RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 TNNI3KQ59H18 835 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 STYK1Q6J9G0 422 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 CASC1Q6TDU7 716 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 FPGT-TNNI3KV9GXZ4 949 aa12.01□□□□□ -0.49
SF3B3-207ENST00000566095 LRP5O75197 1615 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 GLRX3O76003 335 aaKnown RBP12□□□□□ -0.49
SF3B3-207ENST00000566095 PDE8BO95263 885 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 KCNJ4P48050 445 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 TFCP2Q12800 502 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 ATP2B3Q16720 1220 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 CCDC158Q5M9N0 1113 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 LPIN2Q92539 896 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 ZNF594Q96JF6 807 aaPredicted RBP12□□□□□ -0.49
SF3B3-207ENST00000566095 RIPOR2Q9Y4F9 1068 aa12□□□□□ -0.49
SF3B3-207ENST00000566095 SASH1O94885 1247 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 SRGNP10124 158 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
SF3B3-207ENST00000566095 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 C2CD5Q86YS7 1000 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 UPF2Q9HAU5 1272 aaKnown RBP11.99□□□□□ -0.49
SF3B3-207ENST00000566095 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 ECHDC1Q9NTX5 307 aa11.99□□□□□ -0.49
SF3B3-207ENST00000566095 GNL3LQ9NVN8 582 aaKnown RBP11.99□□□□□ -0.49
SF3B3-207ENST00000566095 C10orf71Q711Q0 1435 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 SMARCA5O60264 1052 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-207ENST00000566095 UQCRFS1P1P0C7P4 283 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 PDE1AP54750 535 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 TGFB2P61812 414 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 CAVIN4Q5BKX8 364 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 BCL11AQ9H165 835 aa11.98□□□□□ -0.49
SF3B3-207ENST00000566095 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 ZNF609O15014 1411 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 XDHP47989 1333 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 A0A1B0GUL7 405 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-207ENST00000566095 ZBTB7AO95365 584 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 CHRNDQ07001 517 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 TTC22Q5TAA0 569 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.97□□□□□ -0.49
SF3B3-207ENST00000566095 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 LEMD3Q9Y2U8 911 aa11.97□□□□□ -0.49
SF3B3-207ENST00000566095 HIP1O00291 1037 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 ATP2B4P23634 1241 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 TTC39AQ5SRH9 613 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 VPS37DQ86XT2 251 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 SP8Q8IXZ3 490 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 CCDC24Q8N4L8 307 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.49
SF3B3-207ENST00000566095 ZNF622Q969S3 477 aaKnown RBP eCLIP11.96□□□□□ -0.49
SF3B3-207ENST00000566095 PUS3Q9BZE2 481 aaKnown RBP11.96□□□□□ -0.49
SF3B3-207ENST00000566095 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 CD2APQ9Y5K6 639 aa11.96□□□□□ -0.49
SF3B3-207ENST00000566095 TNRC6CQ9HCJ0 1690 aaKnown RBP11.96□□□□□ -0.5
SF3B3-207ENST00000566095 ATP5JP18859 108 aa11.95□□□□□ -0.5
SF3B3-207ENST00000566095 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
SF3B3-207ENST00000566095 C3orf67Q6ZVT6 689 aa11.95□□□□□ -0.5
SF3B3-207ENST00000566095 SUPT20HQ8NEM7 779 aa11.95□□□□□ -0.5
SF3B3-207ENST00000566095 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-207ENST00000566095 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-207ENST00000566095 CCDC8Q9H0W5 538 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-207ENST00000566095 GGA1Q9UJY5 639 aa11.95□□□□□ -0.5
SF3B3-207ENST00000566095 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-207ENST00000566095 ATP6V0A2Q9Y487 856 aa11.95□□□□□ -0.5
SF3B3-207ENST00000566095 TRIM6-TRIM34B2RNG4 842 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 SEMA3EO15041 775 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 IGSF3O75054 1194 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-207ENST00000566095 TTLL6Q8N841 843 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 VGLL2Q8N8G2 317 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 EVI5LQ96CN4 794 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 DDRGK1Q96HY6 314 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 EYA3Q99504 573 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
SF3B3-207ENST00000566095 ZNF804BA4D1E1 1349 aa11.93□□□□□ -0.5
SF3B3-207ENST00000566095 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-207ENST00000566095 CDC45O75419 566 aa11.93□□□□□ -0.5
SF3B3-207ENST00000566095 FGFR2P21802 821 aa11.93□□□□□ -0.5
SF3B3-207ENST00000566095 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
SF3B3-207ENST00000566095 C16orf71Q8IYS4 520 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-207ENST00000566095 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
SF3B3-207ENST00000566095 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
SF3B3-207ENST00000566095 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 ZBTB22O15209 634 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 TIMM10P62072 90 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms