RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 MROH5Q6ZUA9 1318 aa23.21■■□□□ 1.31
SPNS1-206ENST00000564476 NUCB1Q02818 461 aa23.2■■□□□ 1.3
SPNS1-206ENST00000564476 CEP126Q9P2H0 1117 aa23.2■■□□□ 1.3
SPNS1-206ENST00000564476 LRRC24Q50LG9 513 aa23.19■■□□□ 1.3
SPNS1-206ENST00000564476 ANKRD45Q5TZF3 282 aa23.19■■□□□ 1.3
SPNS1-206ENST00000564476 ZNF622Q969S3 477 aaKnown RBP eCLIP23.19■■□□□ 1.3
SPNS1-206ENST00000564476 PUS3Q9BZE2 481 aaKnown RBP23.19■■□□□ 1.3
SPNS1-206ENST00000564476 GPR108Q9NPR9 543 aa23.19■■□□□ 1.3
SPNS1-206ENST00000564476 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
SPNS1-206ENST00000564476 SASH1O94885 1247 aa23.18■■□□□ 1.3
SPNS1-206ENST00000564476 ANKRD2Q9GZV1 360 aa23.18■■□□□ 1.3
SPNS1-206ENST00000564476 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
SPNS1-206ENST00000564476 COL11A2P13942 1736 aaPredicted RBP23.18■■□□□ 1.3
SPNS1-206ENST00000564476 UTRNP46939 3433 aa23.17■■□□□ 1.3
SPNS1-206ENST00000564476 CHD1LQ86WJ1 897 aa23.17■■□□□ 1.3
SPNS1-206ENST00000564476 SP8Q8IXZ3 490 aa23.17■■□□□ 1.3
SPNS1-206ENST00000564476 CLASRPQ8N2M8 674 aaKnown RBP23.17■■□□□ 1.3
SPNS1-206ENST00000564476 AKAP2Q9Y2D5 859 aa23.17■■□□□ 1.3
SPNS1-206ENST00000564476 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
SPNS1-206ENST00000564476 DPEP1P16444 411 aa23.16■■□□□ 1.3
SPNS1-206ENST00000564476 CHRNA5P30532 468 aa23.16■■□□□ 1.3
SPNS1-206ENST00000564476 GRIPAP1Q4V328 841 aa23.16■■□□□ 1.3
SPNS1-206ENST00000564476 METTL24Q5JXM2 366 aa23.16■■□□□ 1.3
SPNS1-206ENST00000564476 PIM2Q9P1W9 311 aa23.16■■□□□ 1.3
SPNS1-206ENST00000564476 MINPP1Q9UNW1 487 aa23.16■■□□□ 1.3
SPNS1-206ENST00000564476 PDE8BO95263 885 aa23.15■■□□□ 1.3
SPNS1-206ENST00000564476 KCNA3P22001 575 aa23.15■■□□□ 1.3
SPNS1-206ENST00000564476 CC2D2BQ6DHV5 1058 aa23.15■■□□□ 1.3
SPNS1-206ENST00000564476 TTLL6Q8N841 843 aa23.15■■□□□ 1.3
SPNS1-206ENST00000564476 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
SPNS1-206ENST00000564476 COL4A1P02462 1669 aa23.15■■□□□ 1.3
SPNS1-206ENST00000564476 A0A0G2JLW4 131 aa23.14■■□□□ 1.29
SPNS1-206ENST00000564476 PPEF1O14829 653 aaPredicted RBP23.14■■□□□ 1.29
SPNS1-206ENST00000564476 TFCP2Q12800 502 aa23.14■■□□□ 1.29
SPNS1-206ENST00000564476 GPR162Q16538 588 aa23.14■■□□□ 1.29
SPNS1-206ENST00000564476 APBB1O00213 710 aa23.13■■□□□ 1.29
SPNS1-206ENST00000564476 CHRNDQ07001 517 aa23.13■■□□□ 1.29
SPNS1-206ENST00000564476 VGLL2Q8N8G2 317 aa23.13■■□□□ 1.29
SPNS1-206ENST00000564476 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
SPNS1-206ENST00000564476 PRPF40BQ6NWY9 871 aaKnown RBP23.12■■□□□ 1.29
SPNS1-206ENST00000564476 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
SPNS1-206ENST00000564476 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
SPNS1-206ENST00000564476 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
SPNS1-206ENST00000564476 PODXL2Q9NZ53 605 aa23.11■■□□□ 1.29
SPNS1-206ENST00000564476 LEMD3Q9Y2U8 911 aa23.11■■□□□ 1.29
SPNS1-206ENST00000564476 PUM3Q15397 648 aaKnown RBP23.1■■□□□ 1.29
SPNS1-206ENST00000564476 TNNI3KQ59H18 835 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 SOGA3Q5TF21 947 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 C7orf43Q8WVR3 580 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 LPIN2Q92539 896 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 LNPKQ9C0E8 428 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 IL1RAPL2Q9NP60 686 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 FPGT-TNNI3KV9GXZ4 949 aa23.1■■□□□ 1.29
SPNS1-206ENST00000564476 XDHP47989 1333 aa23.09■■□□□ 1.29
SPNS1-206ENST00000564476 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
SPNS1-206ENST00000564476 GOLGB1Q14789 3259 aaKnown RBP23.09■■□□□ 1.29
SPNS1-206ENST00000564476 SMARCA5O60264 1052 aaPredicted RBP23.09■■□□□ 1.29
SPNS1-206ENST00000564476 IFIT2P09913 472 aaKnown RBP23.09■■□□□ 1.29
SPNS1-206ENST00000564476 YBX3P16989 372 aaKnown RBP eCLIP23.08■■□□□ 1.293e-6■□□□□ 8.1
SPNS1-206ENST00000564476 FGFR2P21802 821 aa23.08■■□□□ 1.29
SPNS1-206ENST00000564476 ATP2B4P23634 1241 aa23.08■■□□□ 1.29
SPNS1-206ENST00000564476 ATP2B3Q16720 1220 aa23.08■■□□□ 1.29
SPNS1-206ENST00000564476 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
SPNS1-206ENST00000564476 ANKIB1Q9P2G1 1089 aa23.08■■□□□ 1.29
SPNS1-206ENST00000564476 LRRC37AA6NMS7 1700 aa23.08■■□□□ 1.28
SPNS1-206ENST00000564476 IFIT1P09914 478 aaKnown RBP23.07■■□□□ 1.28
SPNS1-206ENST00000564476 AACSQ86V21 672 aa23.07■■□□□ 1.28
SPNS1-206ENST00000564476 HELBQ8NG08 1087 aaPredicted RBP23.07■■□□□ 1.28
SPNS1-206ENST00000564476 EAF2Q96CJ1 260 aaPredicted RBP23.07■■□□□ 1.28
SPNS1-206ENST00000564476 NSFL1CQ9UNZ2 370 aaKnown RBP23.07■■□□□ 1.28
SPNS1-206ENST00000564476 SLX4Q8IY92 1834 aa23.07■■□□□ 1.28
SPNS1-206ENST00000564476 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
SPNS1-206ENST00000564476 A0A1B0GUL7 405 aa23.06■■□□□ 1.28
SPNS1-206ENST00000564476 SLC5A1P13866 664 aa23.06■■□□□ 1.28
SPNS1-206ENST00000564476 RTKN2Q8IZC4 609 aa23.06■■□□□ 1.28
SPNS1-206ENST00000564476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.06■■□□□ 1.28
SPNS1-206ENST00000564476 TAF5LO75529 589 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 KCNJ4P48050 445 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 TIMM10P62072 90 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 GPSM2P81274 684 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 MPNDQ8N594 471 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 GPATCH3Q96I76 525 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 GGA1Q9UJY5 639 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 ZNF804BA4D1E1 1349 aa23.05■■□□□ 1.28
SPNS1-206ENST00000564476 C15orf52Q6ZUT6 534 aaKnown RBP23.04■■□□□ 1.28
SPNS1-206ENST00000564476 NEUROD6Q96NK8 337 aa23.04■■□□□ 1.28
SPNS1-206ENST00000564476 OSBPL3Q9H4L5 887 aa23.04■■□□□ 1.28
SPNS1-206ENST00000564476 CCDC93Q567U6 631 aa23.03■■□□□ 1.28
SPNS1-206ENST00000564476 DPP8Q6V1X1 898 aaPredicted RBP23.03■■□□□ 1.28
SPNS1-206ENST00000564476 C16orf71Q8IYS4 520 aaPredicted RBP23.03■■□□□ 1.28
SPNS1-206ENST00000564476 SUPT20HQ8NEM7 779 aa23.03■■□□□ 1.28
SPNS1-206ENST00000564476 STAP2Q9UGK3 403 aa23.03■■□□□ 1.28
SPNS1-206ENST00000564476 PDE4AP27815 886 aa23.02■■□□□ 1.28
SPNS1-206ENST00000564476 ZNF784Q8NCA9 323 aaPredicted RBP23.02■■□□□ 1.28
SPNS1-206ENST00000564476 XAGE2Q96GT9 111 aa23.02■■□□□ 1.28
SPNS1-206ENST00000564476 RTFDC1Q9BY42 306 aaPredicted RBP23.02■■□□□ 1.28
SPNS1-206ENST00000564476 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
SPNS1-206ENST00000564476 TTC41PQ6P2S7 1318 aa23.02■■□□□ 1.28
SPNS1-206ENST00000564476 ZNF609O15014 1411 aa23.01■■□□□ 1.27
SPNS1-206ENST00000564476 ZBTB22O15209 634 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms