RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 IFIT5Q13325 482 aaKnown RBP16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 WASHC4Q2M389 1173 aa16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 GPR101Q96P66 508 aaPredicted RBP16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 GGA1Q9UJY5 639 aa16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
CNEP1R1-208ENST00000566482 XDHP47989 1333 aa16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 IPO8O15397 1037 aaKnown RBP16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 C16orf71Q8IYS4 520 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 L3MBTL3Q96JM7 780 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 EYA3Q99504 573 aa16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 MPHOSPH8Q99549 860 aa16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 BICC1Q9H694 974 aaKnown RBP16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
CNEP1R1-208ENST00000566482 RIMBP2O15034 1052 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 TRIM27P14373 513 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 CCDC57Q2TAC2 916 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 GPC2Q8N158 579 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 ZNRF3Q9ULT6 936 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
CNEP1R1-208ENST00000566482 TOMM70O94826 608 aa16.21■□□□□ 0.19
CNEP1R1-208ENST00000566482 ATP2B4P23634 1241 aa16.21■□□□□ 0.19
CNEP1R1-208ENST00000566482 RABL6Q3YEC7 729 aaPredicted RBP16.21■□□□□ 0.19
CNEP1R1-208ENST00000566482 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
CNEP1R1-208ENST00000566482 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.19
CNEP1R1-208ENST00000566482 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
CNEP1R1-208ENST00000566482 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
CNEP1R1-208ENST00000566482 YDJCA8MPS7 323 aa16.2■□□□□ 0.18
CNEP1R1-208ENST00000566482 CXCL9Q07325 125 aa16.2■□□□□ 0.18
CNEP1R1-208ENST00000566482 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
CNEP1R1-208ENST00000566482 ZNF594Q96JF6 807 aaPredicted RBP16.2■□□□□ 0.18
CNEP1R1-208ENST00000566482 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
CNEP1R1-208ENST00000566482 RAD17O75943 681 aa16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 CHRNDQ07001 517 aa16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 RBM46Q8TBY0 533 aaKnown RBP16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 ANKRD2Q9GZV1 360 aa16.19■□□□□ 0.18
CNEP1R1-208ENST00000566482 SCN4AP35499 1836 aa16.18■□□□□ 0.18
CNEP1R1-208ENST00000566482 IQCA1LA6NCM1 817 aa16.18■□□□□ 0.18
CNEP1R1-208ENST00000566482 ECE2O60344 883 aa16.18■□□□□ 0.18
CNEP1R1-208ENST00000566482 CIAPIN1Q6FI81 312 aa16.18■□□□□ 0.18
CNEP1R1-208ENST00000566482 LDHAL6AQ6ZMR3 332 aa16.18■□□□□ 0.18
CNEP1R1-208ENST00000566482 MEIS3Q99687 375 aa16.18■□□□□ 0.18
CNEP1R1-208ENST00000566482 MED23Q9ULK4 1368 aa16.17■□□□□ 0.18
CNEP1R1-208ENST00000566482 HELBQ8NG08 1087 aaPredicted RBP16.17■□□□□ 0.18
CNEP1R1-208ENST00000566482 TAF1DQ9H5J8 278 aaPredicted RBP16.17■□□□□ 0.18
CNEP1R1-208ENST00000566482 CNNM1Q9NRU3 951 aa16.17■□□□□ 0.18
CNEP1R1-208ENST00000566482 HACL1Q9UJ83 578 aa16.17■□□□□ 0.18
CNEP1R1-208ENST00000566482 LEMD3Q9Y2U8 911 aa16.17■□□□□ 0.18
CNEP1R1-208ENST00000566482 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
CNEP1R1-208ENST00000566482 G3V3G9 751 aa16.16■□□□□ 0.18
CNEP1R1-208ENST00000566482 SCNN1DP51172 638 aa16.16■□□□□ 0.18
CNEP1R1-208ENST00000566482 TNIP1Q15025 636 aa16.16■□□□□ 0.18
CNEP1R1-208ENST00000566482 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
CNEP1R1-208ENST00000566482 ZNF804BA4D1E1 1349 aa16.16■□□□□ 0.18
CNEP1R1-208ENST00000566482 TAF5LO75529 589 aa16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 EPHX2P34913 555 aa16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 KCNJ4P48050 445 aa16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 GMPSP49915 693 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 FSTL1Q12841 308 aa16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 TMEM57Q8N5G2 664 aa16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 PUS3Q9BZE2 481 aaKnown RBP16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
CNEP1R1-208ENST00000566482 SNAP23O00161 211 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 PSMD14O00487 310 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 PLIN1O60240 522 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 GNAI3P08754 354 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 KLRK1P26718 216 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 EPS15P42566 896 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 TXNRD3Q86VQ6 643 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 SMC1BQ8NDV3 1235 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
CNEP1R1-208ENST00000566482 SCN9AQ15858 1988 aa16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 RLBP1P12271 317 aa16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 EAPPQ56P03 285 aaPredicted RBP16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 GPRC5DQ9NZD1 345 aa16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 RIPOR2Q9Y4F9 1068 aa16.13■□□□□ 0.17
CNEP1R1-208ENST00000566482 RFX5P48382 616 aaPredicted RBP16.12■□□□□ 0.17
CNEP1R1-208ENST00000566482 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
CNEP1R1-208ENST00000566482 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
CNEP1R1-208ENST00000566482 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
CNEP1R1-208ENST00000566482 VIL1P09327 827 aaKnown RBP16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 HSPA6P17066 643 aa16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 PODNQ7Z5L7 613 aa16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms