RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 ATP5J2-PTCD1G3V325 749 aa19.02■□□□□ 0.64
VAC14-206ENST00000564685 SOX10P56693 466 aa19.02■□□□□ 0.64
VAC14-206ENST00000564685 KRT24Q2M2I5 525 aa19.02■□□□□ 0.64
VAC14-206ENST00000564685 ANKRD13DQ6ZTN6 518 aa19.02■□□□□ 0.64
VAC14-206ENST00000564685 ISCA1Q9BUE6 129 aa19.02■□□□□ 0.64
VAC14-206ENST00000564685 SLC10A3P09131 477 aa19.01■□□□□ 0.63
VAC14-206ENST00000564685 RPS8P62241 208 aaKnown RBP19.01■□□□□ 0.63
VAC14-206ENST00000564685 TBC1D16Q8TBP0 767 aa19.01■□□□□ 0.63
VAC14-206ENST00000564685 CSRNP1Q96S65 589 aa19.01■□□□□ 0.63
VAC14-206ENST00000564685 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
VAC14-206ENST00000564685 GGA3Q9NZ52 723 aa19.01■□□□□ 0.63
VAC14-206ENST00000564685 CHL1O00533 1208 aa19■□□□□ 0.63
VAC14-206ENST00000564685 VIL1P09327 827 aaKnown RBP19■□□□□ 0.63
VAC14-206ENST00000564685 RTL5Q5HYW3 569 aaPredicted RBP19■□□□□ 0.63
VAC14-206ENST00000564685 SCN9AQ15858 1988 aa19■□□□□ 0.63
VAC14-206ENST00000564685 ASTN2O75129 1339 aaPredicted RBP19■□□□□ 0.63
VAC14-206ENST00000564685 G3V3G9 751 aa18.99■□□□□ 0.63
VAC14-206ENST00000564685 DCAF8Q5TAQ9 597 aa18.99■□□□□ 0.63
VAC14-206ENST00000564685 HDGFL1Q5TGJ6 251 aa18.99■□□□□ 0.63
VAC14-206ENST00000564685 CDCA5Q96FF9 252 aa18.99■□□□□ 0.63
VAC14-206ENST00000564685 LAS1LQ9Y4W2 734 aaKnown RBP18.99■□□□□ 0.63
VAC14-206ENST00000564685 COL4A1P02462 1669 aa18.98■□□□□ 0.63
VAC14-206ENST00000564685 IRS4O14654 1257 aaPredicted RBP18.98■□□□□ 0.63
VAC14-206ENST00000564685 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
VAC14-206ENST00000564685 CTU1Q7Z7A3 348 aaKnown RBP18.98■□□□□ 0.63
VAC14-206ENST00000564685 REM2Q8IYK8 340 aaPredicted RBP18.98■□□□□ 0.63
VAC14-206ENST00000564685 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
VAC14-206ENST00000564685 UFL1O94874 794 aa18.97■□□□□ 0.63
VAC14-206ENST00000564685 TRIM28Q13263 835 aaKnown RBP18.97■□□□□ 0.63
VAC14-206ENST00000564685 PODXL2Q9NZ53 605 aa18.97■□□□□ 0.63
VAC14-206ENST00000564685 ANKIB1Q9P2G1 1089 aa18.97■□□□□ 0.63
VAC14-206ENST00000564685 HOXB7P09629 217 aa18.96■□□□□ 0.63
VAC14-206ENST00000564685 ZNF280AP59817 542 aaPredicted RBP18.96■□□□□ 0.63
VAC14-206ENST00000564685 SCARF1Q14162 830 aa18.96■□□□□ 0.63
VAC14-206ENST00000564685 ANGEL2Q5VTE6 544 aaKnown RBP18.96■□□□□ 0.63
VAC14-206ENST00000564685 RASAL3Q86YV0 1011 aa18.96■□□□□ 0.63
VAC14-206ENST00000564685 HYPKQ9NX55 129 aa18.96■□□□□ 0.63
VAC14-206ENST00000564685 RSBN1LQ6PCB5 846 aaPredicted RBP18.95■□□□□ 0.62
VAC14-206ENST00000564685 AGBL3Q8NEM8 1001 aa18.95■□□□□ 0.62
VAC14-206ENST00000564685 GGA1Q9UJY5 639 aa18.95■□□□□ 0.62
VAC14-206ENST00000564685 HSP90B1P14625 803 aaKnown RBP18.94■□□□□ 0.62
VAC14-206ENST00000564685 FKBP1BP68106 108 aa18.94■□□□□ 0.62
VAC14-206ENST00000564685 CCDC146Q8IYE0 955 aa18.94■□□□□ 0.62
VAC14-206ENST00000564685 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
VAC14-206ENST00000564685 ZBTB38Q8NAP3 1195 aaPredicted RBP18.93■□□□□ 0.62
VAC14-206ENST00000564685 USP17L8P0C7I0 530 aa18.92■□□□□ 0.62
VAC14-206ENST00000564685 RIC3Q7Z5B4 369 aa18.92■□□□□ 0.62
VAC14-206ENST00000564685 MYOZ2Q9NPC6 264 aa18.92■□□□□ 0.62
VAC14-206ENST00000564685 TRIM35Q9UPQ4 493 aa18.92■□□□□ 0.62
VAC14-206ENST00000564685 HPS5Q9UPZ3 1129 aa18.92■□□□□ 0.62
VAC14-206ENST00000564685 ZNF609O15014 1411 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 PAPPA2Q9BXP8 1791 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 RALBP1Q15311 655 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 PKN2Q16513 984 aaKnown RBP18.91■□□□□ 0.62
VAC14-206ENST00000564685 CCDC152Q4G0S7 254 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 PRPF38BQ5VTL8 546 aaKnown RBP18.91■□□□□ 0.62
VAC14-206ENST00000564685 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 GMLQ99445 158 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 HDAC9Q9UKV0 1011 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 PITPNM2Q9BZ72 1349 aa18.91■□□□□ 0.62
VAC14-206ENST00000564685 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
VAC14-206ENST00000564685 MOB2Q70IA6 237 aa18.9■□□□□ 0.62
VAC14-206ENST00000564685 PSME4Q14997 1843 aa18.9■□□□□ 0.62
VAC14-206ENST00000564685 USP17L3A6NCW0 530 aa18.89■□□□□ 0.61
VAC14-206ENST00000564685 USP17L4A6NCW7 530 aa18.89■□□□□ 0.61
VAC14-206ENST00000564685 UBE2Q2LH0YL09 131 aa18.89■□□□□ 0.61
VAC14-206ENST00000564685 USP17L1Q7RTZ2 530 aa18.89■□□□□ 0.61
VAC14-206ENST00000564685 RUNDC1Q96C34 613 aa18.89■□□□□ 0.61
VAC14-206ENST00000564685 SCAF8Q9UPN6 1271 aaKnown RBP18.89■□□□□ 0.61
VAC14-206ENST00000564685 XDHP47989 1333 aa18.89■□□□□ 0.61
VAC14-206ENST00000564685 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
VAC14-206ENST00000564685 PODNQ7Z5L7 613 aa18.88■□□□□ 0.61
VAC14-206ENST00000564685 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
VAC14-206ENST00000564685 CCDC85AQ96PX6 553 aaPredicted RBP18.88■□□□□ 0.61
VAC14-206ENST00000564685 PDE8AO60658 829 aa18.87■□□□□ 0.61
VAC14-206ENST00000564685 PCCAP05165 728 aaPredicted RBP18.87■□□□□ 0.61
VAC14-206ENST00000564685 TTLL12Q14166 644 aaPredicted RBP18.87■□□□□ 0.61
VAC14-206ENST00000564685 PRAMEF18Q5VWM3 479 aa18.87■□□□□ 0.61
VAC14-206ENST00000564685 ANKRD18AQ8IVF6 992 aa18.87■□□□□ 0.61
VAC14-206ENST00000564685 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
VAC14-206ENST00000564685 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
VAC14-206ENST00000564685 MYD88Q99836 296 aa18.87■□□□□ 0.61
VAC14-206ENST00000564685 ATP2B4P23634 1241 aa18.86■□□□□ 0.61
VAC14-206ENST00000564685 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
VAC14-206ENST00000564685 TM4SF4P48230 202 aa18.85■□□□□ 0.61
VAC14-206ENST00000564685 NBPF9Q3BBW0 867 aa18.85■□□□□ 0.61
VAC14-206ENST00000564685 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
VAC14-206ENST00000564685 CWC25Q9NXE8 425 aaPredicted RBP18.85■□□□□ 0.61
VAC14-206ENST00000564685 GPR25O00155 361 aa18.84■□□□□ 0.61
VAC14-206ENST00000564685 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
VAC14-206ENST00000564685 OGFOD1Q8N543 542 aa18.84■□□□□ 0.61
VAC14-206ENST00000564685 WTIPA6NIX2 430 aaPredicted RBP18.83■□□□□ 0.6
VAC14-206ENST00000564685 NF2P35240 595 aa18.83■□□□□ 0.6
VAC14-206ENST00000564685 MKRN3Q13064 507 aaKnown RBP18.83■□□□□ 0.6
VAC14-206ENST00000564685 NOM1Q5C9Z4 860 aaKnown RBP18.83■□□□□ 0.6
VAC14-206ENST00000564685 CDC5LQ99459 802 aaKnown RBP18.83■□□□□ 0.6
VAC14-206ENST00000564685 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
VAC14-206ENST00000564685 FBXO46Q6PJ61 603 aaPredicted RBP18.82■□□□□ 0.6
VAC14-206ENST00000564685 MXD3Q9BW11 206 aa18.82■□□□□ 0.6
VAC14-206ENST00000564685 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms