RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 IGKV5-2P06315 115 aa30.72■■■□□ 2.51
NME3-206ENST00000564252 DOK7Q18PE1 504 aa30.72■■■□□ 2.51
NME3-206ENST00000564252 PI4KAP1Q8N8J0 262 aa30.72■■■□□ 2.51
NME3-206ENST00000564252 PRDM10Q9NQV6 1147 aa30.72■■■□□ 2.51
NME3-206ENST00000564252 KCNQ5Q9NR82 932 aa30.72■■■□□ 2.51
NME3-206ENST00000564252 TWISTNBQ3B726 338 aaPredicted RBP30.71■■■□□ 2.51
NME3-206ENST00000564252 CAPNS2Q96L46 248 aa30.71■■■□□ 2.51
NME3-206ENST00000564252 CCDC85AQ96PX6 553 aaPredicted RBP30.71■■■□□ 2.51
NME3-206ENST00000564252 STK31Q9BXU1 1019 aa30.71■■■□□ 2.51
NME3-206ENST00000564252 IL16Q14005 1332 aa30.71■■■□□ 2.51
NME3-206ENST00000564252 CELF2O95319 508 aaKnown RBP30.7■■■□□ 2.51
NME3-206ENST00000564252 NCBP3Q53F19 620 aaKnown RBP30.7■■■□□ 2.51
NME3-206ENST00000564252 SCN9AQ15858 1988 aa30.7■■■□□ 2.5
NME3-206ENST00000564252 UFL1O94874 794 aa30.69■■■□□ 2.5
NME3-206ENST00000564252 MAP2K1Q02750 393 aaPredicted RBP30.69■■■□□ 2.5
NME3-206ENST00000564252 CYP4F22Q6NT55 531 aa30.69■■■□□ 2.5
NME3-206ENST00000564252 ZC3H12CQ9C0D7 883 aaKnown RBP30.69■■■□□ 2.5
NME3-206ENST00000564252 ANKIB1Q9P2G1 1089 aa30.69■■■□□ 2.5
NME3-206ENST00000564252 RPS12P25398 132 aaKnown RBP30.68■■■□□ 2.5
NME3-206ENST00000564252 ECE1P42892 770 aa30.68■■■□□ 2.5
NME3-206ENST00000564252 PAXIP1Q6ZW49 1069 aaPredicted RBP30.68■■■□□ 2.5
NME3-206ENST00000564252 G2E3Q7L622 706 aa30.68■■■□□ 2.5
NME3-206ENST00000564252 GGA1Q9UJY5 639 aa30.68■■■□□ 2.5
NME3-206ENST00000564252 CDC37L1Q7L3B6 337 aa30.67■■■□□ 2.5
NME3-206ENST00000564252 SAMD7Q7Z3H4 446 aa30.67■■■□□ 2.5
NME3-206ENST00000564252 SAPCD2Q86UD0 394 aa30.67■■■□□ 2.5
NME3-206ENST00000564252 MRS2Q9HD23 443 aa30.67■■■□□ 2.5
NME3-206ENST00000564252 CTSWP56202 376 aa30.66■■■□□ 2.5
NME3-206ENST00000564252 ANKRD18AQ8IVF6 992 aa30.66■■■□□ 2.5
NME3-206ENST00000564252 MYH3P11055 1940 aa30.66■■■□□ 2.5
NME3-206ENST00000564252 EGFRP00533 1210 aa30.65■■■□□ 2.5
NME3-206ENST00000564252 LBX1P52954 281 aa30.65■■■□□ 2.5
NME3-206ENST00000564252 NEXNQ0ZGT2 675 aa30.65■■■□□ 2.5
NME3-206ENST00000564252 CWF19L2Q2TBE0 894 aaKnown RBP30.65■■■□□ 2.5
NME3-206ENST00000564252 TBC1D10BQ4KMP7 808 aaPredicted RBP30.65■■■□□ 2.5
NME3-206ENST00000564252 NEURL1BA8MQ27 555 aa30.64■■■□□ 2.5
NME3-206ENST00000564252 SLC4A2P04920 1241 aa30.64■■■□□ 2.5
NME3-206ENST00000564252 VIL1P09327 827 aaKnown RBP30.64■■■□□ 2.5
NME3-206ENST00000564252 HSPA8P11142 646 aaKnown RBP30.64■■■□□ 2.5
NME3-206ENST00000564252 ZEB1P37275 1124 aaPredicted RBP30.64■■■□□ 2.5
NME3-206ENST00000564252 GRM1Q13255 1194 aa30.64■■■□□ 2.5
NME3-206ENST00000564252 TTLL11Q8NHH1 800 aa30.64■■■□□ 2.5
NME3-206ENST00000564252 XDHP47989 1333 aa30.64■■■□□ 2.5
NME3-206ENST00000564252 USP48Q86UV5 1035 aa30.62■■■□□ 2.49
NME3-206ENST00000564252 HHIPL1Q96JK4 782 aa30.62■■■□□ 2.49
NME3-206ENST00000564252 CDC5LQ99459 802 aaKnown RBP30.62■■■□□ 2.49
NME3-206ENST00000564252 ZNF408Q9H9D4 720 aa30.62■■■□□ 2.49
NME3-206ENST00000564252 FANCIQ9NVI1 1328 aa30.62■■■□□ 2.49
NME3-206ENST00000564252 PSME4Q14997 1843 aa30.61■■■□□ 2.49
NME3-206ENST00000564252 GREM2Q9H772 168 aa30.61■■■□□ 2.49
NME3-206ENST00000564252 G3V3G9 751 aa30.6■■■□□ 2.49
NME3-206ENST00000564252 ZNF609O15014 1411 aa30.6■■■□□ 2.49
NME3-206ENST00000564252 ANP32CO43423 234 aa30.6■■■□□ 2.49
NME3-206ENST00000564252 DCAF8Q5TAQ9 597 aa30.6■■■□□ 2.49
NME3-206ENST00000564252 DLK2Q6UY11 383 aa30.6■■■□□ 2.49
NME3-206ENST00000564252 SPEF2Q9C093 1822 aa30.6■■■□□ 2.49
NME3-206ENST00000564252 H7C1W4 665 aa30.59■■■□□ 2.49
NME3-206ENST00000564252 AOC2O75106 756 aa30.59■■■□□ 2.49
NME3-206ENST00000564252 FLIIQ13045 1269 aa30.59■■■□□ 2.49
NME3-206ENST00000564252 POLR2AP24928 1970 aaKnown RBP30.58■■■□□ 2.49
NME3-206ENST00000564252 ATP2B4P23634 1241 aa30.58■■■□□ 2.49
NME3-206ENST00000564252 MAP2K2P36507 400 aa30.58■■■□□ 2.49
NME3-206ENST00000564252 RBM26Q5T8P6 1007 aaKnown RBP30.58■■■□□ 2.49
NME3-206ENST00000564252 UBE3BQ7Z3V4 1068 aa30.58■■■□□ 2.49
NME3-206ENST00000564252 BSDC1Q9NW68 430 aaPredicted RBP30.58■■■□□ 2.49
NME3-206ENST00000564252 ZNF316A6NFI3 1004 aaPredicted RBP30.57■■■□□ 2.48
NME3-206ENST00000564252 KIF4BQ2VIQ3 1234 aa30.57■■■□□ 2.48
NME3-206ENST00000564252 KRT26Q7Z3Y9 468 aa30.57■■■□□ 2.48
NME3-206ENST00000564252 WDR63Q8IWG1 891 aa30.57■■■□□ 2.48
NME3-206ENST00000564252 MINPP1Q9UNW1 487 aa30.57■■■□□ 2.48
NME3-206ENST00000564252 CACNA1FO60840 1977 aa30.57■■■□□ 2.48
NME3-206ENST00000564252 WTIPA6NIX2 430 aaPredicted RBP30.56■■■□□ 2.48
NME3-206ENST00000564252 GCKRQ14397 625 aa30.56■■■□□ 2.48
NME3-206ENST00000564252 RSBN1LQ6PCB5 846 aaPredicted RBP30.56■■■□□ 2.48
NME3-206ENST00000564252 SALL2Q9Y467 1007 aaPredicted RBP30.56■■■□□ 2.48
NME3-206ENST00000564252 VAMP4O75379 141 aa30.55■■■□□ 2.48
NME3-206ENST00000564252 ADM5C9JUS6 153 aa30.54■■■□□ 2.48
NME3-206ENST00000564252 ZNF280AP59817 542 aaPredicted RBP30.54■■■□□ 2.48
NME3-206ENST00000564252 FKBP5Q13451 457 aaPredicted RBP30.54■■■□□ 2.48
NME3-206ENST00000564252 AGBL3Q8NEM8 1001 aa30.54■■■□□ 2.48
NME3-206ENST00000564252 DNAAF4Q8WXU2 420 aa30.54■■■□□ 2.48
NME3-206ENST00000564252 DCPSQ96C86 337 aaKnown RBP30.54■■■□□ 2.48
NME3-206ENST00000564252 BEGAINQ9BUH8 593 aa30.54■■■□□ 2.48
NME3-206ENST00000564252 PLA2G12BQ9BX93 195 aa30.54■■■□□ 2.48
NME3-206ENST00000564252 MED23Q9ULK4 1368 aa30.54■■■□□ 2.48
NME3-206ENST00000564252 CASP7P55210 303 aa30.53■■■□□ 2.48
NME3-206ENST00000564252 PODNQ7Z5L7 613 aa30.53■■■□□ 2.48
NME3-206ENST00000564252 GMLQ99445 158 aa30.53■■■□□ 2.48
NME3-206ENST00000564252 EXOSC9Q06265 439 aaKnown RBP30.52■■■□□ 2.48
NME3-206ENST00000564252 CCT4P50991 539 aaKnown RBP30.51■■■□□ 2.47
NME3-206ENST00000564252 HUNKP57058 714 aa30.51■■■□□ 2.47
NME3-206ENST00000564252 LINS1Q8NG48 757 aa30.51■■■□□ 2.47
NME3-206ENST00000564252 MYH16Q9H6N6 1097 aa30.51■■■□□ 2.47
NME3-206ENST00000564252 GGA3Q9NZ52 723 aa30.51■■■□□ 2.47
NME3-206ENST00000564252 ASTN2O75129 1339 aaPredicted RBP30.5■■■□□ 2.47
NME3-206ENST00000564252 USP17L3A6NCW0 530 aa30.5■■■□□ 2.47
NME3-206ENST00000564252 USP17L4A6NCW7 530 aa30.5■■■□□ 2.47
NME3-206ENST00000564252 USP17L1Q7RTZ2 530 aa30.5■■■□□ 2.47
NME3-206ENST00000564252 BRPF1P55201 1214 aaPredicted RBP30.49■■■□□ 2.47
NME3-206ENST00000564252 SPINK5Q9NQ38 1064 aaPredicted RBP30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms