RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 STK31Q9BXU1 1019 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 ZC3H12CQ9C0D7 883 aaKnown RBP15.36■□□□□ 0.05
UBR1-206ENST00000566493 DBNDD1Q9H9R9 158 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
UBR1-206ENST00000566493 CST9Q5W186 159 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 TBC1D16Q8TBP0 767 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 DPF2Q92785 391 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 PRDM10Q9NQV6 1147 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 WBP1LQ9NX94 342 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 ANKIB1Q9P2G1 1089 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
UBR1-206ENST00000566493 PSMD14O00487 310 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 ECE2O60344 883 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
UBR1-206ENST00000566493 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 GRM1Q13255 1194 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 DOK7Q18PE1 504 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 CDC37L1Q7L3B6 337 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 MICALL2Q8IY33 904 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
UBR1-206ENST00000566493 TSR2Q969E8 191 aaKnown RBP15.34■□□□□ 0.05
UBR1-206ENST00000566493 CAPNS2Q96L46 248 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
UBR1-206ENST00000566493 SEC31BQ9NQW1 1179 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 PGAP2Q9UHJ9 254 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
UBR1-206ENST00000566493 UFL1O94874 794 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 RPS12P25398 132 aaKnown RBP15.33■□□□□ 0.04
UBR1-206ENST00000566493 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
UBR1-206ENST00000566493 HIRAP54198 1017 aaPredicted RBP15.33■□□□□ 0.04
UBR1-206ENST00000566493 CCDC184Q52MB2 194 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 KSR2Q6VAB6 950 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 TRPM4Q8TD43 1214 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
UBR1-206ENST00000566493 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
UBR1-206ENST00000566493 PI4KAP2A4QPH2 592 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
UBR1-206ENST00000566493 CYP4F22Q6NT55 531 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 PI4KAP1Q8N8J0 262 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 GPR101Q96P66 508 aaPredicted RBP15.32■□□□□ 0.04
UBR1-206ENST00000566493 ZNF408Q9H9D4 720 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 COL4A1P02462 1669 aa15.32■□□□□ 0.04
UBR1-206ENST00000566493 SHTN1A0MZ66 631 aa15.31■□□□□ 0.04
UBR1-206ENST00000566493 LBX1P52954 281 aa15.31■□□□□ 0.04
UBR1-206ENST00000566493 SAMD7Q7Z3H4 446 aa15.31■□□□□ 0.04
UBR1-206ENST00000566493 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
UBR1-206ENST00000566493 MRS2Q9HD23 443 aa15.31■□□□□ 0.04
UBR1-206ENST00000566493 ANP32CO43423 234 aa15.3■□□□□ 0.04
UBR1-206ENST00000566493 IL16Q14005 1332 aa15.3■□□□□ 0.04
UBR1-206ENST00000566493 TBC1D10BQ4KMP7 808 aaPredicted RBP15.3■□□□□ 0.04
UBR1-206ENST00000566493 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
UBR1-206ENST00000566493 USP48Q86UV5 1035 aa15.3■□□□□ 0.04
UBR1-206ENST00000566493 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
UBR1-206ENST00000566493 XDHP47989 1333 aa15.29■□□□□ 0.04
UBR1-206ENST00000566493 IGKV5-2P06315 115 aa15.29■□□□□ 0.04
UBR1-206ENST00000566493 MAP2K2P36507 400 aa15.29■□□□□ 0.04
UBR1-206ENST00000566493 CTSWP56202 376 aa15.29■□□□□ 0.04
UBR1-206ENST00000566493 SAPCD2Q86UD0 394 aa15.29■□□□□ 0.04
UBR1-206ENST00000566493 DCPSQ96C86 337 aaKnown RBP15.29■□□□□ 0.04
UBR1-206ENST00000566493 RTL9Q8NET4 1388 aa15.28■□□□□ 0.04
UBR1-206ENST00000566493 MYH3P11055 1940 aa15.28■□□□□ 0.04
UBR1-206ENST00000566493 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
UBR1-206ENST00000566493 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
UBR1-206ENST00000566493 ATP2B4P23634 1241 aa15.28■□□□□ 0.04
UBR1-206ENST00000566493 HHIPL1Q96JK4 782 aa15.28■□□□□ 0.04
UBR1-206ENST00000566493 NEURL1BA8MQ27 555 aa15.27■□□□□ 0.04
UBR1-206ENST00000566493 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.04
UBR1-206ENST00000566493 G2E3Q7L622 706 aa15.27■□□□□ 0.04
UBR1-206ENST00000566493 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.04
UBR1-206ENST00000566493 TTLL11Q8NHH1 800 aa15.27■□□□□ 0.04
UBR1-206ENST00000566493 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
UBR1-206ENST00000566493 THSD7BQ9C0I4 1608 aa15.27■□□□□ 0.03
UBR1-206ENST00000566493 POLR2AP24928 1970 aaKnown RBP15.26■□□□□ 0.03
UBR1-206ENST00000566493 AOC2O75106 756 aa15.26■□□□□ 0.03
UBR1-206ENST00000566493 KIF4BQ2VIQ3 1234 aa15.26■□□□□ 0.03
UBR1-206ENST00000566493 UBE3BQ7Z3V4 1068 aa15.26■□□□□ 0.03
UBR1-206ENST00000566493 GREM2Q9H772 168 aa15.26■□□□□ 0.03
UBR1-206ENST00000566493 BSDC1Q9NW68 430 aaPredicted RBP15.26■□□□□ 0.03
UBR1-206ENST00000566493 SCN9AQ15858 1988 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
UBR1-206ENST00000566493 H7C1W4 665 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 EGFRP00533 1210 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 IGHMBP2P38935 993 aaKnown RBP15.25■□□□□ 0.03
UBR1-206ENST00000566493 HUNKP57058 714 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 FLIIQ13045 1269 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
UBR1-206ENST00000566493 RSBN1LQ6PCB5 846 aaPredicted RBP15.25■□□□□ 0.03
UBR1-206ENST00000566493 PODNQ7Z5L7 613 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 WDR63Q8IWG1 891 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 SULF1Q8IWU6 871 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 C2orf69Q8N8R5 385 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 AGBL3Q8NEM8 1001 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
UBR1-206ENST00000566493 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms