RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 H7C1D1 291 aa25.78■■□□□ 1.72
CLN6-207ENST00000566347 UFL1O94874 794 aa25.78■■□□□ 1.72
CLN6-207ENST00000566347 ZC3H15Q8WU90 426 aaKnown RBP25.78■■□□□ 1.72
CLN6-207ENST00000566347 DPF2Q92785 391 aa25.78■■□□□ 1.72
CLN6-207ENST00000566347 MYH16Q9H6N6 1097 aa25.78■■□□□ 1.72
CLN6-207ENST00000566347 CNOT7Q9UIV1 285 aaKnown RBP25.78■■□□□ 1.72
CLN6-207ENST00000566347 RASSF10A6NK89 507 aa25.77■■□□□ 1.72
CLN6-207ENST00000566347 H7C1W4 665 aa25.77■■□□□ 1.72
CLN6-207ENST00000566347 PSMD14O00487 310 aa25.77■■□□□ 1.72
CLN6-207ENST00000566347 TTLL11Q8NHH1 800 aa25.77■■□□□ 1.72
CLN6-207ENST00000566347 DNAAF4Q8WXU2 420 aa25.77■■□□□ 1.72
CLN6-207ENST00000566347 RTL9Q8NET4 1388 aa25.77■■□□□ 1.72
CLN6-207ENST00000566347 RPS12P25398 132 aaKnown RBP25.76■■□□□ 1.71
CLN6-207ENST00000566347 VEGFBP49765 207 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 GCKRQ14397 625 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 DOK7Q18PE1 504 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 DEFB115Q30KQ5 88 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 UBE3BQ7Z3V4 1068 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 PGAP2Q9UHJ9 254 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 ABT1Q9ULW3 272 aaKnown RBP25.76■■□□□ 1.71
CLN6-207ENST00000566347 XDHP47989 1333 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 TRPM7Q96QT4 1865 aa25.76■■□□□ 1.71
CLN6-207ENST00000566347 G3V3G9 751 aa25.75■■□□□ 1.71
CLN6-207ENST00000566347 DCAF8Q5TAQ9 597 aa25.75■■□□□ 1.71
CLN6-207ENST00000566347 MICALL2Q8IY33 904 aa25.75■■□□□ 1.71
CLN6-207ENST00000566347 LINS1Q8NG48 757 aa25.75■■□□□ 1.71
CLN6-207ENST00000566347 GPR101Q96P66 508 aaPredicted RBP25.75■■□□□ 1.71
CLN6-207ENST00000566347 ZBTB12Q9Y330 459 aaPredicted RBP25.75■■□□□ 1.71
CLN6-207ENST00000566347 GREM2Q9H772 168 aa25.74■■□□□ 1.71
CLN6-207ENST00000566347 SPINK5Q9NQ38 1064 aaPredicted RBP25.74■■□□□ 1.71
CLN6-207ENST00000566347 TRAF5O00463 557 aa25.73■■□□□ 1.71
CLN6-207ENST00000566347 ATP2B4P23634 1241 aa25.73■■□□□ 1.71
CLN6-207ENST00000566347 HIRAP54198 1017 aaPredicted RBP25.73■■□□□ 1.71
CLN6-207ENST00000566347 COL13A1Q5TAT6 717 aaPredicted RBP25.73■■□□□ 1.71
CLN6-207ENST00000566347 TRPM4Q8TD43 1214 aa25.73■■□□□ 1.71
CLN6-207ENST00000566347 PLA2G12BQ9BX93 195 aa25.73■■□□□ 1.71
CLN6-207ENST00000566347 BSDC1Q9NW68 430 aaPredicted RBP25.73■■□□□ 1.71
CLN6-207ENST00000566347 FMR1Q06787 632 aaKnown RBP eCLIP25.71■■□□□ 1.71
CLN6-207ENST00000566347 KCNQ5Q9NR82 932 aa25.71■■□□□ 1.71
CLN6-207ENST00000566347 SCN9AQ15858 1988 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 SHTN1A0MZ66 631 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 VIL1P09327 827 aaKnown RBP25.7■■□□□ 1.7
CLN6-207ENST00000566347 CASP7P55210 303 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 CST9Q5W186 159 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 CDC37L1Q7L3B6 337 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 MINPP1Q9UNW1 487 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 SPEF2Q9C093 1822 aa25.7■■□□□ 1.7
CLN6-207ENST00000566347 IGHMBP2P38935 993 aaKnown RBP25.69■■□□□ 1.7
CLN6-207ENST00000566347 GLIS2Q9BZE0 524 aaPredicted RBP25.69■■□□□ 1.7
CLN6-207ENST00000566347 WDR33Q9C0J8 1336 aaKnown RBP25.68■■□□□ 1.7
CLN6-207ENST00000566347 SAMD7Q7Z3H4 446 aa25.68■■□□□ 1.7
CLN6-207ENST00000566347 ZNF609O15014 1411 aa25.67■■□□□ 1.7
CLN6-207ENST00000566347 PODNQ7Z5L7 613 aa25.67■■□□□ 1.7
CLN6-207ENST00000566347 AIDAQ96BJ3 306 aa25.67■■□□□ 1.7
CLN6-207ENST00000566347 TLL2Q9Y6L7 1015 aa25.67■■□□□ 1.7
CLN6-207ENST00000566347 MED23Q9ULK4 1368 aa25.67■■□□□ 1.7
CLN6-207ENST00000566347 PSME4Q14997 1843 aa25.66■■□□□ 1.7
CLN6-207ENST00000566347 CELF2O95319 508 aaKnown RBP25.66■■□□□ 1.7
CLN6-207ENST00000566347 CSF1RP07333 972 aa25.66■■□□□ 1.7
CLN6-207ENST00000566347 ITGA6P23229 1130 aa25.66■■□□□ 1.7
CLN6-207ENST00000566347 ECE1P42892 770 aa25.66■■□□□ 1.7
CLN6-207ENST00000566347 TBC1D10BQ4KMP7 808 aaPredicted RBP25.66■■□□□ 1.7
CLN6-207ENST00000566347 ZNF521Q96K83 1311 aa25.65■■□□□ 1.7
CLN6-207ENST00000566347 CCT4P50991 539 aaKnown RBP25.65■■□□□ 1.7
CLN6-207ENST00000566347 FAM161AQ3B820 660 aa25.65■■□□□ 1.7
CLN6-207ENST00000566347 BEND3Q5T5X7 828 aa25.65■■□□□ 1.7
CLN6-207ENST00000566347 AGBL3Q8NEM8 1001 aa25.65■■□□□ 1.7
CLN6-207ENST00000566347 F6X3S4 739 aa25.64■■□□□ 1.7
CLN6-207ENST00000566347 RSBN1LQ6PCB5 846 aaPredicted RBP25.64■■□□□ 1.7
CLN6-207ENST00000566347 PAXIP1Q6ZW49 1069 aaPredicted RBP25.64■■□□□ 1.7
CLN6-207ENST00000566347 CAPNS2Q96L46 248 aa25.64■■□□□ 1.7
CLN6-207ENST00000566347 MPHOSPH8Q99549 860 aa25.64■■□□□ 1.7
CLN6-207ENST00000566347 ANKRD2Q9GZV1 360 aa25.64■■□□□ 1.7
CLN6-207ENST00000566347 WBP1LQ9NX94 342 aa25.64■■□□□ 1.7
CLN6-207ENST00000566347 LEMD3Q9Y2U8 911 aa25.64■■□□□ 1.7
CLN6-207ENST00000566347 FOXN1O15353 648 aa25.63■■□□□ 1.69
CLN6-207ENST00000566347 MAP2K1Q02750 393 aaPredicted RBP25.63■■□□□ 1.69
CLN6-207ENST00000566347 KIF4BQ2VIQ3 1234 aa25.63■■□□□ 1.69
CLN6-207ENST00000566347 TNS4Q8IZW8 715 aa25.63■■□□□ 1.69
CLN6-207ENST00000566347 USP17L3A6NCW0 530 aa25.62■■□□□ 1.69
CLN6-207ENST00000566347 USP17L4A6NCW7 530 aa25.62■■□□□ 1.69
CLN6-207ENST00000566347 EGFRP00533 1210 aa25.62■■□□□ 1.69
CLN6-207ENST00000566347 RBM26Q5T8P6 1007 aaKnown RBP25.62■■□□□ 1.69
CLN6-207ENST00000566347 USP17L1Q7RTZ2 530 aa25.62■■□□□ 1.69
CLN6-207ENST00000566347 SAPCD2Q86UD0 394 aa25.62■■□□□ 1.69
CLN6-207ENST00000566347 USP48Q86UV5 1035 aa25.62■■□□□ 1.69
CLN6-207ENST00000566347 ANKRD18BA2A2Z9 1011 aa25.61■■□□□ 1.69
CLN6-207ENST00000566347 CTCFP49711 727 aaPredicted RBP25.61■■□□□ 1.69
CLN6-207ENST00000566347 KRT26Q7Z3Y9 468 aa25.61■■□□□ 1.69
CLN6-207ENST00000566347 DCPSQ96C86 337 aaKnown RBP25.61■■□□□ 1.69
CLN6-207ENST00000566347 HHIPL1Q96JK4 782 aa25.61■■□□□ 1.69
CLN6-207ENST00000566347 ZNF408Q9H9D4 720 aa25.61■■□□□ 1.69
CLN6-207ENST00000566347 THSD7BQ9C0I4 1608 aa25.61■■□□□ 1.69
CLN6-207ENST00000566347 ZNF280AP59817 542 aaPredicted RBP25.6■■□□□ 1.69
CLN6-207ENST00000566347 CYP4F22Q6NT55 531 aa25.6■■□□□ 1.69
CLN6-207ENST00000566347 WTIPA6NIX2 430 aaPredicted RBP25.59■■□□□ 1.69
CLN6-207ENST00000566347 GMLQ99445 158 aa25.59■■□□□ 1.69
CLN6-207ENST00000566347 COA1Q9GZY4 146 aa25.59■■□□□ 1.69
CLN6-207ENST00000566347 ZNF804BA4D1E1 1349 aa25.59■■□□□ 1.69
CLN6-207ENST00000566347 POLR2AP24928 1970 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms