RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TRIM22Q8IYM9 498 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 ALKBH8Q96BT7 664 aaKnown RBP6.68□□□□□ -1.34
LINC00561-201ENST00000565815 DMRTB1Q96MA1 342 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 ANKIB1Q9P2G1 1089 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 PRG4Q92954 1404 aaPredicted RBP6.68□□□□□ -1.34
LINC00561-201ENST00000565815 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 SPEM2Q0P670 501 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 LAPTM4AQ15012 233 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 NLRP8Q86W28 1048 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 FBXO41Q8TF61 875 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 CSRNP1Q96S65 589 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 PCDHGC4Q9Y5F7 938 aa6.68□□□□□ -1.34
LINC00561-201ENST00000565815 CTSHP09668 335 aa6.67□□□□□ -1.34
LINC00561-201ENST00000565815 TBC1D8BQ0IIM8 1120 aa6.67□□□□□ -1.34
LINC00561-201ENST00000565815 ABI2Q9NYB9 513 aaPredicted RBP6.67□□□□□ -1.34
LINC00561-201ENST00000565815 TOP2BQ02880 1626 aa6.67□□□□□ -1.34
LINC00561-201ENST00000565815 FAM157BP0CG42 384 aa6.67□□□□□ -1.34
LINC00561-201ENST00000565815 PDE3BQ13370 1112 aa6.67□□□□□ -1.34
LINC00561-201ENST00000565815 E9PSI1 815 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 J3QW42 95 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 RARAP10276 462 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 MEI1Q5TIA1 1274 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 KCNH4Q9UQ05 1017 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 ZBTB42B2RXF5 422 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
LINC00561-201ENST00000565815 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 PLB1Q6P1J6 1458 aa6.66□□□□□ -1.34
LINC00561-201ENST00000565815 PHACTR2O75167 634 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 FBXO24O75426 580 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 FGFR3P22607 806 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 USP5P45974 858 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 PLAURQ03405 335 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 NXPE4Q6UWF7 544 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 SENP2Q9HC62 589 aa6.65□□□□□ -1.34
LINC00561-201ENST00000565815 TEX14Q8IWB6 1497 aa6.65□□□□□ -1.35
LINC00561-201ENST00000565815 CNTNAP3BQ96NU0 1288 aa6.65□□□□□ -1.35
LINC00561-201ENST00000565815 CITED4Q96RK1 184 aa6.65□□□□□ -1.35
LINC00561-201ENST00000565815 CNTNAP3Q9BZ76 1288 aa6.65□□□□□ -1.35
LINC00561-201ENST00000565815 MARK1Q9P0L2 795 aa6.65□□□□□ -1.35
LINC00561-201ENST00000565815 NAGPAQ9UK23 515 aa6.65□□□□□ -1.35
LINC00561-201ENST00000565815 PDE12Q6L8Q7 609 aaKnown RBP6.64□□□□□ -1.35
LINC00561-201ENST00000565815 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
LINC00561-201ENST00000565815 PRPF40AO75400 957 aaKnown RBP6.64□□□□□ -1.35
LINC00561-201ENST00000565815 ATP11AP98196 1134 aa6.64□□□□□ -1.35
LINC00561-201ENST00000565815 KRT76Q01546 638 aa6.64□□□□□ -1.35
LINC00561-201ENST00000565815 SNX29Q8TEQ0 813 aa6.64□□□□□ -1.35
LINC00561-201ENST00000565815 ZFYVE28Q9HCC9 887 aa6.64□□□□□ -1.35
LINC00561-201ENST00000565815 IGSF5Q9NSI5 407 aa6.64□□□□□ -1.35
LINC00561-201ENST00000565815 GPC6Q9Y625 555 aaPredicted RBP6.64□□□□□ -1.35
LINC00561-201ENST00000565815 ADGRL1O94910 1474 aa6.64□□□□□ -1.35
LINC00561-201ENST00000565815 CES1P23141 567 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 CCINQ13939 588 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 HIF1AQ16665 826 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 TTC16Q8NEE8 873 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 PCSK2P16519 638 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 ERCC3P19447 782 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 KCNQ4P56696 695 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 NLRP13Q86W25 1043 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 SALL4Q9UJQ4 1053 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
LINC00561-201ENST00000565815 SYT9Q86SS6 491 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 KIFC2Q96AC6 838 aa6.63□□□□□ -1.35
LINC00561-201ENST00000565815 BIVM-ERCC5R4GMW8 1640 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 EGFRP00533 1210 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 DAB2P98082 770 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
LINC00561-201ENST00000565815 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.62□□□□□ -1.35
LINC00561-201ENST00000565815 KIAA0586Q9BVV6 1533 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 HECW2Q9P2P5 1572 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 EPB42P16452 691 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 RANGAP1P46060 587 aaPredicted RBP6.62□□□□□ -1.35
LINC00561-201ENST00000565815 PSMD2Q13200 908 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 DHX32Q7L7V1 743 aaKnown RBP6.62□□□□□ -1.35
LINC00561-201ENST00000565815 PNMA5Q96PV4 448 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 ZKSCAN3Q9BRR0 538 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 TRIM56Q9BRZ2 755 aaKnown RBP6.62□□□□□ -1.35
LINC00561-201ENST00000565815 VTI1BQ9UEU0 232 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 ADCY10Q96PN6 1610 aa6.62□□□□□ -1.35
LINC00561-201ENST00000565815 UHRF1BP1LA0JNW5 1464 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 XPCQ01831 940 aaPredicted RBP6.61□□□□□ -1.35
LINC00561-201ENST00000565815 GRM2Q14416 872 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 FIGNL1Q6PIW4 674 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 ATXN7L1Q9ULK2 861 aaPredicted RBP6.61□□□□□ -1.35
LINC00561-201ENST00000565815 PCDHGB7Q9Y5F8 929 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 RUSC2Q8N2Y8 1516 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 H7C1W4 665 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 GLIS3Q8NEA6 775 aa6.61□□□□□ -1.35
LINC00561-201ENST00000565815 GNA15P30679 374 aa6.6□□□□□ -1.35
LINC00561-201ENST00000565815 TMC4Q7Z404 712 aa6.6□□□□□ -1.35
LINC00561-201ENST00000565815 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
LINC00561-201ENST00000565815 BCO2Q9BYV7 579 aa6.6□□□□□ -1.35
LINC00561-201ENST00000565815 NXF1Q9UBU9 619 aaKnown RBP6.6□□□□□ -1.35
LINC00561-201ENST00000565815 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
LINC00561-201ENST00000565815 SORBS3O60504 671 aa6.6□□□□□ -1.35
LINC00561-201ENST00000565815 GRIA4P48058 902 aa6.6□□□□□ -1.35
LINC00561-201ENST00000565815 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 FCHSD1Q86WN1 690 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms