RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 STX1AQ16623 288 aa25.39■■□□□ 1.66
SPSB3-208ENST00000566339 KIF20AO95235 890 aa25.39■■□□□ 1.65
SPSB3-208ENST00000566339 CKAP2LQ8IYA6 745 aa25.39■■□□□ 1.65
SPSB3-208ENST00000566339 CGNQ9P2M7 1197 aaKnown RBP25.39■■□□□ 1.65
SPSB3-208ENST00000566339 GOLGA6L19H0YKK7 550 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 H3BQV1 296 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 PFKFB2O60825 505 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 NR1I2O75469 434 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 PDIA6Q15084 440 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 IFFO2Q5TF58 517 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 BRF1Q92994 677 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 METTL22Q9BUU2 404 aaPredicted RBP25.38■■□□□ 1.65
SPSB3-208ENST00000566339 CLIP2Q9UDT6 1046 aa25.38■■□□□ 1.65
SPSB3-208ENST00000566339 NEURL1BA8MQ27 555 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 IGKV5-2P06315 115 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 IQCB1Q15051 598 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 TPRNQ4KMQ1 711 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 ANKRD24Q8TF21 1146 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 ZNF396Q96N95 335 aaPredicted RBP25.37■■□□□ 1.65
SPSB3-208ENST00000566339 TFIP11Q9UBB9 837 aaKnown RBP25.37■■□□□ 1.65
SPSB3-208ENST00000566339 RGS17Q9UGC6 210 aaPredicted RBP25.37■■□□□ 1.65
SPSB3-208ENST00000566339 MYH15Q9Y2K3 1946 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 SH3TC1Q8TE82 1336 aa25.37■■□□□ 1.65
SPSB3-208ENST00000566339 TNNT1P13805 278 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 GCKRQ14397 625 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 MCMDC2Q4G0Z9 681 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 RIC3Q7Z5B4 369 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 ZNF589Q86UQ0 364 aaPredicted RBP25.36■■□□□ 1.65
SPSB3-208ENST00000566339 RGS22Q8NE09 1264 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 TLR7Q9NYK1 1049 aaKnown RBP25.36■■□□□ 1.65
SPSB3-208ENST00000566339 OGFRQ9NZT2 677 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 KIF2AO00139 706 aaPredicted RBP25.36■■□□□ 1.65
SPSB3-208ENST00000566339 RABL6Q3YEC7 729 aaPredicted RBP25.36■■□□□ 1.65
SPSB3-208ENST00000566339 FAM173BQ6P4H8 233 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 AGXT2Q9BYV1 514 aa25.36■■□□□ 1.65
SPSB3-208ENST00000566339 COL18A1P39060 1754 aa25.35■■□□□ 1.65
SPSB3-208ENST00000566339 SPATA31A6Q5VVP1 1343 aa25.35■■□□□ 1.65
SPSB3-208ENST00000566339 NUTM2BA6NNL0 878 aaPredicted RBP25.35■■□□□ 1.65
SPSB3-208ENST00000566339 NUTM2EB1AL46 878 aaPredicted RBP25.35■■□□□ 1.65
SPSB3-208ENST00000566339 NUTM2AQ8IVF1 878 aaPredicted RBP25.35■■□□□ 1.65
SPSB3-208ENST00000566339 TSC1Q92574 1164 aa25.35■■□□□ 1.65
SPSB3-208ENST00000566339 HAUS7Q99871 368 aa25.35■■□□□ 1.65
SPSB3-208ENST00000566339 PALLDQ8WX93 1383 aa25.34■■□□□ 1.65
SPSB3-208ENST00000566339 TNNI3KQ59H18 835 aa25.34■■□□□ 1.65
SPSB3-208ENST00000566339 CCDC112Q8NEF3 446 aa25.34■■□□□ 1.65
SPSB3-208ENST00000566339 DDX54Q8TDD1 881 aaKnown RBP25.34■■□□□ 1.65
SPSB3-208ENST00000566339 DNAJC25Q9H1X3 360 aa25.34■■□□□ 1.65
SPSB3-208ENST00000566339 ANO10Q9NW15 660 aa25.34■■□□□ 1.65
SPSB3-208ENST00000566339 FPGT-TNNI3KV9GXZ4 949 aa25.34■■□□□ 1.65
SPSB3-208ENST00000566339 Q6ZUG5 572 aa25.33■■□□□ 1.65
SPSB3-208ENST00000566339 LRP6O75581 1613 aa25.33■■□□□ 1.65
SPSB3-208ENST00000566339 RFX5P48382 616 aaPredicted RBP25.33■■□□□ 1.65
SPSB3-208ENST00000566339 NCBP1Q09161 790 aaKnown RBP25.33■■□□□ 1.65
SPSB3-208ENST00000566339 FBXL16Q8N461 479 aa25.33■■□□□ 1.65
SPSB3-208ENST00000566339 DSCC1Q9BVC3 393 aa25.33■■□□□ 1.65
SPSB3-208ENST00000566339 HELLSQ9NRZ9 838 aa25.33■■□□□ 1.65
SPSB3-208ENST00000566339 TUBB4AP04350 444 aa25.32■■□□□ 1.64
SPSB3-208ENST00000566339 ADD1P35611 737 aaKnown RBP25.32■■□□□ 1.64
SPSB3-208ENST00000566339 GSDMDP57764 484 aa25.32■■□□□ 1.64
SPSB3-208ENST00000566339 ATP2B3Q16720 1220 aa25.32■■□□□ 1.64
SPSB3-208ENST00000566339 MEX3CQ5U5Q3 659 aaKnown RBP25.32■■□□□ 1.64
SPSB3-208ENST00000566339 CCDC73Q6ZRK6 1079 aa25.32■■□□□ 1.64
SPSB3-208ENST00000566339 DHX32Q7L7V1 743 aaKnown RBP25.32■■□□□ 1.64
SPSB3-208ENST00000566339 LRRC8AQ8IWT6 810 aa25.32■■□□□ 1.64
SPSB3-208ENST00000566339 CHMP3Q9Y3E7 222 aa25.32■■□□□ 1.64
SPSB3-208ENST00000566339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.32■■□□□ 1.64
SPSB3-208ENST00000566339 CACTINQ8WUQ7 758 aaKnown RBP25.31■■□□□ 1.64
SPSB3-208ENST00000566339 JARID2Q92833 1246 aaPredicted RBP25.31■■□□□ 1.64
SPSB3-208ENST00000566339 NAT10Q9H0A0 1025 aaKnown RBP25.31■■□□□ 1.64
SPSB3-208ENST00000566339 GPR108Q9NPR9 543 aa25.31■■□□□ 1.64
SPSB3-208ENST00000566339 ZNF609O15014 1411 aa25.31■■□□□ 1.64
SPSB3-208ENST00000566339 PKD1L3Q7Z443 1732 aa25.31■■□□□ 1.64
SPSB3-208ENST00000566339 JAK2O60674 1132 aa25.31■■□□□ 1.64
SPSB3-208ENST00000566339 TPD52L1Q16890 204 aaPredicted RBP25.31■■□□□ 1.64
SPSB3-208ENST00000566339 IMPACTQ9P2X3 320 aa25.31■■□□□ 1.64
SPSB3-208ENST00000566339 DBNLQ9UJU6 430 aaKnown RBP25.31■■□□□ 1.64
SPSB3-208ENST00000566339 SOS2Q07890 1332 aaPredicted RBP25.31■■□□□ 1.64
SPSB3-208ENST00000566339 HSP90B1P14625 803 aaKnown RBP25.3■■□□□ 1.64
SPSB3-208ENST00000566339 STK3Q13188 491 aa25.3■■□□□ 1.64
SPSB3-208ENST00000566339 KBTBD3Q8NAB2 608 aa25.3■■□□□ 1.64
SPSB3-208ENST00000566339 TAF6LQ9Y6J9 622 aa25.3■■□□□ 1.64
SPSB3-208ENST00000566339 SPEF2Q9C093 1822 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 ZBTB7CA1YPR0 619 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 CBX1P83916 185 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 FAM160A1Q05DH4 1040 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 SCRN1Q12765 414 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 LRMPQ12912 555 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 NSUN7Q8NE18 718 aaKnown RBP25.29■■□□□ 1.64
SPSB3-208ENST00000566339 TCEANC2Q96MN5 208 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 ERBB3P21860 1342 aa25.29■■□□□ 1.64
SPSB3-208ENST00000566339 KDM6AO15550 1401 aaPredicted RBP25.29■■□□□ 1.64
SPSB3-208ENST00000566339 SOCS7O14512 581 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 KINO60870 393 aaKnown RBP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 CYP21A2P08686 494 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 KCNJ6P48051 423 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 PTPN12Q05209 780 aaKnown RBP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 GABPB1Q06547 395 aaPredicted RBP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 CEP135Q66GS9 1140 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 ZNF790Q6PG37 636 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 CCAR1Q8IX12 1150 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms