RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	PLBD2	Q8NHP8	589 aa		32.46	■■■□□ 2.79
CYLD-208	ENST00000564634	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.45	■■■□□ 2.79
CYLD-208	ENST00000564634	ZIC5	Q96T25	663 aa		32.45	■■■□□ 2.79
CYLD-208	ENST00000564634	CASP8AP2	Q9UKL3	1982 aa		32.45	■■■□□ 2.78
CYLD-208	ENST00000564634	C6orf229	H3BNL8	230 aa		32.44	■■■□□ 2.78
CYLD-208	ENST00000564634	HUNK	P57058	714 aa		32.44	■■■□□ 2.78
CYLD-208	ENST00000564634	MCOLN1	Q9GZU1	580 aa		32.44	■■■□□ 2.78
CYLD-208	ENST00000564634	HYPK	Q9NX55	129 aa		32.44	■■■□□ 2.78
CYLD-208	ENST00000564634	EGFR	P00533	1210 aa		32.43	■■■□□ 2.78
CYLD-208	ENST00000564634	GPSM2	P81274	684 aa		32.43	■■■□□ 2.78
CYLD-208	ENST00000564634	ANKRD13D	Q6ZTN6	518 aa		32.43	■■■□□ 2.78
CYLD-208	ENST00000564634	ISCA1	Q9BUE6	129 aa		32.43	■■■□□ 2.78
CYLD-208	ENST00000564634	TSPYL6	Q8N831	410 aa		32.42	■■■□□ 2.78
CYLD-208	ENST00000564634	DPF2	Q92785	391 aa		32.42	■■■□□ 2.78
CYLD-208	ENST00000564634	POLL	Q9UGP5	575 aa		32.42	■■■□□ 2.78
CYLD-208	ENST00000564634	ECE2	O60344	883 aa		32.41	■■■□□ 2.78
CYLD-208	ENST00000564634	MLLT1	Q03111	559 aa	Predicted RBP	32.41	■■■□□ 2.78
CYLD-208	ENST00000564634	SF3B3	Q15393	1217 aa	Known RBP	32.41	■■■□□ 2.78
CYLD-208	ENST00000564634	DOK7	Q18PE1	504 aa		32.41	■■■□□ 2.78
CYLD-208	ENST00000564634	NOG	Q13253	232 aa		32.4	■■■□□ 2.78
CYLD-208	ENST00000564634	RBM26	Q5T8P6	1007 aa	Known RBP	32.4	■■■□□ 2.78
CYLD-208	ENST00000564634	CCDC30	Q5VVM6	783 aa		32.4	■■■□□ 2.78
CYLD-208	ENST00000564634	KRT26	Q7Z3Y9	468 aa		32.4	■■■□□ 2.78
CYLD-208	ENST00000564634	KCNQ5	Q9NR82	932 aa		32.4	■■■□□ 2.78
CYLD-208	ENST00000564634	ADM5	C9JUS6	153 aa		32.39	■■■□□ 2.78
CYLD-208	ENST00000564634	FANCI	Q9NVI1	1328 aa		32.39	■■■□□ 2.78
CYLD-208	ENST00000564634	RTL9	Q8NET4	1388 aa		32.39	■■■□□ 2.78
CYLD-208	ENST00000564634	MIER1	Q8N108	512 aa		32.38	■■■□□ 2.77
CYLD-208	ENST00000564634	IRS4	O14654	1257 aa	Predicted RBP	32.37	■■■□□ 2.77
CYLD-208	ENST00000564634	DGKZ	Q13574	1117 aa		32.37	■■■□□ 2.77
CYLD-208	ENST00000564634	TWISTNB	Q3B726	338 aa	Predicted RBP	32.37	■■■□□ 2.77
CYLD-208	ENST00000564634	GOLGA2	Q08379	1002 aa		32.36	■■■□□ 2.77
CYLD-208	ENST00000564634	EYA3	Q99504	573 aa		32.36	■■■□□ 2.77
CYLD-208	ENST00000564634	MYH16	Q9H6N6	1097 aa		32.36	■■■□□ 2.77
CYLD-208	ENST00000564634	GBA2	Q9HCG7	927 aa	Predicted RBP	32.36	■■■□□ 2.77
CYLD-208	ENST00000564634	ZNF521	Q96K83	1311 aa		32.35	■■■□□ 2.77
CYLD-208	ENST00000564634	RPS12	P25398	132 aa	Known RBP	32.35	■■■□□ 2.77
CYLD-208	ENST00000564634	TBC1D16	Q8TBP0	767 aa		32.35	■■■□□ 2.77
CYLD-208	ENST00000564634	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.35	■■■□□ 2.77
CYLD-208	ENST00000564634	POLR2A	P24928	1970 aa	Known RBP	32.34	■■■□□ 2.77
CYLD-208	ENST00000564634	SCN9A	Q15858	1988 aa		32.34	■■■□□ 2.77
CYLD-208	ENST00000564634	RGS19	P49795	217 aa		32.34	■■■□□ 2.77
CYLD-208	ENST00000564634	DCPS	Q96C86	337 aa	Known RBP	32.34	■■■□□ 2.77
CYLD-208	ENST00000564634	FAM155A	B1AL88	458 aa	Predicted RBP	32.33	■■■□□ 2.77
CYLD-208	ENST00000564634	KIF4B	Q2VIQ3	1234 aa		32.33	■■■□□ 2.77
CYLD-208	ENST00000564634	RGMB	Q6NW40	437 aa		32.33	■■■□□ 2.77
CYLD-208	ENST00000564634	C2orf69	Q8N8R5	385 aa		32.32	■■■□□ 2.76
CYLD-208	ENST00000564634	SLC34A2	O95436	690 aa		32.31	■■■□□ 2.76
CYLD-208	ENST00000564634	RPS8	P62241	208 aa	Known RBP	32.31	■■■□□ 2.76
CYLD-208	ENST00000564634	PHAX	Q9H814	394 aa	Known RBP	32.31	■■■□□ 2.76
CYLD-208	ENST00000564634	SEC31B	Q9NQW1	1179 aa		32.31	■■■□□ 2.76
CYLD-208	ENST00000564634	GGA3	Q9NZ52	723 aa		32.31	■■■□□ 2.76
CYLD-208	ENST00000564634	ASTN2	O75129	1339 aa	Predicted RBP	32.3	■■■□□ 2.76
CYLD-208	ENST00000564634	UFL1	O94874	794 aa		32.3	■■■□□ 2.76
CYLD-208	ENST00000564634	EXOSC9	Q06265	439 aa	Known RBP	32.3	■■■□□ 2.76
CYLD-208	ENST00000564634	STK31	Q9BXU1	1019 aa		32.3	■■■□□ 2.76
CYLD-208	ENST00000564634	RIC3	Q7Z5B4	369 aa		32.29	■■■□□ 2.76
CYLD-208	ENST00000564634	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.29	■■■□□ 2.76
CYLD-208	ENST00000564634		G3V3G9	751 aa		32.28	■■■□□ 2.76
CYLD-208	ENST00000564634	ZNF157	P51786	506 aa	Predicted RBP	32.28	■■■□□ 2.76
CYLD-208	ENST00000564634	KIF23	Q02241	960 aa	Predicted RBP	32.28	■■■□□ 2.76
CYLD-208	ENST00000564634	DCAF8	Q5TAQ9	597 aa		32.28	■■■□□ 2.76
CYLD-208	ENST00000564634	VAMP4	O75379	141 aa		32.27	■■■□□ 2.76
CYLD-208	ENST00000564634	TRIM28	Q13263	835 aa	Known RBP	32.27	■■■□□ 2.76
CYLD-208	ENST00000564634	SULF1	Q8IWU6	871 aa		32.27	■■■□□ 2.76
CYLD-208	ENST00000564634	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.27	■■■□□ 2.76
CYLD-208	ENST00000564634	ANKIB1	Q9P2G1	1089 aa		32.27	■■■□□ 2.76
CYLD-208	ENST00000564634	VIL1	P09327	827 aa	Known RBP	32.25	■■■□□ 2.75
CYLD-208	ENST00000564634	CCDC102A	Q96A19	550 aa		32.25	■■■□□ 2.75
CYLD-208	ENST00000564634	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.25	■■■□□ 2.75
CYLD-208	ENST00000564634	MYD88	Q99836	296 aa		32.25	■■■□□ 2.75
CYLD-208	ENST00000564634	PODXL2	Q9NZ53	605 aa		32.25	■■■□□ 2.75
CYLD-208	ENST00000564634	GGA1	Q9UJY5	639 aa		32.25	■■■□□ 2.75
CYLD-208	ENST00000564634	DDX58	O95786	925 aa	Known RBP	32.24	■■■□□ 2.75
CYLD-208	ENST00000564634	JARID2	Q92833	1246 aa	Predicted RBP	32.24	■■■□□ 2.75
CYLD-208	ENST00000564634	CDCA5	Q96FF9	252 aa		32.23	■■■□□ 2.75
CYLD-208	ENST00000564634	TNRC18	O15417	2968 aa	Predicted RBP	32.22	■■■□□ 2.75
CYLD-208	ENST00000564634	SLC4A2	P04920	1241 aa		32.22	■■■□□ 2.75
CYLD-208	ENST00000564634	SAGE1	Q9NXZ1	904 aa		32.22	■■■□□ 2.75
CYLD-208	ENST00000564634	CACNA1F	O60840	1977 aa		32.21	■■■□□ 2.75
CYLD-208	ENST00000564634		E9PSI1	815 aa		32.21	■■■□□ 2.75
CYLD-208	ENST00000564634	TRPA1	O75762	1119 aa		32.21	■■■□□ 2.75
CYLD-208	ENST00000564634	SLC10A3	P09131	477 aa		32.21	■■■□□ 2.75
CYLD-208	ENST00000564634	CCDC152	Q4G0S7	254 aa		32.21	■■■□□ 2.75
CYLD-208	ENST00000564634	ANGEL2	Q5VTE6	544 aa	Known RBP	32.21	■■■□□ 2.75
CYLD-208	ENST00000564634	RNF186	Q9NXI6	227 aa		32.21	■■■□□ 2.75
CYLD-208	ENST00000564634	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.2	■■■□□ 2.75
CYLD-208	ENST00000564634	PSME4	Q14997	1843 aa		32.19	■■■□□ 2.74
CYLD-208	ENST00000564634	AKAP11	Q9UKA4	1901 aa		32.19	■■■□□ 2.74
CYLD-208	ENST00000564634	HSP90B1	P14625	803 aa	Known RBP	32.18	■■■□□ 2.74
CYLD-208	ENST00000564634	ZNF280A	P59817	542 aa	Predicted RBP	32.18	■■■□□ 2.74
CYLD-208	ENST00000564634	SCARF1	Q14162	830 aa		32.18	■■■□□ 2.74
CYLD-208	ENST00000564634	ZNF609	O15014	1411 aa		32.17	■■■□□ 2.74
CYLD-208	ENST00000564634	PDE8A	O60658	829 aa		32.17	■■■□□ 2.74
CYLD-208	ENST00000564634	PCCA	P05165	728 aa	Predicted RBP	32.17	■■■□□ 2.74
CYLD-208	ENST00000564634	SLFN5	Q08AF3	891 aa		32.17	■■■□□ 2.74
CYLD-208	ENST00000564634	KSR2	Q6VAB6	950 aa		32.17	■■■□□ 2.74
CYLD-208	ENST00000564634	CCDC191	Q8NCU4	936 aa		32.17	■■■□□ 2.74
CYLD-208	ENST00000564634	AGBL3	Q8NEM8	1001 aa		32.16	■■■□□ 2.74
CYLD-208	ENST00000564634	CWC25	Q9NXE8	425 aa	Predicted RBP	32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms