□□ -0.54
CCP110-208ENST00000566523 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
CCP110-208ENST00000566523 RBSNQ9H1K0 784 aa11.69□□□□□ -0.54
CCP110-208ENST00000566523 ABI2Q9NYB9 513 aaPredicted RBP11.69□□□□□ -0.54
CCP110-208ENST00000566523 DEAF1O75398 565 aaPredicted RBP11.68□□□□□ -0.54
CCP110-208ENST00000566523 MPSTP25325 297 aa11.68□□□□□ -0.54
CCP110-208ENST00000566523 HYAL2Q12891 473 aa11.68□□□□□ -0.54
CCP110-208ENST00000566523 NOM1Q5C9Z4 860 aaKnown RBP11.68□□□□□ -0.54
CCP110-208ENST00000566523 NKAPLQ5M9Q1 402 aa11.68□□□□□ -0.54
CCP110-208ENST00000566523 EDEM1Q92611 657 aa11.68□□□□□ -0.54
CCP110-208ENST00000566523 KIF4AO95239 1232 aa11.67□□□□□ -0.54
CCP110-208ENST00000566523 ITGB7P26010 798 aa11.67□□□□□ -0.54
CCP110-208ENST00000566523 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
CCP110-208ENST00000566523 ELP3Q9H9T3 547 aa11.67□□□□□ -0.54
CCP110-208ENST00000566523 TMEM63CQ9P1W3 806 aa11.67□□□□□ -0.54
CCP110-208ENST00000566523 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
CCP110-208ENST00000566523 RPLP1P05386 114 aaKnown RBP11.66□□□□□ -0.54
CCP110-208ENST00000566523 NPR3P17342 541 aa11.66□□□□□ -0.54
CCP110-208ENST00000566523 EIF1AXP47813 144 aaKnown RBP11.66□□□□□ -0.54
CCP110-208ENST00000566523 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
CCP110-208ENST00000566523 XKR5Q6UX68 686 aa11.66□□□□□ -0.54
CCP110-208ENST00000566523 TXNRD3Q86VQ6 643 aa11.66□□□□□ -0.54
CCP110-208ENST00000566523 TRIM33Q9UPN9 1127 aa11.66□□□□□ -0.54
CCP110-208ENST00000566523 PDGFAP04085 211 aa11.65□□□□□ -0.54
CCP110-208ENST00000566523 DNM1Q05193 864 aaKnown RBP11.65□□□□□ -0.54
CCP110-208ENST00000566523 IL22RA1Q8N6P7 574 aa11.65□□□□□ -0.54
CCP110-208ENST00000566523 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
CCP110-208ENST00000566523 SEMA6BQ9H3T3 888 aa11.65□□□□□ -0.54
CCP110-208ENST00000566523 MZF1P28698 734 aaPredicted RBP11.64□□□□□ -0.55
CCP110-208ENST00000566523 ATP11AP98196 1134 aa11.64□□□□□ -0.55
CCP110-208ENST00000566523 ZNF438Q7Z4V0 828 aa11.64□□□□□ -0.55
CCP110-208ENST00000566523 USP21Q9UK80 565 aa11.64□□□□□ -0.55
CCP110-208ENST00000566523 DLL1O00548 723 aa11.63□□□□□ -0.55
CCP110-208ENST00000566523 IGF2-ASQ6U949 168 aa11.63□□□□□ -0.55
CCP110-208ENST00000566523 CACTIN-AS1Q8N1I8 211 aa11.63□□□□□ -0.55
CCP110-208ENST00000566523 CNTN3Q9P232 1028 aa11.63□□□□□ -0.55
CCP110-208ENST00000566523 USTQ9Y2C2 406 aa11.63□□□□□ -0.55
CCP110-208ENST00000566523 ALKBH2Q6NS38 261 aa11.62□□□□□ -0.55
CCP110-208ENST00000566523 CEP120Q8N960 986 aa11.62□□□□□ -0.55
CCP110-208ENST00000566523 SPACA7Q96KW9 195 aa11.62□□□□□ -0.55
CCP110-208ENST00000566523 SETDB1Q15047 1291 aa11.61□□□□□ -0.55
CCP110-208ENST00000566523 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
CCP110-208ENST00000566523 SSBP4Q9BWG4 385 aaPredicted RBP11.61□□□□□ -0.55
CCP110-208ENST00000566523 RASSF4Q9H2L5 321 aa11.61□□□□□ -0.55
CCP110-208ENST00000566523 SRA1Q9HD15 236 aaKnown RBP11.61□□□□□ -0.55
CCP110-208ENST00000566523 A6NHS1 94 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 DYRK3O43781 588 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 PCSK2P16519 638 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 ADAMTSL4Q6UY14 1074 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
CCP110-208ENST00000566523 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.6□□□□□ -0.55
CCP110-208ENST00000566523 SMNDC1O75940 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCP110-208ENST00000566523 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCP110-208ENST00000566523 C1orf127Q8N9H9 656 aa11.59□□□□□ -0.55
CCP110-208ENST00000566523 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
CCP110-208ENST00000566523 SALL4Q9UJQ4 1053 aa11.59□□□□□ -0.55
CCP110-208ENST00000566523 FAM13AO94988 1023 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
CCP110-208ENST00000566523 C8orf34Q49A92 452 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 MAP4K3Q8IVH8 894 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 PBX4Q9BYU1 374 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 MUC3BQ9H195 1237 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 KANSL3Q9P2N6 904 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 PPME1Q9Y570 386 aa11.58□□□□□ -0.56
CCP110-208ENST00000566523 NOS3P29474 1203 aa11.57□□□□□ -0.56
CCP110-208ENST00000566523 NCAPG2Q86XI2 1143 aa11.57□□□□□ -0.56
CCP110-208ENST00000566523 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
CCP110-208ENST00000566523 FZD6O60353 706 aa11.56□□□□□ -0.56
CCP110-208ENST00000566523 H2AFB1P0C5Y9 115 aa11.56□□□□□ -0.56
CCP110-208ENST00000566523 H2AFB2P0C5Z0 115 aa11.56□□□□□ -0.56
CCP110-208ENST00000566523 IREB2P48200 963 aaKnown RBP11.56□□□□□ -0.56
CCP110-208ENST00000566523 LACRTQ9GZZ8 138 aa11.56□□□□□ -0.56
CCP110-208ENST00000566523 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
CCP110-208ENST00000566523 CDC27P30260 824 aa11.55□□□□□ -0.56
CCP110-208ENST00000566523 ZNF211Q13398 564 aaPredicted RBP11.55□□□□□ -0.56
CCP110-208ENST00000566523 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
CCP110-208ENST00000566523 LINC01387J3KSC0 135 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 TM4SF5O14894 197 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 ABL1P00519 1130 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 CES1P23141 567 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 TMEM130Q8N3G9 435 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 TTC16Q8NEE8 873 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 TP53INP1Q96A56 240 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
CCP110-208ENST00000566523 ARID3AQ99856 593 aa11.54□□□□□ -0.56
CCP110-208ENST00000566523 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
CCP110-208ENST00000566523 NFKBIEO00221 500 aa11.53□□□□□ -0.56
CCP110-208ENST00000566523 AAMPQ13685 434 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms