RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 GGA1Q9UJY5 639 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 XDHP47989 1333 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 USP44Q9H0E7 712 aa22.77■■□□□ 1.24
TRADD-205ENST00000566247 COL4A5P29400 1685 aa22.77■■□□□ 1.24
TRADD-205ENST00000566247 RIMBP2O15034 1052 aa22.76■■□□□ 1.23
TRADD-205ENST00000566247 VEGFAP15692 232 aaPredicted RBP22.76■■□□□ 1.23
TRADD-205ENST00000566247 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
TRADD-205ENST00000566247 ATF7IPQ6VMQ6 1270 aa22.76■■□□□ 1.23
TRADD-205ENST00000566247 BICC1Q9H694 974 aaKnown RBP22.76■■□□□ 1.23
TRADD-205ENST00000566247 MINPP1Q9UNW1 487 aa22.76■■□□□ 1.23
TRADD-205ENST00000566247 GJA3Q9Y6H8 435 aa22.76■■□□□ 1.23
TRADD-205ENST00000566247 TRIM27P14373 513 aa22.75■■□□□ 1.23
TRADD-205ENST00000566247 ATP2B4P23634 1241 aa22.75■■□□□ 1.23
TRADD-205ENST00000566247 GPR101Q96P66 508 aaPredicted RBP22.75■■□□□ 1.23
TRADD-205ENST00000566247 ZC3H12CQ9C0D7 883 aaKnown RBP22.75■■□□□ 1.23
TRADD-205ENST00000566247 ZNRF3Q9ULT6 936 aa22.75■■□□□ 1.23
TRADD-205ENST00000566247 SPEF2Q9C093 1822 aa22.75■■□□□ 1.23
TRADD-205ENST00000566247 G3V3G9 751 aa22.74■■□□□ 1.23
TRADD-205ENST00000566247 UBTFL1P0CB47 393 aaPredicted RBP22.74■■□□□ 1.23
TRADD-205ENST00000566247 C1QTNF8P60827 252 aa22.74■■□□□ 1.23
TRADD-205ENST00000566247 DCAF8Q5TAQ9 597 aa22.74■■□□□ 1.23
TRADD-205ENST00000566247 GPC2Q8N158 579 aa22.74■■□□□ 1.23
TRADD-205ENST00000566247 CLUAP1Q96AJ1 413 aa22.74■■□□□ 1.23
TRADD-205ENST00000566247 KAZALD1Q96I82 304 aa22.74■■□□□ 1.23
TRADD-205ENST00000566247 ANKRD2Q9GZV1 360 aa22.73■■□□□ 1.23
TRADD-205ENST00000566247 LTBP1Q14766 1721 aa22.72■■□□□ 1.23
TRADD-205ENST00000566247 WDR90Q96KV7 1748 aa22.72■■□□□ 1.23
TRADD-205ENST00000566247 IQCA1LA6NCM1 817 aa22.72■■□□□ 1.23
TRADD-205ENST00000566247 TOMM70O94826 608 aa22.72■■□□□ 1.23
TRADD-205ENST00000566247 RABL6Q3YEC7 729 aaPredicted RBP22.72■■□□□ 1.23
TRADD-205ENST00000566247 INTS3Q68E01 1043 aaKnown RBP22.72■■□□□ 1.23
TRADD-205ENST00000566247 ZNF594Q96JF6 807 aaPredicted RBP22.72■■□□□ 1.23
TRADD-205ENST00000566247 HDAC5Q9UQL6 1122 aa22.72■■□□□ 1.23
TRADD-205ENST00000566247 LDHAL6AQ6ZMR3 332 aa22.71■■□□□ 1.23
TRADD-205ENST00000566247 ANKRD44Q8N8A2 993 aa22.71■■□□□ 1.23
TRADD-205ENST00000566247 L3MBTL3Q96JM7 780 aaPredicted RBP22.71■■□□□ 1.23
TRADD-205ENST00000566247 DBNDD1Q9H9R9 158 aa22.71■■□□□ 1.23
TRADD-205ENST00000566247 CNNM1Q9NRU3 951 aa22.71■■□□□ 1.23
TRADD-205ENST00000566247 TNNQ9UQP3 1299 aa22.71■■□□□ 1.23
TRADD-205ENST00000566247 KCNJ4P48050 445 aa22.7■■□□□ 1.22
TRADD-205ENST00000566247 CHRNDQ07001 517 aa22.7■■□□□ 1.22
TRADD-205ENST00000566247 DOK7Q18PE1 504 aa22.7■■□□□ 1.22
TRADD-205ENST00000566247 FTSJ3Q8IY81 847 aaKnown RBP22.7■■□□□ 1.22
TRADD-205ENST00000566247 POTECB2RU33 542 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 ECE2O60344 883 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 RAD17O75943 681 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 CXCL9Q07325 125 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 TNIP1Q15025 636 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 CIAPIN1Q6FI81 312 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 YTHDC1Q96MU7 727 aaKnown RBP22.69■■□□□ 1.22
TRADD-205ENST00000566247 MEIS3Q99687 375 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 LEMD3Q9Y2U8 911 aa22.69■■□□□ 1.22
TRADD-205ENST00000566247 GNAI3P08754 354 aa22.68■■□□□ 1.22
TRADD-205ENST00000566247 LMOD1P29536 600 aaPredicted RBP22.68■■□□□ 1.22
TRADD-205ENST00000566247 RBM46Q8TBY0 533 aaKnown RBP22.68■■□□□ 1.22
TRADD-205ENST00000566247 HACL1Q9UJ83 578 aa22.68■■□□□ 1.22
TRADD-205ENST00000566247 ZNF804BA4D1E1 1349 aa22.67■■□□□ 1.22
TRADD-205ENST00000566247 YDJCA8MPS7 323 aa22.67■■□□□ 1.22
TRADD-205ENST00000566247 LRRFIP2Q9Y608 721 aaKnown RBP22.67■■□□□ 1.22
TRADD-205ENST00000566247 MED23Q9ULK4 1368 aa22.66■■□□□ 1.22
TRADD-205ENST00000566247 PLIN1O60240 522 aa22.66■■□□□ 1.22
TRADD-205ENST00000566247 TMEM57Q8N5G2 664 aa22.66■■□□□ 1.22
TRADD-205ENST00000566247 HELBQ8NG08 1087 aaPredicted RBP22.66■■□□□ 1.22
TRADD-205ENST00000566247 WTIPA6NIX2 430 aaPredicted RBP22.65■■□□□ 1.22
TRADD-205ENST00000566247 TAF5LO75529 589 aa22.65■■□□□ 1.22
TRADD-205ENST00000566247 DZIP1LQ8IYY4 767 aaKnown RBP22.65■■□□□ 1.22
TRADD-205ENST00000566247 TAF1DQ9H5J8 278 aaPredicted RBP22.65■■□□□ 1.22
TRADD-205ENST00000566247 RCAN3Q9UKA8 241 aa22.65■■□□□ 1.22
TRADD-205ENST00000566247 EPHX2P34913 555 aa22.64■■□□□ 1.21
TRADD-205ENST00000566247 SMC1BQ8NDV3 1235 aa22.64■■□□□ 1.21
TRADD-205ENST00000566247 GMPSP49915 693 aaPredicted RBP22.63■■□□□ 1.21
TRADD-205ENST00000566247 EAPPQ56P03 285 aaPredicted RBP22.63■■□□□ 1.21
TRADD-205ENST00000566247 PUS3Q9BZE2 481 aaKnown RBP22.63■■□□□ 1.21
TRADD-205ENST00000566247 SCN4AP35499 1836 aa22.62■■□□□ 1.21
TRADD-205ENST00000566247 PSMD14O00487 310 aa22.62■■□□□ 1.21
TRADD-205ENST00000566247 SCNN1DP51172 638 aa22.62■■□□□ 1.21
TRADD-205ENST00000566247 ITPRIPQ8IWB1 547 aa22.62■■□□□ 1.21
TRADD-205ENST00000566247 KLHDC4Q8TBB5 520 aa22.62■■□□□ 1.21
TRADD-205ENST00000566247 MROH5Q6ZUA9 1318 aa22.61■■□□□ 1.21
TRADD-205ENST00000566247 FSTL1Q12841 308 aa22.61■■□□□ 1.21
TRADD-205ENST00000566247 PNMA8AQ86V59 439 aaPredicted RBP22.61■■□□□ 1.21
TRADD-205ENST00000566247 COA1Q9GZY4 146 aa22.61■■□□□ 1.21
TRADD-205ENST00000566247 SNAP23O00161 211 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 GNAI2P04899 355 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 MS4A1P11836 297 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 KLRK1P26718 216 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 EPS15P42566 896 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 METTL24Q5JXM2 366 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 PODNQ7Z5L7 613 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 KCNQ5Q9NR82 932 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 GPRC5DQ9NZD1 345 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 CLEC11AQ9Y240 323 aa22.6■■□□□ 1.21
TRADD-205ENST00000566247 RLBP1P12271 317 aa22.59■■□□□ 1.21
TRADD-205ENST00000566247 LRRC24Q50LG9 513 aa22.59■■□□□ 1.21
TRADD-205ENST00000566247 TXNRD3Q86VQ6 643 aa22.59■■□□□ 1.21
TRADD-205ENST00000566247 FBXW7Q969H0 707 aa22.59■■□□□ 1.21
TRADD-205ENST00000566247 ZBTB12Q9Y330 459 aaPredicted RBP22.59■■□□□ 1.21
TRADD-205ENST00000566247 RIPOR2Q9Y4F9 1068 aa22.59■■□□□ 1.21
TRADD-205ENST00000566247 POTEIP0CG38 1075 aa22.58■■□□□ 1.21
TRADD-205ENST00000566247 POTEJP0CG39 1038 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms