RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 CYP4F22Q6NT55 531 aa10.16□□□□□ -0.78
TCF4-221ENST00000563888 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
TCF4-221ENST00000563888 CNTROBQ8N137 903 aa10.16□□□□□ -0.78
TCF4-221ENST00000563888 ZNF622Q969S3 477 aaKnown RBP eCLIP10.16□□□□□ -0.785e-7■□□□□ 11.2
TCF4-221ENST00000563888 CAPNS2Q96L46 248 aa10.16□□□□□ -0.78
TCF4-221ENST00000563888 ARID3AQ99856 593 aa10.16□□□□□ -0.78
TCF4-221ENST00000563888 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
TCF4-221ENST00000563888 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
TCF4-221ENST00000563888 A0A1W2PP64 1363 aa10.15□□□□□ -0.78
TCF4-221ENST00000563888 CNTNAP4Q9C0A0 1308 aa10.15□□□□□ -0.78
TCF4-221ENST00000563888 USP42Q9H9J4 1324 aaKnown RBP10.15□□□□□ -0.78
TCF4-221ENST00000563888 ZPR1O75312 459 aa10.15□□□□□ -0.78
TCF4-221ENST00000563888 BCAMP50895 628 aa10.15□□□□□ -0.78
TCF4-221ENST00000563888 USPL1Q5W0Q7 1092 aa10.15□□□□□ -0.78
TCF4-221ENST00000563888 MTMR14Q8NCE2 650 aa10.15□□□□□ -0.78
TCF4-221ENST00000563888 A0A0C4DFX4 3053 aa10.15□□□□□ -0.79
TCF4-221ENST00000563888 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
TCF4-221ENST00000563888 AOC2O75106 756 aa10.14□□□□□ -0.79
TCF4-221ENST00000563888 PTCD1O75127 700 aaKnown RBP10.14□□□□□ -0.79
TCF4-221ENST00000563888 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
TCF4-221ENST00000563888 MORN1Q5T089 497 aa10.14□□□□□ -0.79
TCF4-221ENST00000563888 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
TCF4-221ENST00000563888 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
TCF4-221ENST00000563888 MON2Q7Z3U7 1717 aa10.13□□□□□ -0.79
TCF4-221ENST00000563888 ECE1P42892 770 aa10.13□□□□□ -0.79
TCF4-221ENST00000563888 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
TCF4-221ENST00000563888 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
TCF4-221ENST00000563888 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
TCF4-221ENST00000563888 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
TCF4-221ENST00000563888 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
TCF4-221ENST00000563888 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
TCF4-221ENST00000563888 SERPINB2P05120 415 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 PHKG2P15735 406 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 ABL2P42684 1182 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
TCF4-221ENST00000563888 NFIXQ14938 502 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 GGNBP2Q9H3C7 697 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 HACL1Q9UJ83 578 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 RTL1A6NKG5 1358 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 ROCK2O75116 1388 aaKnown RBP10.12□□□□□ -0.79
TCF4-221ENST00000563888 KDRP35968 1356 aa10.12□□□□□ -0.79
TCF4-221ENST00000563888 NR1I2O75469 434 aa10.11□□□□□ -0.79
TCF4-221ENST00000563888 EPHX2P34913 555 aa10.11□□□□□ -0.79
TCF4-221ENST00000563888 RETREG3Q86VR2 466 aa10.11□□□□□ -0.79
TCF4-221ENST00000563888 DDX21Q9NR30 783 aaKnown RBP eCLIP10.11□□□□□ -0.79
TCF4-221ENST00000563888 ITGB4P16144 1822 aa10.11□□□□□ -0.79
TCF4-221ENST00000563888 TIAM2Q8IVF5 1701 aa10.1□□□□□ -0.79
TCF4-221ENST00000563888 CFAP99D6REC4 459 aa10.1□□□□□ -0.79
TCF4-221ENST00000563888 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
TCF4-221ENST00000563888 BICDL1Q6ZP65 573 aa10.1□□□□□ -0.79
TCF4-221ENST00000563888 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
TCF4-221ENST00000563888 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
TCF4-221ENST00000563888 INSRP06213 1382 aa10.1□□□□□ -0.79
TCF4-221ENST00000563888 MAP2K2P36507 400 aa10.09□□□□□ -0.79
TCF4-221ENST00000563888 PNMA8AQ86V59 439 aaPredicted RBP10.09□□□□□ -0.79
TCF4-221ENST00000563888 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
TCF4-221ENST00000563888 VIRMAQ69YN4 1812 aaKnown RBP10.09□□□□□ -0.79
TCF4-221ENST00000563888 ERVV-2B6SEH9 535 aa10.08□□□□□ -0.8
TCF4-221ENST00000563888 CA12O43570 354 aa10.08□□□□□ -0.8
TCF4-221ENST00000563888 CABP4P57796 275 aa10.08□□□□□ -0.8
TCF4-221ENST00000563888 INTS5Q6P9B9 1019 aaKnown RBP10.08□□□□□ -0.8
TCF4-221ENST00000563888 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
TCF4-221ENST00000563888 TBC1D2BQ9UPU7 963 aa10.08□□□□□ -0.8
TCF4-221ENST00000563888 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 CARMIL3Q8ND23 1372 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 TRAF5O00463 557 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 FYB1O15117 783 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
TCF4-221ENST00000563888 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
TCF4-221ENST00000563888 PLA2G2EQ9NZK7 142 aa10.07□□□□□ -0.8
TCF4-221ENST00000563888 FLT4P35916 1363 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 PTPN5P54829 565 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
TCF4-221ENST00000563888 CST9Q5W186 159 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 GCC1Q96CN9 775 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 CCDC97Q96F63 343 aaPredicted RBP10.06□□□□□ -0.8
TCF4-221ENST00000563888 SALL2Q9Y467 1007 aaPredicted RBP10.06□□□□□ -0.8
TCF4-221ENST00000563888 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 LTBP3Q9NS15 1303 aa10.06□□□□□ -0.8
TCF4-221ENST00000563888 PDE6BP35913 854 aa10.05□□□□□ -0.8
TCF4-221ENST00000563888 BLOC1S3Q6QNY0 202 aa10.05□□□□□ -0.8
TCF4-221ENST00000563888 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
TCF4-221ENST00000563888 ZNF277Q9NRM2 450 aaPredicted RBP10.05□□□□□ -0.8
TCF4-221ENST00000563888 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
TCF4-221ENST00000563888 TLL2Q9Y6L7 1015 aa10.05□□□□□ -0.8
TCF4-221ENST00000563888 DESI1Q6ICB0 168 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
TCF4-221ENST00000563888 BRICD5Q6PL45 260 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 RNF19BQ6ZMZ0 732 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 DNAJC10Q8IXB1 793 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 NFATC2IPQ8NCF5 419 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
TCF4-221ENST00000563888 BRIP1Q9BX63 1249 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms