RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CCDC191Q8NCU4 936 aa21.33■■□□□ 1.01
TSR3-202ENST00000566296 TBC1D16Q8TBP0 767 aa21.33■■□□□ 1.01
TSR3-202ENST00000566296 G3V3G9 751 aa21.32■■□□□ 1
TSR3-202ENST00000566296 DOK7Q18PE1 504 aa21.32■■□□□ 1
TSR3-202ENST00000566296 TBC1D10BQ4KMP7 808 aaPredicted RBP21.32■■□□□ 1
TSR3-202ENST00000566296 DCAF8Q5TAQ9 597 aa21.32■■□□□ 1
TSR3-202ENST00000566296 SAMD7Q7Z3H4 446 aa21.32■■□□□ 1
TSR3-202ENST00000566296 ZC3H12CQ9C0D7 883 aaKnown RBP21.32■■□□□ 1
TSR3-202ENST00000566296 CWC25Q9NXE8 425 aaPredicted RBP21.32■■□□□ 1
TSR3-202ENST00000566296 CA12O43570 354 aa21.31■■□□□ 1
TSR3-202ENST00000566296 UFL1O94874 794 aa21.31■■□□□ 1
TSR3-202ENST00000566296 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
TSR3-202ENST00000566296 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
TSR3-202ENST00000566296 USP48Q86UV5 1035 aa21.31■■□□□ 1
TSR3-202ENST00000566296 PODXL2Q9NZ53 605 aa21.31■■□□□ 1
TSR3-202ENST00000566296 ANKIB1Q9P2G1 1089 aa21.31■■□□□ 1
TSR3-202ENST00000566296 GGA1Q9UJY5 639 aa21.31■■□□□ 1
TSR3-202ENST00000566296 SCN9AQ15858 1988 aa21.3■■□□□ 1
TSR3-202ENST00000566296 PDE8AO60658 829 aa21.3■■□□□ 1
TSR3-202ENST00000566296 KRT26Q7Z3Y9 468 aa21.3■■□□□ 1
TSR3-202ENST00000566296 ABHD8Q96I13 439 aa21.3■■□□□ 1
TSR3-202ENST00000566296 SEC31BQ9NQW1 1179 aa21.3■■□□□ 1
TSR3-202ENST00000566296 RTL9Q8NET4 1388 aa21.3■■□□□ 1
TSR3-202ENST00000566296 POLR2AP24928 1970 aaKnown RBP21.29■■□□□ 1
TSR3-202ENST00000566296 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
TSR3-202ENST00000566296 DCPSQ96C86 337 aaKnown RBP21.29■■□□□ 1
TSR3-202ENST00000566296 METTL22Q9BUU2 404 aaPredicted RBP21.29■■□□□ 1
TSR3-202ENST00000566296 HUNKP57058 714 aa21.28■■□□□ 1
TSR3-202ENST00000566296 KIF4BQ2VIQ3 1234 aa21.28■■□□□ 1
TSR3-202ENST00000566296 RBM26Q5T8P6 1007 aaKnown RBP21.28■■□□□ 1
TSR3-202ENST00000566296 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
TSR3-202ENST00000566296 TSKSQ9UJT2 592 aa21.28■■□□□ 1
TSR3-202ENST00000566296 NOGQ13253 232 aa21.27■■□□□ 1
TSR3-202ENST00000566296 ANKRD18AQ8IVF6 992 aa21.27■■□□□ 1
TSR3-202ENST00000566296 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
TSR3-202ENST00000566296 MYH3P11055 1940 aa21.27■■□□□ 1
TSR3-202ENST00000566296 PSME4Q14997 1843 aa21.27■□□□□ 0.99
TSR3-202ENST00000566296 GBA2Q9HCG7 927 aaPredicted RBP21.26■□□□□ 0.99
TSR3-202ENST00000566296 KCNQ5Q9NR82 932 aa21.26■□□□□ 0.99
TSR3-202ENST00000566296 MAP3K2Q9Y2U5 619 aa21.26■□□□□ 0.99
TSR3-202ENST00000566296 XDHP47989 1333 aa21.26■□□□□ 0.99
TSR3-202ENST00000566296 ADM5C9JUS6 153 aa21.25■□□□□ 0.99
TSR3-202ENST00000566296 ZNF609O15014 1411 aa21.25■□□□□ 0.99
TSR3-202ENST00000566296 EGFRP00533 1210 aa21.25■□□□□ 0.99
TSR3-202ENST00000566296 VIL1P09327 827 aaKnown RBP21.25■□□□□ 0.99
TSR3-202ENST00000566296 SULF1Q8IWU6 871 aa21.25■□□□□ 0.99
TSR3-202ENST00000566296 C2orf69Q8N8R5 385 aa21.25■□□□□ 0.99
TSR3-202ENST00000566296 JARID2Q92833 1246 aaPredicted RBP21.25■□□□□ 0.99
TSR3-202ENST00000566296 CDC5LQ99459 802 aaKnown RBP21.25■□□□□ 0.99
TSR3-202ENST00000566296 GGA3Q9NZ52 723 aa21.25■□□□□ 0.99
TSR3-202ENST00000566296 NEXNQ0ZGT2 675 aa21.24■□□□□ 0.99
TSR3-202ENST00000566296 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
TSR3-202ENST00000566296 ATP2B4P23634 1241 aa21.23■□□□□ 0.99
TSR3-202ENST00000566296 CTSWP56202 376 aa21.23■□□□□ 0.99
TSR3-202ENST00000566296 RSBN1LQ6PCB5 846 aaPredicted RBP21.23■□□□□ 0.99
TSR3-202ENST00000566296 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
TSR3-202ENST00000566296 CASP8AP2Q9UKL3 1982 aa21.23■□□□□ 0.99
TSR3-202ENST00000566296 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
TSR3-202ENST00000566296 RGMBQ6NW40 437 aa21.22■□□□□ 0.99
TSR3-202ENST00000566296 DLK2Q6UY11 383 aa21.22■□□□□ 0.99
TSR3-202ENST00000566296 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
TSR3-202ENST00000566296 AGBL3Q8NEM8 1001 aa21.22■□□□□ 0.99
TSR3-202ENST00000566296 PI4KAP2A4QPH2 592 aa21.21■□□□□ 0.99
TSR3-202ENST00000566296 PI4KAP1Q8N8J0 262 aa21.21■□□□□ 0.99
TSR3-202ENST00000566296 TSR2Q969E8 191 aaKnown RBP21.2■□□□□ 0.98
TSR3-202ENST00000566296 CCDC102AQ96A19 550 aa21.2■□□□□ 0.98
TSR3-202ENST00000566296 CCDC85CA6NKD9 419 aa21.19■□□□□ 0.98
TSR3-202ENST00000566296 IGKV5-2P06315 115 aa21.19■□□□□ 0.98
TSR3-202ENST00000566296 ZNF280AP59817 542 aaPredicted RBP21.19■□□□□ 0.98
TSR3-202ENST00000566296 MED23Q9ULK4 1368 aa21.19■□□□□ 0.98
TSR3-202ENST00000566296 USP17L3A6NCW0 530 aa21.18■□□□□ 0.98
TSR3-202ENST00000566296 USP17L4A6NCW7 530 aa21.18■□□□□ 0.98
TSR3-202ENST00000566296 ZNF157P51786 506 aaPredicted RBP21.18■□□□□ 0.98
TSR3-202ENST00000566296 USP17L1Q7RTZ2 530 aa21.18■□□□□ 0.98
TSR3-202ENST00000566296 PODNQ7Z5L7 613 aa21.18■□□□□ 0.98
TSR3-202ENST00000566296 CDCA5Q96FF9 252 aa21.18■□□□□ 0.98
TSR3-202ENST00000566296 ZIC5Q96T25 663 aa21.18■□□□□ 0.98
TSR3-202ENST00000566296 USP17L8P0C7I0 530 aa21.17■□□□□ 0.98
TSR3-202ENST00000566296 SCARF1Q14162 830 aa21.17■□□□□ 0.98
TSR3-202ENST00000566296 CCDC27Q2M243 656 aa21.17■□□□□ 0.98
TSR3-202ENST00000566296 TWISTNBQ3B726 338 aaPredicted RBP21.17■□□□□ 0.98
TSR3-202ENST00000566296 ANGEL2Q5VTE6 544 aaKnown RBP21.17■□□□□ 0.98
TSR3-202ENST00000566296 TTLL11Q8NHH1 800 aa21.17■□□□□ 0.98
TSR3-202ENST00000566296 GREM2Q9H772 168 aa21.17■□□□□ 0.98
TSR3-202ENST00000566296 BSDC1Q9NW68 430 aaPredicted RBP21.17■□□□□ 0.98
TSR3-202ENST00000566296 ASTN2O75129 1339 aaPredicted RBP21.17■□□□□ 0.98
TSR3-202ENST00000566296 AKAP11Q9UKA4 1901 aa21.17■□□□□ 0.98
TSR3-202ENST00000566296 NEURL1BA8MQ27 555 aa21.16■□□□□ 0.98
TSR3-202ENST00000566296 FAM155AB1AL88 458 aaPredicted RBP21.16■□□□□ 0.98
TSR3-202ENST00000566296 CWF19L2Q2TBE0 894 aaKnown RBP21.16■□□□□ 0.98
TSR3-202ENST00000566296 MCOLN1Q9GZU1 580 aa21.16■□□□□ 0.98
TSR3-202ENST00000566296 MYOZ2Q9NPC6 264 aa21.16■□□□□ 0.98
TSR3-202ENST00000566296 PAPPA2Q9BXP8 1791 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 PITPNM2Q9BZ72 1349 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 IGHMBP2P38935 993 aaKnown RBP21.15■□□□□ 0.98
TSR3-202ENST00000566296 FAM161AQ3B820 660 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 UBE3BQ7Z3V4 1068 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 WWC1Q8IX03 1113 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 SAGE1Q9NXZ1 904 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 MINPP1Q9UNW1 487 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms