RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MINPP1Q9UNW1 487 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 AKAP2Q9Y2D5 859 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 RIPOR2Q9Y4F9 1068 aa9.61□□□□□ -0.87
CDH1-208ENST00000565810 N4BP2Q86UW6 1770 aaPredicted RBP9.6□□□□□ -0.87
CDH1-208ENST00000565810 KCNJ4P48050 445 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 CHRNDQ07001 517 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 PRPF40BQ6NWY9 871 aaKnown RBP9.6□□□□□ -0.87
CDH1-208ENST00000565810 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
CDH1-208ENST00000565810 RHPN1Q8TCX5 695 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 PUS3Q9BZE2 481 aaKnown RBP9.6□□□□□ -0.87
CDH1-208ENST00000565810 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 ANKIB1Q9P2G1 1089 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 ATP6V0A2Q9Y487 856 aa9.6□□□□□ -0.87
CDH1-208ENST00000565810 SASH1O94885 1247 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 PDE8BO95263 885 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 KCNA3P22001 575 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 TFCP2Q12800 502 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 ATG9AQ7Z3C6 839 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 SYT17Q9BSW7 474 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
CDH1-208ENST00000565810 NRXN2Q9P2S2 1712 aa9.59□□□□□ -0.87
CDH1-208ENST00000565810 KDM2BQ8NHM5 1336 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 IFIT2P09913 472 aaKnown RBP9.58□□□□□ -0.88
CDH1-208ENST00000565810 IFIT1P09914 478 aaKnown RBP9.58□□□□□ -0.88
CDH1-208ENST00000565810 ATP2B4P23634 1241 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 NUCB1Q02818 461 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 UBE4AQ14139 1066 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 PUM3Q15397 648 aaKnown RBP9.58□□□□□ -0.88
CDH1-208ENST00000565810 CHD1LQ86WJ1 897 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 NLGN2Q8NFZ4 835 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 HELBQ8NG08 1087 aaPredicted RBP9.58□□□□□ -0.88
CDH1-208ENST00000565810 IL1RAPL2Q9NP60 686 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 GPR108Q9NPR9 543 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
CDH1-208ENST00000565810 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 BCS1LQ9Y276 419 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 LEMD3Q9Y2U8 911 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
CDH1-208ENST00000565810 XDHP47989 1333 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 C21orf2O43822 256 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
CDH1-208ENST00000565810 TAF5LO75529 589 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 SLC5A1P13866 664 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 ATP2B3Q16720 1220 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 TNNI3KQ59H18 835 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 GORABQ5T7V8 394 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 DPP8Q6V1X1 898 aaPredicted RBP9.57□□□□□ -0.88
CDH1-208ENST00000565810 AACSQ86V21 672 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 RTKN2Q8IZC4 609 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 MPNDQ8N594 471 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 LPIN2Q92539 896 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 NEUROD6Q96NK8 337 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 LNPKQ9C0E8 428 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 PODXL2Q9NZ53 605 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 FPGT-TNNI3KV9GXZ4 949 aa9.57□□□□□ -0.88
CDH1-208ENST00000565810 A0A1B0GUL7 405 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 UFL1O94874 794 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 GPSM2P81274 684 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 VPS37DQ86XT2 251 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 VGLL2Q8N8G2 317 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 SUPT20HQ8NEM7 779 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 C7orf43Q8WVR3 580 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 GPATCH3Q96I76 525 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 EYA3Q99504 573 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 CCDC8Q9H0W5 538 aaPredicted RBP9.56□□□□□ -0.88
CDH1-208ENST00000565810 ZNF804BA4D1E1 1349 aa9.56□□□□□ -0.88
CDH1-208ENST00000565810 TIMM10P62072 90 aa9.55□□□□□ -0.88
CDH1-208ENST00000565810 CAVIN4Q5BKX8 364 aa9.55□□□□□ -0.88
CDH1-208ENST00000565810 CCDC158Q5M9N0 1113 aa9.55□□□□□ -0.88
CDH1-208ENST00000565810 PELP1Q8IZL8 1130 aaKnown RBP9.55□□□□□ -0.88
CDH1-208ENST00000565810 TBC1D16Q8TBP0 767 aa9.55□□□□□ -0.88
CDH1-208ENST00000565810 EAF2Q96CJ1 260 aaPredicted RBP9.55□□□□□ -0.88
CDH1-208ENST00000565810 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
CDH1-208ENST00000565810 DDX60Q8IY21 1712 aaKnown RBP9.55□□□□□ -0.88
CDH1-208ENST00000565810 TNRC6CQ9HCJ0 1690 aaKnown RBP9.55□□□□□ -0.88
CDH1-208ENST00000565810 G3V3G9 751 aa9.54□□□□□ -0.88
CDH1-208ENST00000565810 FGFR2P21802 821 aa9.54□□□□□ -0.88
CDH1-208ENST00000565810 DCAF8Q5TAQ9 597 aa9.54□□□□□ -0.88
CDH1-208ENST00000565810 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
CDH1-208ENST00000565810 XAGE2Q96GT9 111 aa9.54□□□□□ -0.88
CDH1-208ENST00000565810 GNL3LQ9NVN8 582 aaKnown RBP9.54□□□□□ -0.88
CDH1-208ENST00000565810 LAMB2P55268 1798 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 DCAF8L1A6NGE4 600 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 SNAP23O00161 211 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 ERC2O15083 957 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH1-208ENST00000565810 GPR162Q16538 588 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 TTC39AQ5SRH9 613 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 C16orf71Q8IYS4 520 aaPredicted RBP9.53□□□□□ -0.88
CDH1-208ENST00000565810 PSMD1Q99460 953 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 DBNDD2Q9BQY9 259 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 RTFDC1Q9BY42 306 aaPredicted RBP9.53□□□□□ -0.88
CDH1-208ENST00000565810 VPS33BQ9H267 617 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms