RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 GPSM2P81274 684 aa15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 WASHC4Q2M389 1173 aa15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 LARGE2Q8N3Y3 721 aa15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 ZC3H12CQ9C0D7 883 aaKnown RBP15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 ZNF277Q9NRM2 450 aaPredicted RBP15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 CNNM1Q9NRU3 951 aa15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 LRRFIP2Q9Y608 721 aaKnown RBP15.72■□□□□ 0.11
SHCBP1-204ENST00000565887 RLBP1P12271 317 aa15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 MTX1Q13505 466 aa15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 MVPQ14764 893 aaKnown RBP15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 TBC1D16Q8TBP0 767 aa15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 TAF1P21675 1872 aa15.71■□□□□ 0.11
SHCBP1-204ENST00000565887 KDM2BQ8NHM5 1336 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 PLIN1O60240 522 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 NIM1KQ8IY84 436 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 UTRNP46939 3433 aa15.7■□□□□ 0.1
SHCBP1-204ENST00000565887 MROH5Q6ZUA9 1318 aa15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 G3V3G9 751 aa15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 UFL1O94874 794 aa15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 EIF6P56537 245 aaKnown RBP15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 CHRNDQ07001 517 aa15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
SHCBP1-204ENST00000565887 FZD9O00144 591 aa15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 KCNJ4P48050 445 aa15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 PRELPP51888 382 aa15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 RIPOR2Q9Y4F9 1068 aa15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 DICER1Q9UPY3 1922 aaKnown RBP15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
SHCBP1-204ENST00000565887 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 SRGAP3O43295 1099 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 CIAO1O76071 339 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 PTPN12Q05209 780 aaKnown RBP15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 AOC3Q16853 763 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 COPRSQ9NQ92 184 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 COG6Q9Y2V7 657 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 ZNF804BA4D1E1 1349 aa15.67■□□□□ 0.1
SHCBP1-204ENST00000565887 EYA2O00167 538 aa15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 RFX5P48382 616 aaPredicted RBP15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 RRP1P56182 461 aaKnown RBP15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 UBE4AQ14139 1066 aa15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 TNIP1Q15025 636 aa15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 C15orf52Q6ZUT6 534 aaKnown RBP15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 GPBP1L1Q9HC44 474 aaPredicted RBP15.66■□□□□ 0.1
SHCBP1-204ENST00000565887 IL15P40933 162 aaPredicted RBP15.65■□□□□ 0.1
SHCBP1-204ENST00000565887 METTL24Q5JXM2 366 aa15.65■□□□□ 0.1
SHCBP1-204ENST00000565887 PODNQ7Z5L7 613 aa15.65■□□□□ 0.1
SHCBP1-204ENST00000565887 RPAP2Q8IXW5 612 aaPredicted RBP15.65■□□□□ 0.1
SHCBP1-204ENST00000565887 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
SHCBP1-204ENST00000565887 ZBTB40Q9NUA8 1239 aa15.65■□□□□ 0.1
SHCBP1-204ENST00000565887 RIMBP2O15034 1052 aa15.64■□□□□ 0.09
SHCBP1-204ENST00000565887 PDE8BO95263 885 aa15.64■□□□□ 0.09
SHCBP1-204ENST00000565887 AAMPQ13685 434 aa15.64■□□□□ 0.09
SHCBP1-204ENST00000565887 GPC2Q8N158 579 aa15.64■□□□□ 0.09
SHCBP1-204ENST00000565887 COA1Q9GZY4 146 aa15.64■□□□□ 0.09
SHCBP1-204ENST00000565887 CEP126Q9P2H0 1117 aa15.64■□□□□ 0.09
SHCBP1-204ENST00000565887 MED23Q9ULK4 1368 aa15.63■□□□□ 0.09
SHCBP1-204ENST00000565887 HMMRO75330 724 aa15.63■□□□□ 0.09
SHCBP1-204ENST00000565887 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.09
SHCBP1-204ENST00000565887 SSH3Q8TE77 659 aa15.63■□□□□ 0.09
SHCBP1-204ENST00000565887 PUS3Q9BZE2 481 aaKnown RBP15.63■□□□□ 0.09
SHCBP1-204ENST00000565887 IQCA1LA6NCM1 817 aa15.62■□□□□ 0.09
SHCBP1-204ENST00000565887 TAF5LO75529 589 aa15.62■□□□□ 0.09
SHCBP1-204ENST00000565887 VEGFAP15692 232 aaPredicted RBP15.62■□□□□ 0.09
SHCBP1-204ENST00000565887 LRRC24Q50LG9 513 aa15.62■□□□□ 0.09
SHCBP1-204ENST00000565887 HELBQ8NG08 1087 aaPredicted RBP15.62■□□□□ 0.09
SHCBP1-204ENST00000565887 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
SHCBP1-204ENST00000565887 COL4A1P02462 1669 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 CXCL9Q07325 125 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 POLA2Q14181 598 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 HSP90AB4PQ58FF6 505 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 CAVIN4Q5BKX8 364 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 C20orf194Q5TEA3 1177 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 CIAPIN1Q6FI81 312 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 ZNF804AQ7Z570 1209 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 L3MBTL3Q96JM7 780 aaPredicted RBP15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 AKAP2Q9Y2D5 859 aa15.61■□□□□ 0.09
SHCBP1-204ENST00000565887 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 PNMA6EA0A0J9YXQ4 647 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 ECE2O60344 883 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 MMP14P50281 582 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 PUM3Q15397 648 aaKnown RBP15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 CEP85Q6P2H3 762 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 ATG9AQ7Z3C6 839 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 LPIN2Q92539 896 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 SIL1Q9H173 461 aa15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 NOP58Q9Y2X3 529 aaKnown RBP15.6■□□□□ 0.09
SHCBP1-204ENST00000565887 SPEF2Q9C093 1822 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms