RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 COL4A5P29400 1685 aa26.39■■□□□ 1.82
SHCBP1-205ENST00000566016 LRRFIP2Q9Y608 721 aaKnown RBP26.39■■□□□ 1.82
SHCBP1-205ENST00000566016 ITPRIPQ8IWB1 547 aa26.38■■□□□ 1.81
SHCBP1-205ENST00000566016 ANKIB1Q9P2G1 1089 aa26.38■■□□□ 1.81
SHCBP1-205ENST00000566016 KIAA2012Q0VF49 1180 aa26.37■■□□□ 1.81
SHCBP1-205ENST00000566016 TAF7LQ5H9L4 462 aa26.37■■□□□ 1.81
SHCBP1-205ENST00000566016 PDE3AQ14432 1141 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 ZNF784Q8NCA9 323 aaPredicted RBP26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 TBC1D16Q8TBP0 767 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 PANK1Q8TE04 598 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 POLLQ9UGP5 575 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 PPIP5K2O43314 1243 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 GNAI2P04899 355 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 MTX1Q13505 466 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 LARGE2Q8N3Y3 721 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 JDP2Q8WYK2 163 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 ANKRD2Q9GZV1 360 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 GGA1Q9UJY5 639 aa26.36■■□□□ 1.81
SHCBP1-205ENST00000566016 LDHAL6AQ6ZMR3 332 aa26.35■■□□□ 1.81
SHCBP1-205ENST00000566016 EYA3Q99504 573 aa26.35■■□□□ 1.81
SHCBP1-205ENST00000566016 ZBTB7BO15156 539 aaPredicted RBP26.34■■□□□ 1.81
SHCBP1-205ENST00000566016 PLIN1O60240 522 aa26.34■■□□□ 1.81
SHCBP1-205ENST00000566016 UFL1O94874 794 aa26.34■■□□□ 1.81
SHCBP1-205ENST00000566016 ATP2B4P23634 1241 aa26.34■■□□□ 1.81
SHCBP1-205ENST00000566016 AOC3Q16853 763 aa26.34■■□□□ 1.81
SHCBP1-205ENST00000566016 ZNF594Q96JF6 807 aaPredicted RBP26.34■■□□□ 1.81
SHCBP1-205ENST00000566016 C6orf229H3BNL8 230 aa26.33■■□□□ 1.81
SHCBP1-205ENST00000566016 FZD9O00144 591 aa26.33■■□□□ 1.81
SHCBP1-205ENST00000566016 MVPQ14764 893 aaKnown RBP26.33■■□□□ 1.81
SHCBP1-205ENST00000566016 WASHC4Q2M389 1173 aa26.33■■□□□ 1.81
SHCBP1-205ENST00000566016 RFX5P48382 616 aaPredicted RBP26.32■■□□□ 1.8
SHCBP1-205ENST00000566016 CHRNDQ07001 517 aa26.32■■□□□ 1.8
SHCBP1-205ENST00000566016 NIM1KQ8IY84 436 aa26.32■■□□□ 1.8
SHCBP1-205ENST00000566016 LEMD3Q9Y2U8 911 aa26.32■■□□□ 1.8
SHCBP1-205ENST00000566016 KDM2BQ8NHM5 1336 aa26.32■■□□□ 1.8
SHCBP1-205ENST00000566016 WDR90Q96KV7 1748 aa26.32■■□□□ 1.8
SHCBP1-205ENST00000566016 GLTPD2A6NH11 291 aa26.31■■□□□ 1.8
SHCBP1-205ENST00000566016 CNNM1Q9NRU3 951 aa26.31■■□□□ 1.8
SHCBP1-205ENST00000566016 DDX19BQ9UMR2 479 aa26.31■■□□□ 1.8
SHCBP1-205ENST00000566016 MED23Q9ULK4 1368 aa26.31■■□□□ 1.8
SHCBP1-205ENST00000566016 PSME4Q14997 1843 aa26.31■■□□□ 1.8
SHCBP1-205ENST00000566016 FBXO3Q9UK99 471 aa26.3■■□□□ 1.8
SHCBP1-205ENST00000566016 PTPN12Q05209 780 aaKnown RBP26.3■■□□□ 1.8
SHCBP1-205ENST00000566016 DPY19L2Q6NUT2 758 aa26.3■■□□□ 1.8
SHCBP1-205ENST00000566016 RIPOR2Q9Y4F9 1068 aa26.3■■□□□ 1.8
SHCBP1-205ENST00000566016 MROH5Q6ZUA9 1318 aa26.29■■□□□ 1.8
SHCBP1-205ENST00000566016 ZC3H12CQ9C0D7 883 aaKnown RBP26.29■■□□□ 1.8
SHCBP1-205ENST00000566016 CHMP4BQ9H444 224 aaKnown RBP26.29■■□□□ 1.8
SHCBP1-205ENST00000566016 GPBP1L1Q9HC44 474 aaPredicted RBP26.28■■□□□ 1.8
SHCBP1-205ENST00000566016 ZNRF3Q9ULT6 936 aa26.28■■□□□ 1.8
SHCBP1-205ENST00000566016 ZNF804BA4D1E1 1349 aa26.28■■□□□ 1.8
SHCBP1-205ENST00000566016 SCN4AP35499 1836 aa26.27■■□□□ 1.8
SHCBP1-205ENST00000566016 PUS3Q9BZE2 481 aaKnown RBP26.27■■□□□ 1.8
SHCBP1-205ENST00000566016 COPRSQ9NQ92 184 aa26.27■■□□□ 1.8
SHCBP1-205ENST00000566016 COG6Q9Y2V7 657 aa26.27■■□□□ 1.8
SHCBP1-205ENST00000566016 SCN9AQ15858 1988 aa26.27■■□□□ 1.8
SHCBP1-205ENST00000566016 SRGAP3O43295 1099 aa26.26■■□□□ 1.79
SHCBP1-205ENST00000566016 RRP1P56182 461 aaKnown RBP26.26■■□□□ 1.79
SHCBP1-205ENST00000566016 KLHDC4Q8TBB5 520 aa26.26■■□□□ 1.79
SHCBP1-205ENST00000566016 ZNF541Q9H0D2 1346 aa26.26■■□□□ 1.79
SHCBP1-205ENST00000566016 EYA2O00167 538 aa26.25■■□□□ 1.79
SHCBP1-205ENST00000566016 CIAO1O76071 339 aa26.25■■□□□ 1.79
SHCBP1-205ENST00000566016 EIF6P56537 245 aaKnown RBP26.25■■□□□ 1.79
SHCBP1-205ENST00000566016 C20orf194Q5TEA3 1177 aa26.25■■□□□ 1.79
SHCBP1-205ENST00000566016 GPR101Q96P66 508 aaPredicted RBP26.25■■□□□ 1.79
SHCBP1-205ENST00000566016 LRRC24Q50LG9 513 aa26.24■■□□□ 1.79
SHCBP1-205ENST00000566016 C15orf52Q6ZUT6 534 aaKnown RBP26.24■■□□□ 1.79
SHCBP1-205ENST00000566016 GPC2Q8N158 579 aa26.24■■□□□ 1.79
SHCBP1-205ENST00000566016 RIMBP2O15034 1052 aa26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 KCNJ4P48050 445 aa26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 VGLL2Q8N8G2 317 aa26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 ZNF526Q8TF50 670 aaPredicted RBP26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 L3MBTL3Q96JM7 780 aaPredicted RBP26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 IRS2Q9Y4H2 1338 aa26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 TAF5LO75529 589 aa26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 HELBQ8NG08 1087 aaPredicted RBP26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 ZBTB40Q9NUA8 1239 aa26.23■■□□□ 1.79
SHCBP1-205ENST00000566016 WTIPA6NIX2 430 aaPredicted RBP26.22■■□□□ 1.79
SHCBP1-205ENST00000566016 ECE2O60344 883 aa26.22■■□□□ 1.79
SHCBP1-205ENST00000566016 UBE4AQ14139 1066 aa26.22■■□□□ 1.79
SHCBP1-205ENST00000566016 ZNF646O15015 1829 aaPredicted RBP26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 PNMA6EA0A0J9YXQ4 647 aa26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 YDJCA8MPS7 323 aa26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 METTL24Q5JXM2 366 aa26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 ATG9AQ7Z3C6 839 aa26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 C1orf115Q9H7X2 142 aa26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 DBNDD1Q9H9R9 158 aa26.21■■□□□ 1.79
SHCBP1-205ENST00000566016 DDNO94850 711 aaPredicted RBP26.2■■□□□ 1.78
SHCBP1-205ENST00000566016 PDE8BO95263 885 aa26.2■■□□□ 1.78
SHCBP1-205ENST00000566016 ATP8B2P98198 1209 aa26.2■■□□□ 1.78
SHCBP1-205ENST00000566016 CXCL9Q07325 125 aa26.2■■□□□ 1.78
SHCBP1-205ENST00000566016 POLA2Q14181 598 aa26.2■■□□□ 1.78
SHCBP1-205ENST00000566016 SSH3Q8TE77 659 aa26.2■■□□□ 1.78
SHCBP1-205ENST00000566016 IL15P40933 162 aaPredicted RBP26.19■■□□□ 1.78
SHCBP1-205ENST00000566016 PODNQ7Z5L7 613 aa26.19■■□□□ 1.78
SHCBP1-205ENST00000566016 COA1Q9GZY4 146 aa26.19■■□□□ 1.78
SHCBP1-205ENST00000566016 NMRK2Q9NPI5 230 aa26.19■■□□□ 1.78
SHCBP1-205ENST00000566016 TNIP1Q15025 636 aa26.18■■□□□ 1.78
SHCBP1-205ENST00000566016 DOK7Q18PE1 504 aa26.18■■□□□ 1.78
SHCBP1-205ENST00000566016 CIAPIN1Q6FI81 312 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms