RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 ARAP2Q8WZ64 1704 aa13.76□□□□□ -0.21
SNX29-204ENST00000564791 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
SNX29-204ENST00000564791 IGHMBP2P38935 993 aaKnown RBP13.75□□□□□ -0.21
SNX29-204ENST00000564791 CDC5LQ99459 802 aaKnown RBP13.75□□□□□ -0.21
SNX29-204ENST00000564791 ANKRD31Q8N7Z5 1873 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 A0A1B0GUL7 405 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 TIMM10P62072 90 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 VGLL2Q8N8G2 317 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 RILPL2Q969X0 211 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 NEUROD6Q96NK8 337 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
SNX29-204ENST00000564791 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
SNX29-204ENST00000564791 ST5P78524 1137 aa13.74□□□□□ -0.21
SNX29-204ENST00000564791 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
SNX29-204ENST00000564791 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
SNX29-204ENST00000564791 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
SNX29-204ENST00000564791 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
SNX29-204ENST00000564791 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
SNX29-204ENST00000564791 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
SNX29-204ENST00000564791 PDE8BO95263 885 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 ATP5JP18859 108 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 ADORA1P30542 326 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 HELBQ8NG08 1087 aaPredicted RBP13.72□□□□□ -0.21
SNX29-204ENST00000564791 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
SNX29-204ENST00000564791 BOLA2Q9H3K6 86 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 CASC1Q6TDU7 716 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 XAGE2Q96GT9 111 aa13.72□□□□□ -0.21
SNX29-204ENST00000564791 MMP10P09238 476 aa13.71□□□□□ -0.22
SNX29-204ENST00000564791 PUM3Q15397 648 aaKnown RBP13.71□□□□□ -0.22
SNX29-204ENST00000564791 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.22
SNX29-204ENST00000564791 CCDC125Q86Z20 511 aa13.71□□□□□ -0.22
SNX29-204ENST00000564791 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.22
SNX29-204ENST00000564791 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.22
SNX29-204ENST00000564791 TAF5LO75529 589 aa13.7□□□□□ -0.22
SNX29-204ENST00000564791 FGFR2P21802 821 aa13.7□□□□□ -0.22
SNX29-204ENST00000564791 CHMLP26374 656 aa13.7□□□□□ -0.22
SNX29-204ENST00000564791 RPS8P62241 208 aaKnown RBP13.7□□□□□ -0.22
SNX29-204ENST00000564791 CHRNDQ07001 517 aa13.7□□□□□ -0.22
SNX29-204ENST00000564791 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
SNX29-204ENST00000564791 COL11A2P13942 1736 aaPredicted RBP13.69□□□□□ -0.22
SNX29-204ENST00000564791 CRY2Q49AN0 593 aa13.69□□□□□ -0.22
SNX29-204ENST00000564791 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
SNX29-204ENST00000564791 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
SNX29-204ENST00000564791 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
SNX29-204ENST00000564791 NDUFB9Q9Y6M9 179 aa13.69□□□□□ -0.22
SNX29-204ENST00000564791 GRAPQ13588 217 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 TTC39AQ5SRH9 613 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
SNX29-204ENST00000564791 LPIN2Q92539 896 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 RPGRQ92834 1020 aaKnown RBP13.68□□□□□ -0.22
SNX29-204ENST00000564791 EDC3Q96F86 508 aaKnown RBP13.68□□□□□ -0.22
SNX29-204ENST00000564791 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
SNX29-204ENST00000564791 HAUS7Q99871 368 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 MINPP1Q9UNW1 487 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 SNAP23O00161 211 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 IFIT1P09914 478 aaKnown RBP13.68□□□□□ -0.22
SNX29-204ENST00000564791 SLC5A1P13866 664 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 CCDC158Q5M9N0 1113 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
SNX29-204ENST00000564791 KLRG2A4D1S0 409 aaPredicted RBP13.67□□□□□ -0.22
SNX29-204ENST00000564791 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNX29-204ENST00000564791 PDGFDQ9GZP0 370 aaPredicted RBP13.67□□□□□ -0.22
SNX29-204ENST00000564791 EIF5BO60841 1220 aaKnown RBP13.66□□□□□ -0.22
SNX29-204ENST00000564791 ANP32AP39687 249 aaKnown RBP13.66□□□□□ -0.22
SNX29-204ENST00000564791 RBM17Q96I25 401 aaKnown RBP13.66□□□□□ -0.22
SNX29-204ENST00000564791 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
SNX29-204ENST00000564791 BRIP1Q9BX63 1249 aa13.66□□□□□ -0.22
SNX29-204ENST00000564791 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
SNX29-204ENST00000564791 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 HOXA10P31260 410 aaPredicted RBP13.65□□□□□ -0.22
SNX29-204ENST00000564791 PHKA1P46020 1223 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 SCARF1Q14162 830 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 CCDC102BQ68D86 513 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 SLC51AQ86UW1 340 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 IL25Q9H293 177 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 MYH7P12883 1935 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
SNX29-204ENST00000564791 GOLIM4O00461 696 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 MYO5AQ9Y4I1 1855 aaKnown RBP13.64□□□□□ -0.23
SNX29-204ENST00000564791 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 WTIPA6NIX2 430 aaPredicted RBP13.64□□□□□ -0.23
SNX29-204ENST00000564791 REC8O95072 547 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 ARID4AP29374 1257 aaPredicted RBP13.64□□□□□ -0.23
SNX29-204ENST00000564791 MCAMP43121 646 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 UBE4AQ14139 1066 aa13.64□□□□□ -0.23
SNX29-204ENST00000564791 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
SNX29-204ENST00000564791 HIP1O00291 1037 aa13.63□□□□□ -0.23
SNX29-204ENST00000564791 SGSM2O43147 1006 aa13.63□□□□□ -0.23
SNX29-204ENST00000564791 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
SNX29-204ENST00000564791 PDE6BP35913 854 aa13.63□□□□□ -0.23
SNX29-204ENST00000564791 ZAP70P43403 619 aa13.63□□□□□ -0.23
SNX29-204ENST00000564791 RBM25P49756 843 aaKnown RBP13.63□□□□□ -0.23
SNX29-204ENST00000564791 FKBP4Q02790 459 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms